Contig 009088:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFF010B01+                                                CTTCTCAGCTTCTTTATGGTTAC
                      ____________________________________________________________
consensus                                                  CTTCTCAGCTTCTTTATGGTTAC
 
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JMFF010B01+           CCCAGATTTCCCAATGATATTTGCACTCTGGCTAGAAGGAACAAGAAGCTGACAATCCTC
                      ____________________________________________________________
consensus             CCCAGATTTCCCAATGATATTTGCACTCTGGCTAGAAGGAACAAGAAGCTGACAATCCTC
 
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JMFF010B01+           CCTTTCCTTCCGCCTCCTGTCAGATTCCCCAAGTGAAGCAATAGAATTAGCAATTGCTGC
                      ____________________________________________________________
consensus             CCTTTCCTTCCGCCTCCTGTCAGATTCCCCAAGTGAAGCAATAGAATTAGCAATTGCTGC
 
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JMFF010B01+           ATGCATCTTAAGAAGAGCATCCTGTGCAGCACAAAGCGGCCTATAGTTACTGAATTCCTT
                      ____________________________________________________________
consensus             ATGCATCTTAAGAAGAGCATCCTGTGCAGCACAAAGCGGCCTATAGTTACTGAATTCCTT
 
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JMFF010B01+           GTCAATCTCAACATCTTCCTTCTCTCTTACATAGCAGTAAATGAGTATAACCCTATCCTT
JMFS064E04+                                          TAGCAGTAAATGAGTATAACCCTATCCTT
                      ____________________________________________________________
consensus             GTCAATCTCAACATCTTCCTTCTCTCTTACATAGCAGTAAATGAGTATAACCCTATCCTT
 
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JMFF010B01+           AGCACCCGGAAATGGATCCACCACCTTGACCCTTGCACCGGTATCTTGTCTAATGGAATT
JMFS064E04+           AGCACCCGGAAATGGATCCACCACCTTGACCCTTGCACCGGTATCTTGTCTAATGGAATT
                      ____________________________________________________________
consensus             AGCACCCGGAAATGGATCCACCACCTTGACCCTTGCACCGGTATCTTGTCTAATGGAATT
 
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JMFF010B01+           TATGACTTTTCCACTCTTTCCAATAACACTTCCTATAACAATACCAGGGCATAAAATCCT
JMFS064E04+           TATGACTTTTCCACTCTTTCCAATAACACTTCCTATAACAATACCAGGGCATAAAATCCT
                      ____________________________________________________________
consensus             TATGACTTTTCCACTCTTTCCAATAACACTTCCTATAACAATACCAGGGCATAAAATCCT
 
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JMFF010B01+           GTAGACAACCAGCTCAGCATCACCCTTCTCATCTCTCTCTATCCTCCTTCTCTGATTCTT
JMFS064E04+           GTAGACAACCAGCTCAGCATCACCCTTCTCATCTCTCTCTATCCTCCTTCTCTGATTCTT
JMFS117D07+                                             CTCTCTATCCTCCTTCTCTGATTCTT
                      ____________________________________________________________
consensus             GTAGACAACCAGCTCAGCATCACCCTTCTCATCTCTCTCTATCCTCCTTCTCTGATTCTT
 
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JMFF010B01+           GTAGTCCCCATCATCCCTGCGGAATCGCTTCCCAGTCTCGCCCATCTAGCAGTACAGAAT
JMFS064E04+           GTAGTCCCCATCATCCCTGCGGAATCGCTTCCCAGTCTCGCCCATCTAGCAGTACAGAAT
JMFS117D07+           GTAGTCCCCATCATCCCTGCGGAATCGCTTCCCAGTCTCGCCCATCTAGCAGTACAGAAT
                      ____________________________________________________________
consensus             GTAGTCCCCATCATCCCTGCGGAATCGCTTCCCAGTCTCGCCCATCTAGCAGTACAGAAT
 
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JMFF010B01+           TGCCCAACT                                                   
JMFS064E04+           TGCCCAACTAATCACAAATAAAAAAACTCAAACATATGTCAGTCAAACAAAGAAAAAAAA
JMSF015L01+                                                                AAAAAAA
JMFS117D07+           TGCCCAACTAATCACAAATAAAAAAACTCAAACATATGTCAGTCAAACAAAG-AAAAAAA
                      ____________________________________________________________
consensus             TGCCCAACTAATCACAAATAAAAAAACTCAAACATATGTCAGTCAAACAAAGAAAAAAAA
 
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JMFS064E04+           AAAGTATTATTACAAACCCCTCAATCCTCATGACAAACAAACAAACAAAATTAAACCTTG
JMSF015L01+           AAAGTATTATTACAAACCCCTCAATCCTCATGACAAACAAACAAACAAAATTAAACCTTG
JMFS117D07+           AAAGTATTATTACAAACCCCTCAATCCTCATGACAAACAAACAAACAAAATTAAACCTTG
                      ____________________________________________________________
consensus             AAAGTATTATTACAAACCCCTCAATCCTCATGACAAACAAACAAACAAAATTAAACCTTG
 
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JMFS064E04+           AATCCTTTAATTTGTTCAATTTTAAAATGTTTAGCTCCACCATACACCGAAACCCAACAG
JMSF015L01+           AATCCTTTAATTTGTTCAATTTTAAAATGTTTAGCTCCACCATACACCGAAACCCAACAG
JMFS117D07+           AATCCTTTAATTTGTTCAATTTTAAAATGTTTAGCTCCACCATACACCGAAACCCAACAG
                      ____________________________________________________________
consensus             AATCCTTTAATTTGTTCAATTTTAAAATGTTTAGCTCCACCATACACCGAAACCCAACAG
 
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JMFS064E04+           TTTCATCAGTCCGTATTACAGTTCACTTTTCCCACTCCTTCGTTATTAAGAAACATCAAT
JMSF015L01+           TTTCATCAGTCCGTATTACAGTTCACTTTTCCCACTCCTTCGTTATTAAGAAACATCAAT
JMFS117D07+           TTTCATCAGTCCGTATTACAGTTCACTTTTCCCACTCCTTCGTTATTAAGAAACATCAAT
                      ____________________________________________________________
consensus             TTTCATCAGTCCGTATTACAGTTCACTTTTCCCACTCCTTCGTTATTAAGAAACATCAAT
 
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JMFS064E04+           CTTAGCCAAATATTCAAGGCCCTCTCAATCACAAGCAAATACAGTAGTAAAAAATAAAAG
JMSF015L01+           CTTAGCCAAATATTCAAGGCCCTCTCAATCACAAGCAAATACAGTAGTAAAAAATAAAAG
JMFS117D07+           CTTAGCCAAATATTCAAGGCCCTCTCAATCACAAGCAAATACAGTAGTAAAAAATAAAAG
                      ____________________________________________________________
consensus             CTTAGCCAAATATTCAAGGCCCTCTCAATCACAAGCAAATACAGTAGTAAAAAATAAAAG
 
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JMFS064E04+           CACGTCAATGTACACGCAGAACGGTAATATTACAGGGAGGAGAGAACTGAATC       
JMSF015L01+           CACGTCAATGTACACGCAGAACGGTAATATTACAGGGAGGAGAGAACTGAATCTACCCCA
JMFS117D07+           CACGTCAATGTACACGCAGAACGGTAATATTACAGGGAGGAGAGAACTGAATCTACCCCA
                      ____________________________________________________________
consensus             CACGTCAATGTACACGCAGAACGGTAATATTACAGGGAGGAGAGAACTGAATCTACCCCA
 
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JMSF015L01+           AAACCACAATCTTTACACACGCGAGCTGCTACT                           
JMFS117D07+           AAACCACAATCTTTACACACGCGAGCTGCTACTTGCATATATAATGAAAAACGTAGAATA
                      ____________________________________________________________
consensus             AAACCACAATCTTTACACACGCGAGCTGCTACTTGCATATATAATGAAAAACGTAGAATA
 
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JMFS117D07+           TAAGTAAGCTGACAAACGCAGAAACACTGAGAATAGCAGAAAACCCACCCCAGATGAAAC
                      ____________________________________________________________
consensus             TAAGTAAGCTGACAAACGCAGAAACACTGAGAATAGCAGAAAACCCACCCCAGATGAAAC
 
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JMFS117D07+           CTCAGCAGGAAGGCGCACAAGTTGGGGAAATTGACCGATTACAAACACTTCAAAATCAAA
                      ____________________________________________________________
consensus             CTCAGCAGGAAGGCGCACAAGTTGGGGAAATTGACCGATTACAAACACTTCAAAATCAAA