Contig 009065:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF009B24Sequence529009065 (8)779004689 (5)gb|AFY06670.1|306homeobox-leucine zipper protein ATHB-15-like protein [Nicotiana tabacum]
JMFF019I16Sequence528009065 (8)766004689 (5)gb|AFY06670.1|363homeobox-leucine zipper protein ATHB-15-like protein [Nicotiana tabacum]
JMFS040D11Sequence614009065 (8)
JMFS052H03Sequence597009065 (8)
JMFS094D09Sequence630009065 (8)
JMFS098A07Sequence642009065 (8)ref|XP_010098130.1|7e-41Homeobox-leucine zipper protein ATHB-15 [Morus notabilis] gb|EXB74567.1| Homeobo
JMFS163C06Sequence585009065 (8)
JMSF046M19Sequence705009065 (8)760004689 (5)ref|XP_002515977.1|1e-104DNA binding protein, putative [Ricinus communis] gb|EEF46397.1| DNA binding prot

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS098A07+ TGAAGCCTTGAGGCTTCTTTCCT
                      ____________________________________________________________
consensus TGAAGCCTTGAGGCTTCTTTCCT
 
. : . : . : . : . : . :
JMFS098A07+ CTGTTTCTCCCTGCATCTTCGATTTTGAAACCAAACTTTGATTTGCTTAGGCTCAATATT
                      ____________________________________________________________
consensus CTGTTTCTCCCTGCATCTTCGATTTTGAAACCAAACTTTGATTTGCTTAGGCTCAATATT
 
. : . : . : . : . : . :
JMFS098A07+ GCAGAGAATAGGGCATTCACGAATCAGCTGCTGACGACGCATAGAACTGGGTTTGGGGCA
                      ____________________________________________________________
consensus GCAGAGAATAGGGCATTCACGAATCAGCTGCTGACGACGCATAGAACTGGGTTTGGGGCA
 
. : . : . : . : . : . :
JMFS098A07+ CTCATGATAAACCCTCTCAAGGGCTTCAACCTGCTCAGGTGTGTAGCGGACATATTTGCC
JMFS163C06+ GACATATTTGCC
JMSF046M19+ TGCTCAGGTGTGTAGCGGACATATTTGCC
                      ____________________________________________________________
consensus CTCATGATAAACCCTCTCAAGGGCTTCAACCTGCTCAGGTGTGTAGCGGACATATTTGCC
 
. : . : . : . : . : . :
JMFS098A07+ GTCCACGGCTGACTTACCATCCTTGCAGGAAATTGACATCTTGTTTCCTCAAAACCTCAA
JMFS163C06+ GTCCACGGCTGACTTACCATCCTTGCAGGAAATTGACATCTTGTTTCCTCAAAACCTCAA
JMSF046M19+ GTCCACGGCTGACTTACCATCCTTGCAGGAAATTGACATCTTGTTTCCTCAAAACCTCAA
                      ____________________________________________________________
consensus GTCCACGGCTGACTTACCATCCTTGCAGGAAATTGACATCTTGTTTCCTCAAAACCTCAA
 
. : . : . : . : . : . :
JMFS098A07+ AAGCCCCGTTCTTTACAGAGAAATCAAAACTTCCAGTAAAGTTCACTTATTCAGAAAGAA
JMFS163C06+ AAGCCCCGTTCTTTACAGAGAAATCAAAACTTCCAGTAAAGTTCACTTATTCAGAAAGAA
JMSF046M19+ AAGCCCCGTTCTTTACAGAGAAATCAAAACTTCCAGTAAAGTTCACTTATTCAGAAAGAA
                      ____________________________________________________________
consensus AAGCCCCGTTCTTTACAGAGAAATCAAAACTTCCAGTAAAGTTCACTTATTCAGAAAGAA
 
. : . : . : . : . : . :
JMFS098A07+ ATCAAACTCCAAATTTCCGGCTGTTTAAAAGAGACCAAGGAGAACTGAAATTGATGAAAA
JMFS163C06+ ATCAAACTCCAAATTTCCGGCTGTTTAAAAGAGACCAAGGAGAACTGAAATTGATGAAAA
JMSF046M19+ ATCAAACTCCAAATTTCCGGCTGTTTAAAAGAGACCAAGGAGAACTGAAATTGATGAAAA
JMFS052H03+ TTAAAAGAGACCAAGCAGAACTGAAATTGATGAAAA
JMFS040D11+ AGACCAAGGAGAACTGAAATTGATGANAA
                      ____________________________________________________________
consensus ATCAAACTCCAAATTTCCGGCTGTTTAAAAGAGACCAAGGAGAACTGAAATTGATGAAAA
 
. : . : . : . : . : . :
JMFS098A07+ TGTCCCTGAATCTTTTTGAGCTCAGTTTCTTGAAATAAATAACACTACAGAGATAAGGTA
JMFS163C06+ TGTCCCTGAATCTTTTTGAGCTCAGTTTCTTGAAATAAATAACACTACAGAGATAAGGTA
JMSF046M19+ TGTCCCTGAATCTTTTTGAGCTCAGTTTCTTGAAATAAATAACACTACAGAGATAAGGTA
JMFS052H03+ TGTCCCTGAATCTTTTTGAGCTCAGTTTCTTGAAATAAATAACACTACAGAGATAAGGTA
JMFS040D11+ TGTCCCTGAATCTTTTTGAGCTCAGTTTCTTGAAATAAATAACACTACAGAGATAAGGTA
JMFS094D09+ TGAAATAAATAACACTACAGAGATAAGGTA
                      ____________________________________________________________
consensus TGTCCCTGAATCTTTTTGAGCTCAGTTTCTTGAAATAAATAACACTACAGAGATAAGGTA
 
. : . : . : . : . : . :
JMFS098A07+ CCACTGTATTTAATAGACATTGAAGGTGAACAAAATGCGGACAGGCAATTACTGAACCGG
JMFS163C06+ CCACTGTATTTAATAGACATTGAAGGTGAACAAAATGCGGACAGGCAATTACTGAACCGG
JMSF046M19+ CCACTGTATTTAATAGACATTGAAGGTGAACAAAATGCGGACAGGCAATTACTGAACCGG
JMFS052H03+ CCACTGTATTTAATAGACATTGAAGGTGAACAAAATGCGGACAGGCAATTACTGAACCGG
JMFS040D11+ CCACTGTATTTAATAGACATTGAAGGTGAACAAAATGCGGACAGGCAATTACTGAACCGG
JMFF019I16+ ATTTAATAGACATTGAAGGTGAACAAAATGCGGACAGGCAATTACTGAACCGG
JMFF009B24+ TATTTAATAGACATTGAAGGTGAACAAAATGCGGACAGGCAATTACTGAACCGG
JMFS094D09+ CCACTGTATTTAATAGACATTGAAGGTGAACAAAATGCGGACAGGCAATTACTGAACCGG
                      ____________________________________________________________
consensus CCACTGTATTTAATAGACATTGAAGGTGAACAAAATGCGGACAGGCAATTACTGAACCGG
 
. : . : . : . : . : . :
JMFS098A07+ GACGGCGCTATCCCCAGCACCAAGCACAAGGCAACTATACTGAACCTCACGATTTCAGAG
JMFS163C06+ GACGGCGCTATCCCCAGCACCAAGCACAAGGCAACTATACTGAACCTCACGATTTCAGAG
JMSF046M19+ GACGGCGCTATCCCCAGCACCAAGCACAAGGCAACTATACTGAACCTCACGATTTCAGAG
JMFS052H03+ GACGGCGCTATCCCCAGCACCAAGCACAAGGCAACTATACTGAACCTCACGATTTCAGAG
JMFS040D11+ GACGGCGCTATCCCCAGCACCAAGCACAAGGCAACTATACTGAACCTCACGATTTCAGAG
JMFF019I16+ GACGGCGCTATCCCCAGCACCAAGCACAAGGCAACTATACTGAACCTCACGATTTCAGAG
JMFF009B24+ GACGGCGCTATCCCCAGCACCAAGCACAAGGCAACTATACTGAACCTCACGATTTCAGAG
JMFS094D09+ GACGGCGCTATCCCCAGCACCAAGCACAAGGCAACTATACTGAACCTCACGATTTCAGAG
                      ____________________________________________________________
consensus GACGGCGCTATCCCCAGCACCAAGCACAAGGCAACTATACTGAACCTCACGATTTCAGAG
 
. : . : . : . : . : . :
JMFS098A07+ CCCCCAAACAACCATCAGATATGTACTTTTCCCAGCTTCCAAAACCACAGACAGCCCTTA
JMFS163C06+ CCCCCAAACAACCATCAGATATGTACTTTTCCCAGCTTCCAAAACCACAGACAGCCCTTA
JMSF046M19+ CCCCCAAACAACCATCAGATATGTACTTTTCCCAGCTTCCAAAACCACAGACAGCCCTTA
JMFS052H03+ CCCCCAAACAACCATCAGATATGTACTTTTCCCAGCTTCCAAAACCACAGACAGCCCTTA
JMFS040D11+ CCCCCAAACAACCATCAGATATGTACTTTTCCCAGCTTCCAAAACCACAGACAGCCCTTA
JMFF019I16+ CCCCCAAACAACCATCAGATATGTACTTTTCCCAGCTTCCAAAACCACAGACAGCCCTTA
JMFF009B24+ CCCCCAAACAACCATCAGATATGTACTTTTCCCAGCTTCCAAAACCACAGACAGCCCTTA
JMFS094D09+ CCCCCAAACAACCATCAGATATGTACTTTTCCCAGCTTCCAAAACCACAGACAGCCCTTA
                      ____________________________________________________________
consensus CCCCCAAACAACCATCAGATATGTACTTTTCCCAGCTTCCAAAACCACAGACAGCCCTTA
 
. : . : . : . : . : . :
JMFS098A07+ ATATTATATTTCAACTCCC
JMFS163C06+ ATATTATATTTCAACTCCCACATAACCAACGATCATTTTCCCTAATATAATTCCACTTTC
JMSF046M19+ ATATTATATTTCAACTCCCACATAACCAACGATCATTTTCCCTAATATAATTCCACTTTC
JMFS052H03+ ATATTATATTTCAACTCCCACATAACCAACGATCATTTTCCCTAATATAATTCCACTTTC
JMFS040D11+ ATATTATATTTCAACTCCCACATAACCAACGATCATTTTCCCTAATATAATTCCACTTTC
JMFF019I16+ ATATTATATTTCAACTCCCACATAACCAACGATCATTTTCCCTAATATAATTCCACTTTC
JMFF009B24+ ATATTATATTTCAACTCCCACATAACCAACGATCATTTTCCCTAATATAATTCCACTTTC
JMFS094D09+ ATATTATATTTCAACTCCCACATAACCAACGATCATTTTCCCTAATATAATTCCACTTTC
                      ____________________________________________________________
consensus ATATTATATTTCAACTCCCACATAACCAACGATCATTTTCCCTAATATAATTCCACTTTC
 
. : . : . : . : . : . :
JMFS163C06+ TCAACACCTACAGCGACACAGGAATCAACACCAAACCTTCGGATCTCGAAACGAAGACTG
JMSF046M19+ TCAACACCTACAGCGACACAGGAATCAACACCAAACCTTCGGATCTCGAAACGAAGACTG
JMFS052H03+ TCAACACCTACAGCGACACAGGAATCAACACCAAACCTTCGGATCTCGAAACGAAGACTG
JMFS040D11+ TCAACACCTACAGCGACACAGGAATCAACACCAAACCTTCGGATCTCGAAACGAAGACTG
JMFF019I16+ TCAACACCTACAGCGACACAGGAATCAACACCAAACCTTCGGATCTCGAAACGAAGACTG
JMFF009B24+ TCAACACCTACAGCGACACAGGAATCAACACCAAACCTTCGGATCTCGAAACGAAGACTG
JMFS094D09+ TCAACACCTACAGCGACACAGGAATCAACACCAAACCTTCGGATCTCGAAACGAAGACTG
                      ____________________________________________________________
consensus TCAACACCTACAGCGACACAGGAATCAACACCAAACCTTCGGATCTCGAAACGAAGACTG
 
. : . : . : . : . : . :
JMFS163C06+ CGACATGAAACTCTGGTAAAGATCGGAGCTTTG
JMSF046M19+ CGACATGAAACTCTGGTAAAGATCGGAGCTTTGAGCCGAATGAGAAAGGCCCAGAAATGG
JMFS052H03+ CGACATGAAACTCTGGTAAAGATCGGAGCTTTGAGCCGAATGAGAAAGGCCCAGAAATGG
JMFS040D11+ CGACATGAAACTCTGGTAAAGATCGGAGCTTTGAGCCGAATGAGAAAGGCCCAGAAATGG
JMFF019I16+ CGACATGAAACTCTGGTAAAGATCGGAGCTTTGAGCCGAATGAGAAAGGCCCAGAAATGG
JMFF009B24+ CGACATGAAACTCTGGTAAAGATCGGAGCTTTGAGCCGAATGAGAAAGGCCCAGAAATGG
JMFS094D09+ CGACATGAAACTCTGGTAAAGATCGGAGCTTTGAGCCGAATGAGAAAGGCCCAGAAATGG
                      ____________________________________________________________
consensus CGACATGAAACTCTGGTAAAGATCGGAGCTTTGAGCCGAATGAGAAAGGCCCAGAAATGG
 
. : . : . : . : . : . :
JMSF046M19+ TTCTTCATCGTTTGATGCTATCCTCCATCATCTCTTCTCTCTCACACTTGCTTTCATGCA
JMFS052H03+ TTCTTCATCGTTTGATGCTATCCTCCATCATCTCTTCTCTCTCACACTTGCTTTCATGCA
JMFS040D11+ TTCTTCATCGTTTGATGCTATCCTCCATCATCTCTTCTCTCTCACACTTGCTTTCATGCA
JMFF019I16+ TTCTTCATCGTTTGATGCTATCCCCCATCATCTCTTCTCTCTCACACTTGCTTTCATGCA
JMFF009B24+ TTCTTCATCGTTTGATGCTATCCCCCATCATCTCTTCTCTCTCACACTTGCTTTCATGCA
JMFS094D09+ TTCTTCATCGTTTGATGCTATCCTCCATCATCTCTTCTCTCTCACACTTGCTTTCATGCA
                      ____________________________________________________________
consensus TTCTTCATCGTTTGATGCTATCCTCCATCATCTCTTCTCTCTCACACTTGCTTTCATGCA
 
. : . : . : . : . : . :
JMSF046M19+ CAGTCCATCCCGC
JMFS052H03+ CAGTCCATCCCGCACACATACATACATGCACAGACCTGAAAGACAGATAGGAGGGAGTGT
JMFS040D11+ CAGTCCATCCCGCACACATACATACATGCACAGACCTGAAAGACAGATAGGAGGGAGTGT
JMFF019I16+ CAGTCCATCCCGCACACATACATACATGCACAGACCTGAAAGACAGATAGGAGGGAGTGT
JMFF009B24+ CAGTCCATCCCGCACACATACATACATGCACAGACCTGAAAGACAGATAGGAGGGAGTGT
JMFS094D09+ CAGTCCATCCCGCACACATACATACATGCACAGACCTGAAAGACAGATAGGAGGGAGTGT
                      ____________________________________________________________
consensus CAGTCCATCCCGCACACATACATACATGCACAGACCTGAAAGACAGATAGGAGGGAGTGT
 
. : . : . : . : . : . :
JMFS052H03+ GGTGATAGTGATG
JMFS040D11+ GGTGATGGTGATGGTGATGTTGAGGAGGAGTGGATCTTGGGTTGA
JMFF019I16+ GGTGATGGTGATGGTGATGTTGAGGAGGAGTGGATCTTGGGTTGATGCAACGAAT
JMFF009B24+ GGTGATGGTGATGGTGATGTTGAGGAGGAGTGGATCTTGGGTTGATGCAACGAAT
JMFS094D09+ GGTGATGGTGATGGTGATGTTGAGGAGGAGTGGATCTTGGGTTGATGCAATGAATGGGTT
                      ____________________________________________________________
consensus GGTGATGGTGATGGTGATGTTGAGGAGGAGTGGATCTTGGGTTGATGCAACGAATGGGTT
 
. : . : . : . : . : . :
JMFS094D09+ TTGAGTAAAATGGAGAAAGGTAATAAATTTAAGTCACCAAGAGATAAACCATGGATTCTG
                      ____________________________________________________________
consensus TTGAGTAAAATGGAGAAAGGTAATAAATTTAAGTCACCAAGAGATAAACCATGGATTCTG