Contig 009093:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS151A04+                                                        ATCTTTCTTCAGCAG
                      ____________________________________________________________
consensus                                                          ATCTTTCTTCAGCAG
 
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JMFS151A04+           GCCTACAGAGGTCCTGTCATCCCAAACAAGCATACAAACCCTAACACCCTCACTTGCCTT
                      ____________________________________________________________
consensus             GCCTACAGAGGTCCTGTCATCCCAAACAAGCATACAAACCCTAACACCCTCACTTGCCTT
 
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JMFS151A04+           CTTCTTAAGCAACTCCCCGAGTGTAATGTCTCCTCCTGGTTTTGGCCTCCTTGAATCCCT
                      ____________________________________________________________
consensus             CTTCTTAAGCAACTCCCCGAGTGTAATGTCTCCTCCTGGTTTTGGCCTCCTTGAATCCCT
 
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JMFS151A04+           CACTAGAGAAATTTCAGTATATACCGACCAGCCAGTAATGTAAATCATGTGCTTTGCATC
                      ____________________________________________________________
consensus             CACTAGAGAAATTTCAGTATATACCGACCAGCCAGTAATGTAAATCATGTGCTTTGCATC
 
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JMFS151A04+           AGTAATTGCATCAAAGATATCCTCCCAACATCTGTGAGGCTCATAGTACTGCCCCCCAGA
                      ____________________________________________________________
consensus             AGTAATTGCATCAAAGATATCCTCCCAACATCTGTGAGGCTCATAGTACTGCCCCCCAGA
 
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JMFS151A04+           GAGAGGGATTCTTGGTACAAACCCATCTGGGATATGTGCATCTTGATACAAAGAAACACG
                      ____________________________________________________________
consensus             GAGAGGGATTCTTGGTACAAACCCATCTGGGATATGTGCATCTTGATACAAAGAAACACG
 
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JMFS151A04+           GCATCCTTTTCTCTGTCCAAAGAAGGTGTAAGGAACACCAGGATACTTGGCACTTTTAAT
                      ____________________________________________________________
consensus             GCATCCTTTTCTCTGTCCAAAGAAGGTGTAAGGAACACCAGGATACTTGGCACTTTTAAT
 
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JMFS151A04+           TCCACGTCCCCAATTACGATCCCGGTTGACATCAAAAAACTGCAACTTTACATGGATTTT
                      ____________________________________________________________
consensus             TCCACGTCCCCAATTACGATCCCGGTTGACATCAAAAAACTGCAACTTTACATGGATTTT
 
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JMFS151A04+           GGAGCCTTCATTGATAGGATTCATGTCTTTATCAAGAATCTCAACCCACTTATCAACTTC
JMFS079E07+                       GATAGGATTCATGTCTTTATCAAGAATCTCAACCCACTTATCAACTTC
                      ____________________________________________________________
consensus             GGAGCCTTCATTGATAGGATTCATGTCTTTATCAAGAATCTCAACCCACTTATCAACTTC
 
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JMFS151A04+           TTCACCCTCCAAGAGCTCCTCTACCGGTACATAAGCTCTTCCAATTAAGGTGGCACCAAC
JMFS125F03+                                                               GCACCAAC
JMFS079E07+           TTCACCCTCCAAGAGCTCCTCTACCGGTACATAAGCTCTTCCAATTAAGGTGGCACCAAC
                      ____________________________________________________________
consensus             TTCACCCTCCAAGAGCTCCTCTACCGGTACATAAGCTCTTCCAATTAAGGTGGCACCAAC
 
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JMFS151A04+           GGGATTGTCATCCTTGACAGTGAATATGACATTTGAAGCCGAGTGGGCACAGTAA     
JMFS125F03+           GGGATTGTCATCCTTGACAGTGAATATGACATTTGAAGCCGAGTGGGCACAGTAAATATG
JMFS079E07+           GGGATTGTCATCCTTGACAGTGAATATGACATTTGAAGCCGAGTGGGCACAGTAAATATG
JMFS001B12+                                                                    ATG
                      ____________________________________________________________
consensus             GGGATTGTCATCCTTGACAGTGAATATGACATTTGAAGCCGAGTGGGCACAGTAAATATG
 
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JMFS125F03+           AAAAGACTCATTCCACTGAGGATTGTTGGGTTCTTCAACCAACTTGGTCCTGCCAACTCT
JMFS079E07+           AAAAGACTCATTCCACTGAGGATTGTTGGGTTCTTCAACCAACTTGGTCCTGCCAACTCT
JMFS001B12+           AAAAGACTCATTCCACTGAGGATTGTTGGGTTCTTCAACCAACTTGGTCCTGCCAACTCT
                      ____________________________________________________________
consensus             AAAAGACTCATTCCACTGAGGATTGTTGGGTTCTTCAACCAACTTGGTCCTGCCAACTCT
 
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JMFS125F03+           TGCCTTTTCAAGATCTATAGTAGCATATATTTCAGTTTTTCCTTTTCCAACATGAACAGC
JMFS079E07+           TGCCTTTTCAAGATCTATAGTAGCATATATTTCAGTTTTTCCTTTTCCAACATGAACAGC
JMFS001B12+           TGCCTTTTCAAGATCTATAGTAGCATATATTTCAGTTTTTCCTTTTCCAACATGAACAGC
JMFS122F10+                                                             CATGAACAGC
                      ____________________________________________________________
consensus             TGCCTTTTCAAGATCTATAGTAGCATATATTTCAGTTTTTCCTTTTCCAACATGAACAGC
 
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JMFS125F03+           CTCCTCAACATGTTCCATAATCTTGCGGAAGAACCCGCCGCCGCCACCGCCCTCACCTTG
JMFS079E07+           CTCCTCAACATGTTCCATAATCTTGCGGAAGAACCCGCCGCCGCCACCGCCCTCACCTTG
JMFS001B12+           CTCCTCAACATGTTCCATAATCTTGCGGAAGAACCCGCCGCCGCCACCGCCCTCACCTTG
JMFS122F10+           CTCCTCAACATGTTCCATAATCTTGCGGAAGAGCCCGCCGCCGCCACCGCCCTCACCTTG
                      ____________________________________________________________
consensus             CTCCTCAACATGTTCCATAATCTTGCGGAAGAACCCGCCGCCGCCACCGCCCTCACCTTG
 
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JMFS125F03+           AAGCTGATCGATCTCGTAGATCGTCGCATGGAGAGTCCCGTGAAGCAAAAACTGAGCCAT
JMFS079E07+           AAGCTGATCGATCTCGTAGATCGTCGCATGGAGAGTCCCGTGAAGCAAAAACTGAGCCAT
JMFS001B12+           AAGCTGATCGATCTCGTAGATCGTCGCATGGAGAGTCCCGTGAAGCAAAAACTGAGCCAT
JMFS122F10+           AAGCTGATCGATCTCGTAGATCGTCGCATGGAGAGTCCCGTGAAGCAAAAACTGAGCCAT
                      ____________________________________________________________
consensus             AAGCTGATCGATCTCGTAGATCGTCGCATGGAGAGTCCCGTGAAGCAAAAACTGAGCCAT
 
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JMFS125F03+           TTTTCAACCTGCAACACCAAAAACAGAAAAAAACCAAAAGGGCACCCCAATTGCTCGAGT
JMFS079E07+           TTTTCAACCTGCAACACCAAAAACAGAAAAAAACCAAAAGGGCACCCCAATTGCTCGAGT
JMFS001B12+           TTTTCAACCTGCAACACCAAAAACAGAAAAAAACCAAAAGGGCACCCCAATTGCTCGAGT
JMFS122F10+           TTTTCAACCTGCAACACCAAAAACAGAAAAAAACCAAAAGGGCACCCCAATTGCTCGAGT
                      ____________________________________________________________
consensus             TTTTCAACCTGCAACACCAAAAACAGAAAAAAACCAAAAGGGCACCCCAATTGCTCGAGT
 
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JMFS125F03+           AATTTACACACAGAAATATAACAAGTAAATCTAGAACCCTGCAGCTCAAGTTCGGGTTTA
JMFS079E07+           AATTTACACACAGAAATATAACAAGTAAATCTAGAACCCTGCAGCTCAAGTTCGGGTTTA
JMFS001B12+           AATTTACACACAGAAATATAACAAGTAAATCTAGAACCCTGCAGCTCAAGTTCGGGTTTA
JMFS122F10+           AATTTACACACAGAAATATAGCAAGTAAATCTAGAACCCTGCAGCTCAAGTTCGGGTTTA
                      ____________________________________________________________
consensus             AATTTACACACAGAAATATAACAAGTAAATCTAGAACCCTGCAGCTCAAGTTCGGGTTTA
 
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JMFS125F03+           AAGCAAGAAAAAAGAGTGTGAAAACGAGTTGGGTTTCTTTGCCGTCTAAGATGGAAAGAA
JMFS079E07+           AAGCAAGAAAAAAGAGTGTGAAAACGAGTTGGGTTTCTTTGCCGTCTAAGATGGAAAGAA
JMFS001B12+           AAGCAAGAAAAAAGAGTGTGAAAACGAGTTGGGTTTCTTTGCCGTCTAAGATGGAAAGAA
JMFS122F10+           AAGCAAGAAAAAAGAGTGTGAAAACGAGTTGGGTTTCTTTGCCGTCTAAGATGGAAAGAA
                      ____________________________________________________________
consensus             AAGCAAGAAAAAAGAGTGTGAAAACGAGTTGGGTTTCTTTGCCGTCTAAGATGGAAAGAA
 
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JMFS125F03+           TTCCAATATAT                                                 
JMFS079E07+           TTCCAATATAT                                                 
JMFS001B12+           TTCCAATATAT-AAGACGATAGTATGTAATGAGTGATGAGTGATGAATG           
JMFS122F10+           TTCCAATATATGAAGACGATAGTATGTAATGAGTGATGAGTGATGAATGATCCCCGAAAT
                      ____________________________________________________________
consensus             TTCCAATATATGAAGACGATAGTATGTAATGAGTGATGAGTGATGAATGATCCCCGAAAT
 
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JMFS122F10+           CTGCTGCCTTTTTTCTAGATTGACGTGTCCAAGTAGAGTAGACTCGGCTTACCAAGCCGA
                      ____________________________________________________________
consensus             CTGCTGCCTTTTTTCTAGATTGACGTGTCCAAGTAGAGTAGACTCGGCTTACCAAGCCGA