Contig 009081:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS110C03Sequence617009081 (4)ref|XP_009600764.1|1e-19PREDICTED: probable serine/threonine-protein kinase At1g18390 [Nicotiana toment
JMSF008D04Sequence310009081 (4)ref|XP_009613901.1|2e-08PREDICTED: probable serine/threonine-protein kinase At1g18390 [Nicotiana toment771004191 (3)ref|XP_006344307.1|2e-112PREDICTED: probable receptor-like protein kinase At5g39020-like [Solanum tubero
JMSF019H14Sequence566009081 (4)ref|XP_009600764.1|4e-25PREDICTED: probable serine/threonine-protein kinase At1g18390 [Nicotiana toment823004191 (3)ref|XP_006344307.1|2e-140PREDICTED: probable receptor-like protein kinase At5g39020-like [Solanum tubero
JMSF031D08Sequence644009081 (4)ref|XP_009600764.1|3e-24PREDICTED: probable serine/threonine-protein kinase At1g18390 [Nicotiana toment744004191 (3)ref|XP_006344307.1|2e-123PREDICTED: probable receptor-like protein kinase At5g39020-like [Solanum tubero

Alignment

This contig is upended


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JMSF019H14+              CCTTATGAAAATTAAAGAACCTAATTTCCCAAATAAGTCACTGGCATTGGATGTTCT
JMSF031D08+                  ATGAAAATTAAAGAACCTAATTTCCCAAATAAGTCACTGGCATTGGATGTTCT
                      ____________________________________________________________
consensus                CCTTATGAAAATTAAAGAACCTAATTTCCCAAATAAGTCACTGGCATTGGATGTTCT
 
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JMSF019H14+           GTTAAACGGCAATTGAACAACCGAACACTCCGCTGGAAGACCCCGACCGCCACCCGGTAG
JMSF031D08+           GTTAAACGGCAATTGAACAACCGAACACTCCGCTGGAAGACCCCGACCGCCACCCGGTAG
JMFS110C03+                                                      CGACCGCCACCCGGTAG
                      ____________________________________________________________
consensus             GTTAAACGGCAATTGAACAACCGAACACTCCGCTGGAAGACCCCGACCGCCACCCGGTAG
 
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JMSF019H14+           AGTACGATTCTCCTCCTCGGTATAGTACAAGGTGAAGCCTTCGCAGCTGTTATAGCTTTT
JMSF031D08+           AGTACGATTCTCCTCCTCGGTATAGTACAAGGTGAAGCCTTCGCAGCTGTTATAGCTTTT
JMFS110C03+           AGTACGATTCTCCTCCTCGGTATAGTACAAGGTGAAGCCTTCGCAGCTGTTATAGCTTTT
                      ____________________________________________________________
consensus             AGTACGATTCTCCTCCTCGGTATAGTACAAGGTGAAGCCTTCGCAGCTGTTATAGCTTTT
 
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JMSF019H14+           GTATCCTCGGAAATAATCATCAATCTCGTGAAACCCAACAACGTTCGAAGTACGATTGCA
JMSF031D08+           GTATCCTCGGAAATAATCATCAATCTCGTGAAACCCAACAACGTTCGAAGTACGATTGCA
JMFS110C03+           GTATCCTCGGAAATAATCATCAATCTCGTGAAACCCAACAACGTTCGAAGTACGATTGCA
                      ____________________________________________________________
consensus             GTATCCTCGGAAATAATCATCAATCTCGTGAAACCCAACAACGTTCGAAGTACGATTGCA
 
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JMSF019H14+           CTTGTAAAACATCATAGTTAGCCCGAATTCGAAGGAAATGGAAGGAGAGCTGGGAATAGA
JMSF031D08+           CTTGTAAAACATCATAGTTAGCCCGAATTCGAAGGAAATGGAAGGAGAGCTGGGAATAGA
JMFS110C03+           CTTGTAAAACATCATAGTTAGCCCGAATTCGAAGGAAATGGAAGGAGAGCTGGGAATAGA
                      ____________________________________________________________
consensus             CTTGTAAAACATCATAGTTAGCCCGAATTCGAAGGAAATGGAAGGAGAGCTGGGAATAGA
 
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JMSF019H14+           GATTCCTCTGTGGAAAACGTTGCAACTTCGTGTTCGCAGGTATTTGTCAAGAACTGGGTC
JMSF031D08+           GATTCCTCTGTGGAAAACGTTGCAACTTCGTGTTCGCAGGTATTTGTCAAGAACTGGGTC
JMFS110C03+           GATTCCTCTGTGGAAAACGTTGCAACTTCGTGTTCGCAGGTATTTGTCAAGAACTGGGTC
                      ____________________________________________________________
consensus             GATTCCTCTGTGGAAAACGTTGCAACTTCGTGTTCGCAGGTATTTGTCAAGAACTGGGTC
 
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JMSF019H14+           GAAGAGCAGCATAATTTCATCCACAATAATTGGAAGTCCATATTGTTGTTGGCCCAACGC
JMSF031D08+           GAAGAGCAGCATAATTTCATCCACAATAATTGGAAGTCCATATTGTTGTTGGCCCAACGC
JMSF008D04+                                          GGAAGTCCATATTGTTGTTGGCCCAACGC
JMFS110C03+           GAAGAGCAGCATAATTTCATCCACAATAATTGGAAGTCCATATTGTTGTTGGCCCAACGC
                      ____________________________________________________________
consensus             GAAGAGCAGCATAATTTCATCCACAATAATTGGAAGTCCATATTGTTGTTGGCCCAACGC
 
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JMSF019H14+           GATTGTTGGGTATGGAGTGGCACCACAAGCTAAGGTGTACAGCCCGCACTCTGGTCGGGA
JMSF031D08+           GATTGTTGGGTATGGAGTGGCACCACAAGCTAAGGTGTACAGCCCGCACTCTGGTCGGGA
JMSF008D04+           GATTGTTGGGTATGGAGTGGCACCACAAGCTAAGGTGTACAGCCCGCACTCTGGTCGGGA
JMFS110C03+           GATTGTTGGGTATGGAGTGGCACCACAAGCTAAGGTGTACAGCCCGCACTCTGGTCGGGA
                      ____________________________________________________________
consensus             GATTGTTGGGTATGGAGTGGCACCACAAGCTAAGGTGTACAGCCCGCACTCTGGTCGGGA
 
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JMSF019H14+           AACATTACTGGAGAAAGGAAAACTGAGGTTTCGCAGGTTTCCACAGGAGAATAGTTTGGG
JMSF031D08+           AACATTACTGGAGAAAGGAAAACTGAGGTTTCGCAGGTTTCCACAGGAGAATAGTTTGGG
JMSF008D04+           AACATTACTGGAGAAAGGAAAACTGAGGTTTCGCAGGTTTCCACAGGAGAATAGTTTGGG
JMFS110C03+           AACATTACTGGAGAAAGGAAAACTGAGGTTTCGCAGGTTTCCACAGGAGAATAGTTTGGG
                      ____________________________________________________________
consensus             AACATTACTGGAGAAAGGAAAACTGAGGTTTCGCAGGTTTCCACAGGAGAATAGTTTGGG
 
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JMSF019H14+           GCAGATAGATTGGGGTTTGCTTTCAACT                                
JMSF031D08+           GCAGATAGATTGGGGTTTGCTTTCAACTAAGTGAAGAAGAAACAAAAGGAAGCAAACGAA
JMSF008D04+           GCAGATAGATTGGGGTTTGCTTTCAACTAAGTGAAGAAGAAACAAAAGGAAGCAAACGAA
JMFS110C03+           GCAGATAGATTGGGGTTTGCTTTCAACTAAGTGAAGAAGAAACAAAAGGAAGCAAACGAA
                      ____________________________________________________________
consensus             GCAGATAGATTGGGGTTTGCTTTCAACTAAGTGAAGAAGAAACAAAAGGAAGCAAACGAA
 
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JMSF031D08+           ACGTGGATATGTGGGCATACTCAACTCTGGCATAGCAAAACATATACA            
JMSF008D04+           ACGTGGATATGTGGGCATACTCAACTCTGGCATAGCAAAACATATACATACAATAATGGA
JMFS110C03+           ACGTGGATATGTGGGCATACTCAACTCTGGCATAGCAAAACATATACATACAATAATGGA
                      ____________________________________________________________
consensus             ACGTGGATATGTGGGCATACTCAACTCTGGCATAGCAAAACATATACATACAATAATGGA
 
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JMSF008D04+           GTGGAAGAAGAAATAATTAAACTTGAAAAGTTGGCACTC                     
JMFS110C03+           GTGGAAGAAGAAATAATTAAACTTGAAAAGTTGGCACTCAAAATCTGATCTTCATTCTAG
                      ____________________________________________________________
consensus             GTGGAAGAAGAAATAATTAAACTTGAAAAGTTGGCACTCAAAATCTGATCTTCATTCTAG