| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF018M23 | Sequence | 551 | 011914 (20) | ref|XP_009597624.1| | 237 | PREDICTED: uncharacterized protein LOC104093569 [Nicotiana tomentosiformis] | 792 | 009067 (5) | ref|XP_004232832.1| | 85.5 | PREDICTED: uncharacterized protein LOC101263075 [Solanum lycopersicum] |
| JMFS095C09 | Sequence | 624 | 009067 (5) | ||||||||
| JMFS117H12 | Sequence | 575 | 009067 (5) | ref|XP_011096264.1| | 57.0 | PREDICTED: uncharacterized protein LOC105175509 [Sesamum indicum] | |||||
| JMSF008E08 | Sequence | 363 | 011914 (20) | ref|XP_009597624.1| | 92.0 | PREDICTED: uncharacterized protein LOC104093569 [Nicotiana tomentosiformis] | 763 | 009067 (5) | ref|XP_009597624.1| | 78.2 | PREDICTED: uncharacterized protein LOC104093569 [Nicotiana tomentosiformis] |
| JMSF008I07 | Sequence | 302 | 011914 (20) | ref|XP_009597624.1| | 53.9 | PREDICTED: uncharacterized protein LOC104093569 [Nicotiana tomentosiformis] | 771 | 009067 (5) | ref|XP_004232832.1| | 87.0 | PREDICTED: uncharacterized protein LOC101263075 [Solanum lycopersicum] |
This contig is upended
. : . : . : . : . : . :
rJMSF008I07+ CTACTGAAGAAAGTTCTCCCGTTAAGGGTGTCAAGAAAAGTAATA
rJMFF018M23+ CCCGTTAAGGGTGTCAAGAAAAGTAATA
____________________________________________________________
consensus CTACTGAAGAAAGTTCTCCCGTTAAGGGTGTCAAGAAAAGTAATA
. : . : . : . : . : . :
rJMSF008I07+ AGAAGGGTATGAGTCCTTCAACAAAGACGCCAGCAAAGGATACAAAGTCTAAGTTATCTC
rJMFF018M23+ AGAAGGATATGAGTCCTTCAACAAAGACGCCAGCAAAGGATACAAAGTCTAAGTTATCTC
rJMSF008E08+ TATGAGTCCTTCAACAAAGACGCCAGCAAAGGATACAAAGTCTAAGTTATCTC
____________________________________________________________
consensus AGAAGGGTATGAGTCCTTCAACAAAGACGCCAGCAAAGGATACAAAGTCTAAGTTATCTC
. : . : . : . : . : . :
rJMSF008I07+ CAGGATACCTCTCAAGAAGTAGGATTGACGCTTTATCAAAAAGCAAGAAGATGTCTCCGA
rJMFF018M23+ CAGGATACCTCTCAAGAAGTAGGATTGACGCTTTATCAAAAAGCAAGAAGATGTCTCCGA
rJMSF008E08+ CAGGATACCTCTCAAGAAGTAGGATNGACGCTTTATCAAAAAGCAAGAAGATGTCTCCGA
____________________________________________________________
consensus CAGGATACCTCTCAAGAAGTAGGATTGACGCTTTATCAAAAAGCAAGAAGATGTCTCCGA
. : . : . : . : . : . :
rJMSF008I07+ CAAATAAGCTGGGAGTCCAAAAGAGCAAATTAGAAAGGGAGGAAGAAGCTCGTAAAAGGA
rJMFF018M23+ CAAATAAGCTGGGAGTCCAAAAGAGCAAATTAGAAAGGGAGGAAGAAGCTCGTAAAAGGA
rJMSF008E08+ CAAATAAGCTGGGAGTCCAAAAGAGCAAATTAGAAAGGGAGGAAGAAGCTCGTAAAAGGA
____________________________________________________________
consensus CAAATAAGCTGGGAGTCCAAAAGAGCAAATTAGAAAGGGAGGAAGAAGCTCGTAAAAGGA
. : . : . : . : . : . :
rJMSF008I07+ TGGAAGAGCTGGCGCTTGAAAGGCAGAAAAGAATTGCCGAAAGGACTGCTGCCAGTGGTC
rJMFF018M23+ TGGAAGAGCTGGCGCTTGAAAGGCAGAAAAGAATTGCCGAAAGGACTGCTGCCAGTGGTC
rJMSF008E08+ TGGAAGAGCTGGCGCTTGAAAGGCAGAAAAGAATTGCCGAAAGGACTGCTGCCAGTGGTC
JMFS117H12- GCTTGAAAGGCAGAAAAGAATTGCCGAAAGGACTGCTGCCAGTGGTC
JMFS095C09+ CCGAAAGGACTGCTGCCAGTGGTC
____________________________________________________________
consensus TGGAAGAGCTGGCGCTTGAAAGGCAGAAAAGAATTGCCGAAAGGACTGCTGCCAGTGGTC
. : . : . : . : . : . :
rJMSF008I07+ TTACCCCATCGCCATCCAAAAAAGTCCTAGCCGGCAGTAAAACAGCTTCTCCGAAGCTGG
rJMFF018M23+ TTACCCCATCGCCATCCAAAAAAGTCCTAGCCGGCAGTAAAACAGCTTCTCCGAAGCTGG
rJMSF008E08+ TTACCCCATCGCCATCCAAAAAAGTCCTAGCCGGCAGTAAAACAGCTTCTCCGAAGCTGG
JMFS117H12- TTACCCCATCGCCATCCAAAAAAGTCCTAGCCGGCAGTAAAACAGCTTCTCCGAAGCTGG
JMFS095C09+ TTACCCCATCGCCATCCAAAAAAGTCCTAGCCGGCAGTAAAACAGCTTCTCCGAAGCTGG
____________________________________________________________
consensus TTACCCCATCGCCATCCAAAAAAGTCCTAGCCGGCAGTAAAACAGCTTCTCCGAAGCTGG
. : . : . : . : . : . :
rJMSF008I07+ AAAAGCACAGGGTTCAACCTAGTAACTCCCGCGTCAAAGCATCCTAGACCTCCTACTGAG
rJMFF018M23+ AAAAGCACAGGGTTCAACCTAGTAACTCCCGCGTCAAAGCATCCTAGACCTCCTACTGAG
rJMSF008E08+ AAAAGCACAGGGTTCAACCTAGTAACTCCCGCGTCAAAGCATCCTAGACCTCCTACTGAG
JMFS117H12- AAAAGCACAGGGTTCAACCTAGTAACTCCCGCGTCAAAGCATCCTAGACCTCCTACTGAG
JMFS095C09+ AAAAGCACAGGGTTCAACCTAGTAACTCCCGCGTCAAAGCATCCTAGACCTCCTACTGAG
____________________________________________________________
consensus AAAAGCACAGGGTTCAACCTAGTAACTCCCGCGTCAAAGCATCCTAGACCTCCTACTGAG
. : . : . : . : . : . :
rJMSF008I07+ AATGTAAAGATCGAAACTTCCTGAGATTTGGCTAAACATGGACACGAAACACTTCTCCTA
rJMFF018M23+ AATGTAAAGATCGAAACTTCCTGAGATTTGGCTAAACATGGACACGAAACACTTCTCCTA
rJMSF008E08+ AATGTAAAGATCGAAACTTCCTGAGATTTGGCTAAACATGGACACGAAACACTTCTCCTA
JMFS117H12- AATGTAAAGATCGAAACTTCCTGAGATTTGGCTAAACATGGACACGAAACACTTCTCCTA
JMFS095C09+ AATGTAAAGATCGAAACTTCCTGAGATTTGGCTAAACATGGACACGAAACACTTCTCCTA
____________________________________________________________
consensus AATGTAAAGATCGAAACTTCCTGAGATTTGGCTAAACATGGACACGAAACACTTCTCCTA
. : . : . : . : . : . :
rJMSF008I07+ TGATCCTAAATCCCAGAAATTCTTCCTCTTCATTGAATGCCCATCAACGTGTGCTTGTTC
rJMFF018M23+ TGATCCTAAATCCCAGAAATTCTTCCTCTTCATTGAATGCCCATCAACGTGTGCTTGTTC
rJMSF008E08+ TGATCCTAAATCCCAGAAATTCTTCCTCTTCATTGAATGCCCATCAACGTGTGCTTGTTC
JMFS117H12- TGATCCTAAATCCCAGAAATTCTTCCTCTTCATTGAATGCCCATCAACGTGTGCTTGTTC
JMFS095C09+ TGATCCTAAATCCCAGAAATTCTTCCTCTTCATTGAATGCCCATCAACGTGTGCTTGTTC
____________________________________________________________
consensus TGATCCTAAATCCCAGAAATTCTTCCTCTTCATTGAATGCCCATCAACGTGTGCTTGTTC
. : . : . : . : . : . :
rJMSF008I07+ CTGCAAAAACATTCTCACCAAGTCCCGTCATTGTAAGTTGTTTCCAGTCCTCTTTTTTGT
rJMFF018M23+ CTGCAAAAACATTCTCACCAAGTCCCGTCATTGTAAGTTGTTTCCAGTCCTCTTTTTTGT
rJMSF008E08+ CTGCAAAAACATTCTCACCAAGTCCCGTCATTGTAAGTTGTTTCCAGTCCTCTTTTTTGT
JMFS117H12- CTGCAAAAACATTCTCACCAAGTCCCGTCATTGTAAGTTGTTTCCAGTCCTCTTTTTTGT
JMFS095C09+ CTGCAAAAACATTCTCACCAAGTCCCGTCATTGTAAGTTGTTTCCAGTCCTCTTTTTTGT
____________________________________________________________
consensus CTGCAAAAACATTCTCACCAAGTCCCGTCATTGTAAGTTGTTTCCAGTCCTCTTTTTTGT
. : . : . : . : . : . :
rJMSF008I07+ TGGTTGAGCCAAGATTTGCACTGCCAGTTTACCCATTCTTACAATGTAAATCTATGAATG
rJMFF018M23+ TGGTTGAGCCAAGATTTGCACTGCCAGTTTACCCATTCTTACAATGTAAATCTATGAATG
rJMSF008E08+ TGGTTGAGCCAAGATTTGCACTGCCAGTTTACCCATTCTTACAATGTAAATCTATGAATG
JMFS117H12- TGGTTGAGCCAAGATTTGCACTGCCAGTTTACCCATTCTTACAATGTAAATCTATGAATG
JMFS095C09+ TGGTTGAGCCAAGATTTGCACTGCCAGTTTACCCATTCTTACAATGTAAATCTATGAATG
____________________________________________________________
consensus TGGTTGAGCCAAGATTTGCACTGCCAGTTTACCCATTCTTACAATGTAAATCTATGAATG
. : . : . : . : . : . :
rJMSF008I07+ TAAAGTTGTTGGTCCAATAATACATGTAATGATTATTCTTGTTTCCATATCTAGAAGGAT
rJMFF018M23+ TAAAGTTGTTGGTCCAATAATACATGTAATGATTATTCTTGTTTCCATATCTAGAAGGAT
rJMSF008E08+ TAAAGTTGTTGGTCCAATAATACATGTAATGATTATTCTTGTTTCCATATCTAGAAGGAT
JMFS117H12- TAAAGTTGTTGGTCCAATAATACATGTAATGATTATTCTTGTTTCCATATCTAGAAGGAT
JMFS095C09+ TAAAGTTGTTGGTCCAATAATACATGTAATGATTATTCTTGTTTCCATATCTAGAAGGAT
____________________________________________________________
consensus TAAAGTTGTTGGTCCAATAATACATGTAATGATTATTCTTGTTTCCATATCTAGAAGGAT
. : . : . : . : . : . :
rJMSF008I07+ ATGATAAGCTTTGGATATTACCAGGCAATTTATTTGTGTTATTGCAGGCTTCCTTAGCAG
rJMFF018M23+ ATGATAAGCTTTGGATATTACCAGGCAATTTATTTGTGTTATTGCAGGCTTCCTTAGCAG
rJMSF008E08+ ATGATAAGCTTTGGATATTACCAGGCAATTTATTTGTGTTATTGCAGGCTTCCTTAGCAG
JMFS117H12- ATGATAAGCTTTGGATATTACCAGGCAATTTATTTGTGTTATTGCAGGCTTCCTTAGCAG
JMFS095C09+ ATGATAAGCTTTGGATATTACCAGGCAATTTATTTGTGTTATTGCAGGCTTCCTTAGCAG
____________________________________________________________
consensus ATGATAAGCTTTGGATATTACCAGGCAATTTATTTGTGTTATTGCAGGCTTCCTTAGCAG
. : . : . : . : . : . :
rJMSF008I07+ CCTGAT
rJMFF018M23+ CCTGATTGTTATTTATTTATTTATAATAAA
rJMSF008E08+ CCTGATTGTTATTTATTTATTTATAATAAAATGTGTGAAACATTTTG
JMFS117H12- CCTGATTGTTATTTATTTATTTATAATAAAATGTGTGAAACATTTTG
JMFS095C09+ CCTGATTGTTATTTATTTATTTATAATAAAATGTGTGAAACATTTTGTATATTTGTTAGA
____________________________________________________________
consensus CCTGATTGTTATTTATTTATTTATAATAAAATGTGTGAAACATTTTGTATATTTGTTAGA
. : . : . : . : . : . :
JMFS095C09+ CTTAAAGAAATATGAATTGTTTTTTGCTAAAAAAAAAAAAAAAAAAACTCGAACTAGTTC
____________________________________________________________
consensus CTTAAAGAAATATGAATTGTTTTTTGCTAAAAAAAAAAAAAAAAAAACTCGAACTAGTTC