Contig 009084:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS119C12+                          AGCATACTGACTTGACTGACAGTATGCCTTGTTGTTTGGGACTGG
                      ____________________________________________________________
consensus                            AGCATACTGACTTGACTGACAGTATGCCTTGTTGTTTGGGACTGG
 
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JMFS119C12+           CATAGCAAATTGTTCAGATCCAGTTTGCTGTCCAGGTAACCTTTGTGATACTATGCCAGA
                      ____________________________________________________________
consensus             CATAGCAAATTGTTCAGATCCAGTTTGCTGTCCAGGTAACCTTTGTGATACTATGCCAGA
 
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JMFS119C12+           ACCACGTGAATCAGCCTCAGAAAGAACATCTTGAATCAGCTGGTCAGCCTCGAGCTATCT
JMFS112G04+                                                                GCTATCT
                      ____________________________________________________________
consensus             ACCACGTGAATCAGCCTCAGAAAGAACATCTTGAATCAGCTGGTCAGCCTCGAGCTATCT
 
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JMFS119C12+           GCTCTGGAGTGCCCATTAGTTCAACCCCTCTAGTTTGAGAATTAGGGTCAGCATCCATGT
JMFS064D07+                                             TTGAGAATTCGGGTCAGCATCCATGT
JMFS112G04+           GCTCTGGAGTGCCCATAAGTTCAACCCCTCTAGTTTGAGAATTCGGGTCAGCATCCATGT
                      ____________________________________________________________
consensus             GCTCTGGAGTGCCCATTAGTTCAACCCCTCTAGTTTGAGAATTCGGGTCAGCATCCATGT
 
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JMFS119C12+           CTCTGGTACCCCGCATCAGTGCTCCAGATTGGAGTTGAAGACACAGAGATGTTTCCCCAC
JMFS064D07+           CTCTGGTAACTTGTATCTGTGCTCCAGATTGGAGTTGAAGATACCTAATGGTTTCCCCAC
JMFS112G04+           CTCTGGTAACTTGTATCTTTGCTCCAGATTGGAGTTGAAGATACCTAATGGTTTCCCCAC
                      ____________________________________________________________
consensus             CTCTGGTAACTTGTATCTGTGCTCCAGATTGGAGTTGAAGATACCTAATGGTTTCCCCAC
 
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JMFS119C12+           CTTTGCCTATGATTACACCAACGCATGCCATTTGGACACCTCAATCTTCTTGCTTGGTGC
JMFS064D07+           CCTTGCCTATGATTACACCTACTC-TGCCATTTGGA-ATCTCTATTTTCTTGCTTGGCCC
JMFS112G04+           CCTTGCCTATGATTACACCTACTC-TGCCATTTGGA-ATCTCTATTTTCTTGCTTGGACC
                      ____________________________________________________________
consensus             CCTTGCCTATGATTACACCTACTC-TGCCATTTGGA-ATCTCTATTTTCTTGCTTGGTCC
 
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JMFS119C12+           AGGGTAACCATATGA                                             
JMFS064D07+           AGGGTAACCATATGAATTACTTGCTGGAGGAAGAAAAGTAGATCCCATTGGCTTCTGGGC
JMFS112G04+           AGGGTAACCATATGAATTACTTGCTGGAGGAAGAAAAGTAGATCCCATTGGCTTCTGGG-
                      ____________________________________________________________
consensus             AGGGTAACCATATGAATTACTTGCTGGAGGAAGAAAAGTAGATCCCATTGGCTTCTGGGC
 
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JMFS064D07+           TTACGTTCTCTTGATTCAAATGCAGCAGCGCCACCACCGTTGTCAACCCTGGGCTTCTTT
JMFS112G04+           ----GTTCTCTTGATTCAAATGCAGCAGCGCCACCACCGTTGTCAACCCTGGGCTTCTTT
                      ____________________________________________________________
consensus             TTACGTTCTCTTGATTCAAATGCAGCAGCGCCACCACCGTTGTCAACCCTGGGCTTCTTT
 
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JMFS064D07+           GGATCCGAGTTGTTGATTAGCCGAGCAGCGATCTCCTGAGCCCTCTGCTTCGCGAGCTGG
JMFS112G04+           GGATCCGAGTTGTTGATTAGCCGAGCAGCGATCTCCTGAGCCCTCTGCTTCGCGAGCTGG
                      ____________________________________________________________
consensus             GGATCCGAGTTGTTGATTAGCCGAGCAGCGATCTCCTGAGCCCTCTGCTTCGCGAGCTGG
 
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JMFS064D07+           AAGTCGTCCATCGGAGGCGGAACATTATTGTAAGAAGGAGGAGGAGCGCCAGCGCCAGCG
JMFS112G04+           AAGTCGTCCATCGGAGGCGGAACATTATTGTAAGAAGGAGGAGGAGCGCCAGCGCCAGCG
                      ____________________________________________________________
consensus             AAGTCGTCCATCGGAGGCGGAACATTATTGTAAGAAGGAGGAGGAGCGCCAGCGCCAGCG
 
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JMFS064D07+           GCGGAACCGTCGGGTGGAGACAGTGAAGAGATTGGGGCAGAGAATCCGGTGGGCCTGCGC
JMFS112G04+           GCGGAACCGTCGGGTGGAGACAGTGAAGAGATTGGGGCAGAGAATCCGGTGGGCCTGCGC
                      ____________________________________________________________
consensus             GCGGAACCGTCGGGTGGAGACAGTGAAGAGATTGGGGCAGAGAATCCGGTGGGCCTGCGC
 
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JMFS064D07+           GACACCGGAGAAGGGGAGGTTGGCTCCTCGTACTTCCTCTTGTTGGACCCCGCTTCCGAT
JMFS112G04+           GACACCGGAGAAGGGGAGGTTGGCTCCTCGTACTTCCTCTTGTTGGACCCCGCTTCCGAT
                      ____________________________________________________________
consensus             GACACCGGAGAAGGGGAGGTTGGCTCCTCGTACTTCCTCTTGTTGGACCCCGCTTCCGAT
 
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JMFS064D07+           GCGTACTGTGCCTCTTCAGCCATTTTTG                                
JMFS112G04+           GCGTACTGTGCCTCTTCAGCCATTTTTGGTCGGAAAGAGAGTGGAAACCCTAGATTAGAT
                      ____________________________________________________________
consensus             GCGTACTGTGCCTCTTCAGCCATTTTTGGTCGGAAAGAGAGTGGAAACCCTAGATTAGAT