Contig 009073:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS103H09Sequence538009073 (2)ref|XP_009606485.1|7e-06PREDICTED: uncharacterized protein LOC104100846 isoform X2 [Nicotiana tomentosi
JMSF001O19Sequence193000546 (2)718009073 (2)ref|XP_006339177.1|103PREDICTED: uncharacterized protein LOC102588943 [Solanum tuberosum]

Alignment

This contig is upended


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rJMSF001O19+                             ATGATATNCAAACAAACGATNCAGATGAAAATGGAATCCAG
                      ____________________________________________________________
consensus                                ATGATATNCAAACAAACGATNCAGATGAAAATGGAATCCAG
 
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rJMSF001O19+          GAGGAGGAGGTTCGCGATTGTGTGACTGGGAACAGAAACATTTGTGGCGAGATTGAGGAA
                      ____________________________________________________________
consensus             GAGGAGGAGGTTCGCGATTGTGTGACTGGGAACAGAAACATTTGTGGCGAGATTGAGGAA
 
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rJMSF001O19+          GTTGACGAGGAAGACGGTGGAAAGGCGGGGACTGTTGATGAGGATACTCAGAACCAAGAT
                      ____________________________________________________________
consensus             GTTGACGAGGAAGACGGTGGAAAGGCGGGGACTGTTGATGAGGATACTCAGAACCAAGAT
 
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rJMSF001O19+          TCCCCGAGGAATCAAATCCTACAGGGAGGCTCCACCACTCGAAACAAGAAGATAGCCATT
                      ____________________________________________________________
consensus             TCCCCGAGGAATCAAATCCTACAGGGAGGCTCCACCACTCGAAACAAGAAGATAGCCATT
 
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rJMSF001O19+          AGCCCCGAGGTTCAGCAAGCTCTGGCAACACTGGAAAAGGCTATTTCTTTCATCCGCGAG
                      ____________________________________________________________
consensus             AGCCCCGAGGTTCAGCAAGCTCTGGCAACACTGGAAAAGGCTATTTCTTTCATCCGCGAG
 
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rJMSF001O19+          AATAGATGCAACTCAAATTTCAAATCTATGTGCAGAAGCAACATAGAAGATTCAAAATTC
                      ____________________________________________________________
consensus             AATAGATGCAACTCAAATTTCAAATCTATGTGCAGAAGCAACATAGAAGATTCAAAATTC
 
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rJMSF001O19+          TCAGGATTTAACCAAATTTACATGAATGGCACCGGGACTACTACTGAAATATCGAGAAAG
                      ____________________________________________________________
consensus             TCAGGATTTAACCAAATTTACATGAATGGCACCGGGACTACTACTGAAATATCGAGAAAG
 
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rJMSF001O19+          GAATCAGTAGAGATTACCTCATACGAGCATAGGATTAGCTCCTGCAGTCATAGTTCCAGG
JMFS103H09-                                                                TTCCAGG
                      ____________________________________________________________
consensus             GAATCAGTAGAGATTACCTCATACGAGCATAGGATTAGCTCCTGCAGTCATAGTTCCAGG
 
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rJMSF001O19+          CGTACGAGTTCTAGTTTGTGCACAAAGGAAACGAGCCATAATAAGATAGCACCGGTGTCA
JMFS103H09-           CGTACGAGTTCTAGTTTGTGCACAAAGGAAACGAGCCATAATAAGATAGCACCGGTGTCA
                      ____________________________________________________________
consensus             CGTACGAGTTCTAGTTTGTGCACAAAGGAAACGAGCCATAATAAGATAGCACCGGTGTCA
 
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rJMSF001O19+          CCAGATGCTTATGTTGCCGACCCTAATTCACATTCCTGTGGAGACCACGAAGCCGGAGAG
JMFS103H09-           CCAGATGCTTATGTTGCCGACCCTAATTCACATTCCTGTGGAGACCACGAAGCCGGAGAG
                      ____________________________________________________________
consensus             CCAGATGCTTATGTTGCCGACCCTAATTCACATTCCTGTGGAGACCACGAAGCCGGAGAG
 
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rJMSF001O19+          ACGATTTTGGAGAATATAGAAAAGGACAATAATCTGACAGCTTCTCATGTAAATCATATC
JMFS103H09-           ACGATTTTGGAGAATATAGAAAAGGACAATAATCTGACAGCTTCTCATGTAAATCATATC
                      ____________________________________________________________
consensus             ACGATTTTGGAGAATATAGAAAAGGACAATAATCTGACAGCTTCTCATGTAAATCATATC
 
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rJMSF001O19+          AAAGAAGATAGAACTGGTAAAAGAAAAACCAGAAAGCTTTCATACCTGTTGCTATAGTTT
JMFS103H09-           AAAGAAGATAGAACTGGTAAAAGAAAAACCAGAAAGCTTTCATA-CTGTTGCTATAGTTT
                      ____________________________________________________________
consensus             AAAGAAGATAGAACTGGTAAAAGAAAAACCAGAAAGCTTTCATACCTGTTGCTATAGTTT
 
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rJMSF001O19+          ACTTTCTAGGCAGATT                                            
JMFS103H09-           ACTTTCTAGGCAGATTTCGACTTAAGAATTAACGAATAACATTGACAATATTGAAACATC
                      ____________________________________________________________
consensus             ACTTTCTAGGCAGATTTCGACTTAAGAATTAACGAATAACATTGACAATATTGAAACATC