Contig 009102:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS127C01Sequence606009102 (2)ref|XP_011084290.1|1e-22PREDICTED: U-box domain-containing protein 14 [Sesamum indicum]
JMSF032D09Sequence724009102 (2)ref|XP_009594953.1|5e-70PREDICTED: U-box domain-containing protein 14 [Nicotiana tomentosiformis]743024616ref|XP_009760654.1|1e-89PREDICTED: U-box domain-containing protein 14 [Nicotiana sylvestris]

Alignment

This contig is upended


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JMSF032D09+                                                 CATCAGACGAGATGACCATATC
                      ____________________________________________________________
consensus                                                   CATCAGACGAGATGACCATATC
 
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JMSF032D09+           ATGGATGGAAATCGATTCCTTCTTAAGGTCGTTTATGGTCCTGAGATGCAACTTTTCCGA
                      ____________________________________________________________
consensus             ATGGATGGAAATCGATTCCTTCTTAAGGTCGTTTATGGTCCTGAGATGCAACTTTTCCGA
 
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JMSF032D09+           TAGCCGTTTAAAGATTATAGGGTCAGGATCTTTTTCTCTTTGTGCCATGGCTAAATCAAT
                      ____________________________________________________________
consensus             TAGCCGTTTAAAGATTATAGGGTCAGGATCTTTTTCTCTTTGTGCCATGGCTAAATCAAT
 
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JMSF032D09+           TGCGAGTTGTAAATCAGGTGAGTCCATCCTCCCGACCGCTCTTTTGAATTGAGCATGCAC
                      ____________________________________________________________
consensus             TGCGAGTTGTAAATCAGGTGAGTCCATCCTCCCGACCGCTCTTTTGAATTGAGCATGCAC
 
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JMSF032D09+           AAGTTCAATCTGAAACGAAGGCGTGTGAAAAATAGTTGGTTAGAAAGCAAACACCAATTT
                      ____________________________________________________________
consensus             AAGTTCAATCTGAAACGAAGGCGTGTGAAAAATAGTTGGTTAGAAAGCAAACACCAATTT
 
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JMSF032D09+           GTACTTCCGAATGCAACTTAATTCTTCAAACGAAAATGAATAAATGGGTACTTGCTCTCG
                      ____________________________________________________________
consensus             GTACTTCCGAATGCAACTTAATTCTTCAAACGAAAATGAATAAATGGGTACTTGCTCTCG
 
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JMSF032D09+           AACTTCCTCTGATATATCAAGTTTATCATAAGGAATGTGACCTAGTGCATCTTCTATCTC
JMFS127C01+                                                                 TATCTC
                      ____________________________________________________________
consensus             AACTTCCTCTGATATATCAAGTTTATCATAAGGAATGTGACCTAGTGCATCTTCTATCTC
 
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JMSF032D09+           TTCTGTAATATGATGAAACTTGCCTGAAATTTTATCTATTTGCATAGCCTGAAAAATCTT
JMFS127C01+           TTCTGTAATATGATGAAACTTGCCTGAAATTTTATCTATTTGCATAGCCTGAAAAATCTT
                      ____________________________________________________________
consensus             TTCTGTAATATGATGAAACTTGCCTGAAATTTTATCTATTTGCATAGCCTGAAAAATCTT
 
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JMSF032D09+           ACTGCCCTCGTGGACTGATTTAAGAAGCTCTAGAGCTGAGCCAAGAGCGAGCCTCAACAA
JMFS127C01+           ACTGCCCTCGTGGACTGATTTAAGAAGCTCTAGAGCTGAGCCAAGAGCGAGCCTCAACAA
                      ____________________________________________________________
consensus             ACTGCCCTCGTGGACTGATTTAAGAAGCTCTAGAGCTGAGCCAAGAGCGAGCCTCAACAA
 
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JMSF032D09+           CTCAAGCCCGTTAACGACGTCGTCTCCGAGCTTATCTCCGTCATCACTATCCTTCAAATC
JMFS127C01+           CTCAAGCCCGTTAACGACGTCGTCTCCGAGCTTATCTCCGTCATCACTATCCTTCAAATC
                      ____________________________________________________________
consensus             CTCAAGCCCGTTAACGACGTCGTCTCCGAGCTTATCTCCGTCATCACTATCCTTCAAATC
 
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JMSF032D09+           CTCAAACAGAGGACTCAAAAGCTTCACCCTGCGCACCAAATTACTGTACATCTTTTTGGA
JMFS127C01+           CTCAAACAGAGGACTCAAAAGCTTCACCCTGCGCACCAAATTACTGTACATCTTTTTGGA
                      ____________________________________________________________
consensus             CTCAAACAGAGGACTCAAAAGCTTCACCCTGCGCACCAAATTACTGTACATCTTTTTGGA
 
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JMSF032D09+           GACCGTCTGGCACTCGGGCAACGATGAAATGGCCGCGATTAACTCGGTGAGTTGACACAG
JMFS127C01+           GACCGTCTGGCACTCGGGCAACGATGAAATGGCCGCGATTAACTCGGTGAGTTGACACAG
                      ____________________________________________________________
consensus             GACCGTCTGGCACTCGGGCAACGATGAAATGGCCGCGATTAACTCGGTGAGTTGACACAG
 
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JMSF032D09+           TAGAGCCTCCTTTTGAGGATCCATATTGCGTTCTAACCAAG                   
JMFS127C01+           TAGAGCCTCCTTTTGAGGATCCATATTGCGTTCTAACCAAGACTTCAAGAGAAGCTTGAA
                      ____________________________________________________________
consensus             TAGAGCCTCCTTTTGAGGATCCATATTGCGTTCTAACCAAGACTTCAAGAGAAGCTTGAA
 
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JMFS127C01+           AAGTCGGGTTTTATACGGTTCGTAGGCACCCGGTTGGCTCAATTACGCGTTCTCGACGAA
                      ____________________________________________________________
consensus             AAGTCGGGTTTTATACGGTTCGTAGGCACCCGGTTGGCTCAATTACGCGTTCTCGACGAA
 
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JMFS127C01+           GGCCGGGTTGACTAAACAACCCTAGAAATTGGGTGAGAAATCAACAAAAAAAGCTTACGA
                      ____________________________________________________________
consensus             GGCCGGGTTGACTAAACAACCCTAGAAATTGGGTGAGAAATCAACAAAAAAAGCTTACGA
 
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JMFS127C01+           ATTTGGGTTACCTGAGCTGATTTAAAAAAACCCAGACGCAAAAATTGGTTGAATTTCAAG
                      ____________________________________________________________
consensus             ATTTGGGTTACCTGAGCTGATTTAAAAAAACCCAGACGCAAAAATTGGTTGAATTTCAAG
 
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JMFS127C01+           AATTTGGAGAACAGAAATCAAATGTACGTGTAAAAATCGCGAGAAAAGAAACCAATCTTT
                      ____________________________________________________________
consensus             AATTTGGAGAACAGAAATCAAATGTACGTGTAAAAATCGCGAGAAAAGAAACCAATCTTT