Contig 009095:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS018D08Sequence618009095 (4)ref|XP_006341293.1|6e-43PREDICTED: receptor-like protein kinase FERONIA-like [Solanum tuberosum]
JMFS088B03Sequence627009095 (4)ref|XP_006341293.1|1e-69PREDICTED: receptor-like protein kinase FERONIA-like [Solanum tuberosum]
JMFS124C05Sequence590009095 (4)gb|EYU42039.1|2e-30hypothetical protein MIMGU_mgv1a001343mg [Erythranthe guttata]
JMFS167B02Sequence627009095 (4)ref|XP_006341293.1|1e-43PREDICTED: receptor-like protein kinase FERONIA-like [Solanum tuberosum]

Alignment

This contig is upended


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JMFS088B03+                                               TTATATATATCAGGATGCCCAACG
                      ____________________________________________________________
consensus                                                 TTATATATATCAGGATGCCCAACG
 
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JMFS088B03+           ACCTCAATCCCATTCACAAACGCAAAAGAGTTGGAATAGTTCCCAGAAGGCGTGAAAGTC
                      ____________________________________________________________
consensus             ACCTCAATCCCATTCACAAACGCAAAAGAGTTGGAATAGTTCCCAGAAGGCGTGAAAGTC
 
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JMFS088B03+           ACATTCAACACTCCAGACGGAACATTGATGGAGAACTCCTTTAATACGTAATCAAAGAAC
JMFS018D08+                                                                      C
JMFS167B02+                                                              TCAAAGAAC
                      ____________________________________________________________
consensus             ACATTCAACACTCCAGACGGAACATTGATGGAGAACTCCTTTAATACGTAATCAAAGAAC
 
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JMFS088B03+           AGAGCTTCAGTGGTTTGTGCTGCACTGAAGTTCCTCAGAAGGGTATACTGACCAACCCTA
JMFS018D08+           AGAGCTTCAGTGGTNTGTGCTGCACTGAAGTTCCTCAGAAGGGTATACTGACCAACCCTA
JMFS167B02+           AGAGCTTCAGTGGTTTGTGCTGCACTGAAGTTCCTCAGAAGGGTATACTGACCAACCCTA
                      ____________________________________________________________
consensus             AGAGCTTCAGTGGTTTGTGCTGCACTGAAGTTCCTCAGAAGGGTATACTGACCAACCCTA
 
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JMFS088B03+           ACTGAGAAGATCCCATTGTAGGGATTGAGCTTATTGTAAACTGCAGGATAGAAATAGAGG
JMFS018D08+           ACTGAGAAGATCCCATTGTAGGGATTGAGCTTATTGTAAACTGCAGGATAGAAATAGAGG
JMFS167B02+           ACTGAGAAGATCCCATTGTAGGGATTGAGCTTATTGTAAACTGCAGGATAGAAATAGAGG
JMFS124C05+                     TCCCATTGTAGGGATTGAGCTTATTGTAAACTGCAGGATAGAAATAGAGG
                      ____________________________________________________________
consensus             ACTGAGAAGATCCCATTGTAGGGATTGAGCTTATTGTAAACTGCAGGATAGAAATAGAGG
 
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JMFS088B03+           CGAAGAAACTTCCTTCCAGATGATACTGGGAAACTATAGGTGAACTCGGATTGGAAAACC
JMFS018D08+           CGAAGAAACTTCCTTCCAGATGATACTGGGAAACTATAGGTGAACTCGGATTGGAAAACC
JMFS167B02+           CGAAGAAACTTCCTTCCAGATGATACTGGGAAACTATAGGTGAACTCGGATTGGAAAACC
JMFS124C05+           CGAAGAAACTTCCTTCCAGATGATACTGGGAAACTATAGGTGAACTCGGATTGGAAAACC
                      ____________________________________________________________
consensus             CGAAGAAACTTCCTTCCAGATGATACTGGGAAACTATAGGTGAACTCGGATTGGAAAACC
 
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JMFS088B03+           CGGGCATCCATGCAAGGGACTTGAGGAACAGAGGGCTTTTGGGAATCAGCAGGGGATGGA
JMFS018D08+           CGGGCATCCATGCAAGGGACTTGAGGAACAGAGGGCTTTTGGGAATCAGCAGGGGATGGA
JMFS167B02+           CGGGCATCCATGCAAGGGACTTGAGGAACAGAGGGCTTTTGGGAATCAGCAGGGGATGGA
JMFS124C05+           CGGGCATCCATGCAAGGGACTTGAGGAACAGAGGGCTTTTGGGAATCAGCAGGGGATGGA
                      ____________________________________________________________
consensus             CGGGCATCCATGCAAGGGACTTGAGGAACAGAGGGCTTTTGGGAATCAGCAGGGGATGGA
 
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JMFS088B03+           AATGACTTTCCACTGCTCATTAGGAATTTAGACCCAATATCTGTACTCCATTCTCGGCCA
JMFS018D08+           AATGACTTTCCACTGCTCATTAGGAATTTAGACCCAATATCTGTACTCCATTCTCGGCCA
JMFS167B02+           AATGACTTTCCACTGCTCATTAGGAATTTAGACCCAATATCTGTACTCCATTCTCGGCCA
JMFS124C05+           AATGACTTTCCACTGCTCATTAGGAATTTAGACCCAATATCTGTACTCCATTCTCGGCCA
                      ____________________________________________________________
consensus             AATGACTTTCCACTGCTCATTAGGAATTTAGACCCAATATCTGTACTCCATTCTCGGCCA
 
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JMFS088B03+           TATTCATCAGTGCTCCGATTAGGACCTCCACAACTTAACAGAACCTCAATCTGCCCAGAC
JMFS018D08+           TATTCATCAGTGCTCCGATTAGGACCTCCACAACTTAACAGAACCTCAATCTGCCCAGAC
JMFS167B02+           TATTCATCAGTGCTCCGATTAGGACCTCCACAACTTAACAGAACCTCAATCTGCCCAGAC
JMFS124C05+           TATTCATCAGTGCTCCGATTAGGACCTCCACAACTTAACAGAACCTCAATCTGCCCAGAC
                      ____________________________________________________________
consensus             TATTCATCAGTGCTCCGATTAGGACCTCCACAACTTAACAGAACCTCAATCTGCCCAGAC
 
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JMFS088B03+           ACTTGAACCAGGGCAAGTAACAGACAGCTCAAGATCAAAAGAACAAACAGTTTATAGGCA
JMFS018D08+           ACTTGAACCAGGGCAAGTAACAGACAGCTCAAGATCAAAAGAACAAACAGTTTATAGGCA
JMFS167B02+           ACTTGAACCAGGGCAAGTAACAGACAGCTCAAGATCAAAAGAACAAACAGTTTATAGGCA
JMFS124C05+           ACTTGAACCAGGGCAAGTAACAGACAGCTCAAGATCAAAAGAACAAACAGTTTATAGGCA
                      ____________________________________________________________
consensus             ACTTGAACCAGGGCAAGTAACAGACAGCTCAAGATCAAAAGAACAAACAGTTTATAGGCA
 
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JMFS088B03+           GCCATTTACCACGCAGATTATCGCGGAAAACACGAAATTTCTGAGGGAAGAGCAAGGATA
JMFS018D08+           GCCATTTACCACGCAGATTATCGCGGAAAACACGAAATTTCTGAGGGAAGAGCAAGGATA
JMFS167B02+           GCCATTTACCACGCAGATTATCGCGGAAAACACGAAATTTCTGAGGGAAGAGCAAGGATA
JMFS124C05+           GCCATTTACCACGCAGATTATCGCGGAAAACACGAAATTTCTGAGGGAAGAGCAAGGATA
                      ____________________________________________________________
consensus             GCCATTTACCACGCAGATTATCGCGGAAAACACGAAATTTCTGAGGGAAGAGCAAGGATA
 
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JMFS088B03+           GAA                                                         
JMFS018D08+           GAAGTAGAGATCAAAATCCCAATGAAAAGGCAAACTTCAAGCCACGATAGGGCTCATCCC
JMFS167B02+           GAAGTAGAGATCAAAATCCCAATGAAAAGGCAAACTTCAAGCCACGATAGGGCTCATCCC
JMFS124C05+           GAAGTAGAGATCAAAATCCCAATGAAAAGGCAAACTTCAAGCCACGATAGGGCTCATCCC
                      ____________________________________________________________
consensus             GAAGTAGAGATCAAAATCCCAATGAAAAGGCAAACTTCAAGCCACGATAGGGCTCATCCC
 
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JMFS018D08+           TTAAACTCAATGCCGTATTACAATCAGACAAGAGCTGGAAATGGGGAGACAGAGTCAGAT
JMFS167B02+           TTAAACTCAATGCCGTATTACAATCAGACAAGAGCTGGAAATGGGGAGACAGAGTCAGAT
JMFS124C05+           TTAAACTCAATGCCGTATTACAATCAGACAAGAGCTGGAAATGGGGAGACAGAGTCAGAT
                      ____________________________________________________________
consensus             TTAAACTCAATGCCGTATTACAATCAGACAAGAGCTGGAAATGGGGAGACAGAGTCAGAT
 
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JMFS018D08+           TAGCTTTACAGATAGAG                                           
JMFS167B02+           TAGCTTTACAGATAGAG                                           
JMFS124C05+           TAGCTTTACAGATAGAGCAGAGAGTTGAAAATGGCAAAGGAAAGAGAGAACGGAACTTCA
                      ____________________________________________________________
consensus             TAGCTTTACAGATAGAGCAGAGAGTTGAAAATGGCAAAGGAAAGAGAGAACGGAACTTCA