Contig 009065:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF009B24Sequence529009065 (8)779004689 (5)gb|AFY06670.1|306homeobox-leucine zipper protein ATHB-15-like protein [Nicotiana tabacum]
JMFF019I16Sequence528009065 (8)766004689 (5)gb|AFY06670.1|363homeobox-leucine zipper protein ATHB-15-like protein [Nicotiana tabacum]
JMFS040D11Sequence614009065 (8)
JMFS052H03Sequence597009065 (8)
JMFS094D09Sequence630009065 (8)
JMFS098A07Sequence642009065 (8)ref|XP_010098130.1|7e-41Homeobox-leucine zipper protein ATHB-15 [Morus notabilis] gb|EXB74567.1| Homeobo
JMFS163C06Sequence585009065 (8)
JMSF046M19Sequence705009065 (8)760004689 (5)ref|XP_002515977.1|1e-104DNA binding protein, putative [Ricinus communis] gb|EEF46397.1| DNA binding prot

Alignment

This contig is upended


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JMFS098A07+                                                TGAAGCCTTGAGGCTTCTTTCCT
                      ____________________________________________________________
consensus                                                  TGAAGCCTTGAGGCTTCTTTCCT
 
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JMFS098A07+           CTGTTTCTCCCTGCATCTTCGATTTTGAAACCAAACTTTGATTTGCTTAGGCTCAATATT
                      ____________________________________________________________
consensus             CTGTTTCTCCCTGCATCTTCGATTTTGAAACCAAACTTTGATTTGCTTAGGCTCAATATT
 
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JMFS098A07+           GCAGAGAATAGGGCATTCACGAATCAGCTGCTGACGACGCATAGAACTGGGTTTGGGGCA
                      ____________________________________________________________
consensus             GCAGAGAATAGGGCATTCACGAATCAGCTGCTGACGACGCATAGAACTGGGTTTGGGGCA
 
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JMFS098A07+           CTCATGATAAACCCTCTCAAGGGCTTCAACCTGCTCAGGTGTGTAGCGGACATATTTGCC
JMFS163C06+                                                           GACATATTTGCC
JMSF046M19+                                          TGCTCAGGTGTGTAGCGGACATATTTGCC
                      ____________________________________________________________
consensus             CTCATGATAAACCCTCTCAAGGGCTTCAACCTGCTCAGGTGTGTAGCGGACATATTTGCC
 
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JMFS098A07+           GTCCACGGCTGACTTACCATCCTTGCAGGAAATTGACATCTTGTTTCCTCAAAACCTCAA
JMFS163C06+           GTCCACGGCTGACTTACCATCCTTGCAGGAAATTGACATCTTGTTTCCTCAAAACCTCAA
JMSF046M19+           GTCCACGGCTGACTTACCATCCTTGCAGGAAATTGACATCTTGTTTCCTCAAAACCTCAA
                      ____________________________________________________________
consensus             GTCCACGGCTGACTTACCATCCTTGCAGGAAATTGACATCTTGTTTCCTCAAAACCTCAA
 
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JMFS098A07+           AAGCCCCGTTCTTTACAGAGAAATCAAAACTTCCAGTAAAGTTCACTTATTCAGAAAGAA
JMFS163C06+           AAGCCCCGTTCTTTACAGAGAAATCAAAACTTCCAGTAAAGTTCACTTATTCAGAAAGAA
JMSF046M19+           AAGCCCCGTTCTTTACAGAGAAATCAAAACTTCCAGTAAAGTTCACTTATTCAGAAAGAA
                      ____________________________________________________________
consensus             AAGCCCCGTTCTTTACAGAGAAATCAAAACTTCCAGTAAAGTTCACTTATTCAGAAAGAA
 
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JMFS098A07+           ATCAAACTCCAAATTTCCGGCTGTTTAAAAGAGACCAAGGAGAACTGAAATTGATGAAAA
JMFS163C06+           ATCAAACTCCAAATTTCCGGCTGTTTAAAAGAGACCAAGGAGAACTGAAATTGATGAAAA
JMSF046M19+           ATCAAACTCCAAATTTCCGGCTGTTTAAAAGAGACCAAGGAGAACTGAAATTGATGAAAA
JMFS052H03+                                   TTAAAAGAGACCAAGCAGAACTGAAATTGATGAAAA
JMFS040D11+                                          AGACCAAGGAGAACTGAAATTGATGANAA
                      ____________________________________________________________
consensus             ATCAAACTCCAAATTTCCGGCTGTTTAAAAGAGACCAAGGAGAACTGAAATTGATGAAAA
 
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JMFS098A07+           TGTCCCTGAATCTTTTTGAGCTCAGTTTCTTGAAATAAATAACACTACAGAGATAAGGTA
JMFS163C06+           TGTCCCTGAATCTTTTTGAGCTCAGTTTCTTGAAATAAATAACACTACAGAGATAAGGTA
JMSF046M19+           TGTCCCTGAATCTTTTTGAGCTCAGTTTCTTGAAATAAATAACACTACAGAGATAAGGTA
JMFS052H03+           TGTCCCTGAATCTTTTTGAGCTCAGTTTCTTGAAATAAATAACACTACAGAGATAAGGTA
JMFS040D11+           TGTCCCTGAATCTTTTTGAGCTCAGTTTCTTGAAATAAATAACACTACAGAGATAAGGTA
JMFS094D09+                                         TGAAATAAATAACACTACAGAGATAAGGTA
                      ____________________________________________________________
consensus             TGTCCCTGAATCTTTTTGAGCTCAGTTTCTTGAAATAAATAACACTACAGAGATAAGGTA
 
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JMFS098A07+           CCACTGTATTTAATAGACATTGAAGGTGAACAAAATGCGGACAGGCAATTACTGAACCGG
JMFS163C06+           CCACTGTATTTAATAGACATTGAAGGTGAACAAAATGCGGACAGGCAATTACTGAACCGG
JMSF046M19+           CCACTGTATTTAATAGACATTGAAGGTGAACAAAATGCGGACAGGCAATTACTGAACCGG
JMFS052H03+           CCACTGTATTTAATAGACATTGAAGGTGAACAAAATGCGGACAGGCAATTACTGAACCGG
JMFS040D11+           CCACTGTATTTAATAGACATTGAAGGTGAACAAAATGCGGACAGGCAATTACTGAACCGG
JMFF019I16+                  ATTTAATAGACATTGAAGGTGAACAAAATGCGGACAGGCAATTACTGAACCGG
JMFF009B24+                 TATTTAATAGACATTGAAGGTGAACAAAATGCGGACAGGCAATTACTGAACCGG
JMFS094D09+           CCACTGTATTTAATAGACATTGAAGGTGAACAAAATGCGGACAGGCAATTACTGAACCGG
                      ____________________________________________________________
consensus             CCACTGTATTTAATAGACATTGAAGGTGAACAAAATGCGGACAGGCAATTACTGAACCGG
 
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JMFS098A07+           GACGGCGCTATCCCCAGCACCAAGCACAAGGCAACTATACTGAACCTCACGATTTCAGAG
JMFS163C06+           GACGGCGCTATCCCCAGCACCAAGCACAAGGCAACTATACTGAACCTCACGATTTCAGAG
JMSF046M19+           GACGGCGCTATCCCCAGCACCAAGCACAAGGCAACTATACTGAACCTCACGATTTCAGAG
JMFS052H03+           GACGGCGCTATCCCCAGCACCAAGCACAAGGCAACTATACTGAACCTCACGATTTCAGAG
JMFS040D11+           GACGGCGCTATCCCCAGCACCAAGCACAAGGCAACTATACTGAACCTCACGATTTCAGAG
JMFF019I16+           GACGGCGCTATCCCCAGCACCAAGCACAAGGCAACTATACTGAACCTCACGATTTCAGAG
JMFF009B24+           GACGGCGCTATCCCCAGCACCAAGCACAAGGCAACTATACTGAACCTCACGATTTCAGAG
JMFS094D09+           GACGGCGCTATCCCCAGCACCAAGCACAAGGCAACTATACTGAACCTCACGATTTCAGAG
                      ____________________________________________________________
consensus             GACGGCGCTATCCCCAGCACCAAGCACAAGGCAACTATACTGAACCTCACGATTTCAGAG
 
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JMFS098A07+           CCCCCAAACAACCATCAGATATGTACTTTTCCCAGCTTCCAAAACCACAGACAGCCCTTA
JMFS163C06+           CCCCCAAACAACCATCAGATATGTACTTTTCCCAGCTTCCAAAACCACAGACAGCCCTTA
JMSF046M19+           CCCCCAAACAACCATCAGATATGTACTTTTCCCAGCTTCCAAAACCACAGACAGCCCTTA
JMFS052H03+           CCCCCAAACAACCATCAGATATGTACTTTTCCCAGCTTCCAAAACCACAGACAGCCCTTA
JMFS040D11+           CCCCCAAACAACCATCAGATATGTACTTTTCCCAGCTTCCAAAACCACAGACAGCCCTTA
JMFF019I16+           CCCCCAAACAACCATCAGATATGTACTTTTCCCAGCTTCCAAAACCACAGACAGCCCTTA
JMFF009B24+           CCCCCAAACAACCATCAGATATGTACTTTTCCCAGCTTCCAAAACCACAGACAGCCCTTA
JMFS094D09+           CCCCCAAACAACCATCAGATATGTACTTTTCCCAGCTTCCAAAACCACAGACAGCCCTTA
                      ____________________________________________________________
consensus             CCCCCAAACAACCATCAGATATGTACTTTTCCCAGCTTCCAAAACCACAGACAGCCCTTA
 
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JMFS098A07+           ATATTATATTTCAACTCCC                                         
JMFS163C06+           ATATTATATTTCAACTCCCACATAACCAACGATCATTTTCCCTAATATAATTCCACTTTC
JMSF046M19+           ATATTATATTTCAACTCCCACATAACCAACGATCATTTTCCCTAATATAATTCCACTTTC
JMFS052H03+           ATATTATATTTCAACTCCCACATAACCAACGATCATTTTCCCTAATATAATTCCACTTTC
JMFS040D11+           ATATTATATTTCAACTCCCACATAACCAACGATCATTTTCCCTAATATAATTCCACTTTC
JMFF019I16+           ATATTATATTTCAACTCCCACATAACCAACGATCATTTTCCCTAATATAATTCCACTTTC
JMFF009B24+           ATATTATATTTCAACTCCCACATAACCAACGATCATTTTCCCTAATATAATTCCACTTTC
JMFS094D09+           ATATTATATTTCAACTCCCACATAACCAACGATCATTTTCCCTAATATAATTCCACTTTC
                      ____________________________________________________________
consensus             ATATTATATTTCAACTCCCACATAACCAACGATCATTTTCCCTAATATAATTCCACTTTC
 
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JMFS163C06+           TCAACACCTACAGCGACACAGGAATCAACACCAAACCTTCGGATCTCGAAACGAAGACTG
JMSF046M19+           TCAACACCTACAGCGACACAGGAATCAACACCAAACCTTCGGATCTCGAAACGAAGACTG
JMFS052H03+           TCAACACCTACAGCGACACAGGAATCAACACCAAACCTTCGGATCTCGAAACGAAGACTG
JMFS040D11+           TCAACACCTACAGCGACACAGGAATCAACACCAAACCTTCGGATCTCGAAACGAAGACTG
JMFF019I16+           TCAACACCTACAGCGACACAGGAATCAACACCAAACCTTCGGATCTCGAAACGAAGACTG
JMFF009B24+           TCAACACCTACAGCGACACAGGAATCAACACCAAACCTTCGGATCTCGAAACGAAGACTG
JMFS094D09+           TCAACACCTACAGCGACACAGGAATCAACACCAAACCTTCGGATCTCGAAACGAAGACTG
                      ____________________________________________________________
consensus             TCAACACCTACAGCGACACAGGAATCAACACCAAACCTTCGGATCTCGAAACGAAGACTG
 
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JMFS163C06+           CGACATGAAACTCTGGTAAAGATCGGAGCTTTG                           
JMSF046M19+           CGACATGAAACTCTGGTAAAGATCGGAGCTTTGAGCCGAATGAGAAAGGCCCAGAAATGG
JMFS052H03+           CGACATGAAACTCTGGTAAAGATCGGAGCTTTGAGCCGAATGAGAAAGGCCCAGAAATGG
JMFS040D11+           CGACATGAAACTCTGGTAAAGATCGGAGCTTTGAGCCGAATGAGAAAGGCCCAGAAATGG
JMFF019I16+           CGACATGAAACTCTGGTAAAGATCGGAGCTTTGAGCCGAATGAGAAAGGCCCAGAAATGG
JMFF009B24+           CGACATGAAACTCTGGTAAAGATCGGAGCTTTGAGCCGAATGAGAAAGGCCCAGAAATGG
JMFS094D09+           CGACATGAAACTCTGGTAAAGATCGGAGCTTTGAGCCGAATGAGAAAGGCCCAGAAATGG
                      ____________________________________________________________
consensus             CGACATGAAACTCTGGTAAAGATCGGAGCTTTGAGCCGAATGAGAAAGGCCCAGAAATGG
 
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JMSF046M19+           TTCTTCATCGTTTGATGCTATCCTCCATCATCTCTTCTCTCTCACACTTGCTTTCATGCA
JMFS052H03+           TTCTTCATCGTTTGATGCTATCCTCCATCATCTCTTCTCTCTCACACTTGCTTTCATGCA
JMFS040D11+           TTCTTCATCGTTTGATGCTATCCTCCATCATCTCTTCTCTCTCACACTTGCTTTCATGCA
JMFF019I16+           TTCTTCATCGTTTGATGCTATCCCCCATCATCTCTTCTCTCTCACACTTGCTTTCATGCA
JMFF009B24+           TTCTTCATCGTTTGATGCTATCCCCCATCATCTCTTCTCTCTCACACTTGCTTTCATGCA
JMFS094D09+           TTCTTCATCGTTTGATGCTATCCTCCATCATCTCTTCTCTCTCACACTTGCTTTCATGCA
                      ____________________________________________________________
consensus             TTCTTCATCGTTTGATGCTATCCTCCATCATCTCTTCTCTCTCACACTTGCTTTCATGCA
 
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JMSF046M19+           CAGTCCATCCCGC                                               
JMFS052H03+           CAGTCCATCCCGCACACATACATACATGCACAGACCTGAAAGACAGATAGGAGGGAGTGT
JMFS040D11+           CAGTCCATCCCGCACACATACATACATGCACAGACCTGAAAGACAGATAGGAGGGAGTGT
JMFF019I16+           CAGTCCATCCCGCACACATACATACATGCACAGACCTGAAAGACAGATAGGAGGGAGTGT
JMFF009B24+           CAGTCCATCCCGCACACATACATACATGCACAGACCTGAAAGACAGATAGGAGGGAGTGT
JMFS094D09+           CAGTCCATCCCGCACACATACATACATGCACAGACCTGAAAGACAGATAGGAGGGAGTGT
                      ____________________________________________________________
consensus             CAGTCCATCCCGCACACATACATACATGCACAGACCTGAAAGACAGATAGGAGGGAGTGT
 
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JMFS052H03+           GGTGATAGTGATG                                               
JMFS040D11+           GGTGATGGTGATGGTGATGTTGAGGAGGAGTGGATCTTGGGTTGA               
JMFF019I16+           GGTGATGGTGATGGTGATGTTGAGGAGGAGTGGATCTTGGGTTGATGCAACGAAT     
JMFF009B24+           GGTGATGGTGATGGTGATGTTGAGGAGGAGTGGATCTTGGGTTGATGCAACGAAT     
JMFS094D09+           GGTGATGGTGATGGTGATGTTGAGGAGGAGTGGATCTTGGGTTGATGCAATGAATGGGTT
                      ____________________________________________________________
consensus             GGTGATGGTGATGGTGATGTTGAGGAGGAGTGGATCTTGGGTTGATGCAACGAATGGGTT
 
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JMFS094D09+           TTGAGTAAAATGGAGAAAGGTAATAAATTTAAGTCACCAAGAGATAAACCATGGATTCTG
                      ____________________________________________________________
consensus             TTGAGTAAAATGGAGAAAGGTAATAAATTTAAGTCACCAAGAGATAAACCATGGATTCTG