| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF001E24 | Sequence | 724 | 009063 (8) | ref|XP_006340819.1| | 3e-30 | PREDICTED: adipocyte plasma membrane-associated protein-like [Solanum tuberosum | |||||
| JMFN036F15 | Sequence | 346 | 009063 (8) | ref|XP_004232552.1| | 1e-35 | PREDICTED: protein YLS2 [Solanum lycopersicum] | |||||
| JMFN036H11 | Sequence | 612 | 009063 (8) | emb|CDP01813.1| | 2e-98 | unnamed protein product [Coffea canephora] | |||||
| JMFN036H12 | Sequence | 516 | 009063 (8) | emb|CDP01813.1| | 5e-80 | unnamed protein product [Coffea canephora] | |||||
| JMFS088A10 | Sequence | 634 | 009063 (8) | emb|CDP01813.1| | 8e-83 | unnamed protein product [Coffea canephora] | |||||
| JMSF015P16 | Sequence | 648 | 009063 (8) | ref|XP_009784074.1| | 3e-106 | PREDICTED: protein YLS2-like [Nicotiana sylvestris] | |||||
| JMSF045J24 | Sequence | 702 | 009063 (8) | emb|CDP01813.1| | 2e-103 | unnamed protein product [Coffea canephora] | |||||
| JMSF048A13 | Sequence | 674 | 009063 (8) | ref|XP_006340819.1| | 2e-38 | PREDICTED: adipocyte plasma membrane-associated protein-like [Solanum tuberosum | |||||
This contig is upended
. : . : . : . : . : . :
rJMFF001E24- ATAAATAGTTACAAAAGTGTCATCAACACAATTTCATATCAAAATATA
____________________________________________________________
consensus ATAAATAGTTACAAAAGTGTCATCAACACAATTTCATATCAAAATATA
. : . : . : . : . : . :
rJMFF001E24- TAAAATATAACAATAAGGGTAAAAGAAAAAAGATGACCAAGTCATTACCTCCTCCTTCTC
____________________________________________________________
consensus TAAAATATAACAATAAGGGTAAAAGAAAAAAGATGACCAAGTCATTACCTCCTCCTTCTC
. : . : . : . : . : . :
rJMFF001E24- TGCCTTAATTGAAAGCACTCCATTTATTTGATTCCTGGAAGAAGCCATCTGTCATCTTTC
rJMSF048A13- GAAAGCACTCCATTTATTTGATTCCTGGAAGAAGCCATCTGTCATCTTTC
____________________________________________________________
consensus TGCCTTAATTGAAAGCACTCCATTTATTTGATTCCTGGAAGAAGCCATCTGTCATCTTTC
. : . : . : . : . : . :
rJMFF001E24- TTCTGTCAAATATAATGCCACTATTTAACTCATTATGTAATTTACACTCAGACAAGTGTA
rJMSF048A13- TTCTGTCAAATATAATGCCACTATTTAACTCATTATGTAATTTACACTCAGACAAGTGTA
____________________________________________________________
consensus TTCTGTCAAATATAATGCCACTATTTAACTCATTATGTAATTTACACTCAGACAAGTGTA
. : . : . : . : . : . :
rJMFF001E24- ATGTAAGGGATCTTATTCCTCTTAAATTATACTACTTACAACTTTGATAGAAGAATATCA
rJMSF048A13- ATGTAAGGGATCTTATTCCTCTTAAATTATACTACTTACAACTTTGATAGAAGAATATCA
____________________________________________________________
consensus ATGTAAGGGATCTTATTCCTCTTAAATTATACTACTTACAACTTTGATAGAAGAATATCA
. : . : . : . : . : . :
rJMFF001E24- AACTGTTGCAGTTGTGGCCGGCAACATTAACTCAGCCAGCCAAGAGTGTAATACAAAGCT
rJMSF048A13- AACTGTTGCAGTTGTGGCCGGCAACATTAACTCAGCCAGCCAAGAGTGTAATACAAAGCT
____________________________________________________________
consensus AACTGTTGCAGTTGTGGCCGGCAACATTAACTCAGCCAGCCAAGAGTGTAATACAAAGCT
. : . : . : . : . : . :
rJMFF001E24- AAGGGATTTGATCCTTTTAAAATTTAAACTAAGAAGAAACACTACAAGCCAGAAAACATG
rJMSF048A13- AAGGGATTTGATCCTTTTAAAATTTAAACTAAGAAGAAACACTACAAGCCAGAAAACATG
____________________________________________________________
consensus AAGGGATTTGATCCTTTTAAAATTTAAACTAAGAAGAAACACTACAAGCCAGAAAACATG
. : . : . : . : . : . :
rJMFF001E24- GAAACTGGGGGTTTAATTTGCAGAAGTCATTGGCATTTCATCCACTTGCAATTATATTGC
rJMSF048A13- GAAACTGGGGGTTTAATTTGCAGAAGTCATTGGCATTTCATCCACTTGCAATTATATTGC
rJMSF015P16- CTTGCAATTATATTGC
____________________________________________________________
consensus GAAACTGGGGGTTTAATTTGCAGAAGTCATTGGCATTTCATCCACTTGCAATTATATTGC
. : . : . : . : . : . :
rJMFF001E24- AGGGTTTTGAGTGAGATTGAGCCTAAGTATGAAACCATTCACAACAAAACCACAGTACAT
rJMSF048A13- AGGGTTTTGAGTGAGATTGAGCCTAAGTATGAAACCATTCACAACAAAACCACAGTACAT
rJMSF015P16- AGGGTTTTGAGTGAGATTGAGCCTAAGTATGAAACCATTCACAACAAAACCACAGTACAT
____________________________________________________________
consensus AGGGTTTTGAGTGAGATTGAGCCTAAGTATGAAACCATTCACAACAAAACCACAGTACAT
. : . : . : . : . : . :
rJMFF001E24- ATAATCGCCAATCTTGATCCCCGTCGAGACCATTATAAAATCATTTTCGTAGTAGTGAGC
rJMSF048A13- ATAATCGCCAATCTTGATCCCCGTCGAGACCATTATAAAATCATTTTCGTAGTAGTGAGC
rJMSF015P16- ATAATCGCCAATCTTGATCCCCGTCGAGACCATTATAAAATCATTTTCGTAGTAGTGAGC
____________________________________________________________
consensus ATAATCGCCAATCTTGATCCCCGTCGAGACCATTATAAAATCATTTTCGTAGTAGTGAGC
. : . : . : . : . : . :
rJMFF001E24- AACTGGATTTCCTTCCAAATCCACAACGAAAACCCCTCCATTCTTCTCCATCTTTGGCCT
rJMSF048A13- AACTGGATTTCCTTCCAAATCCACAACGAAAACCCCTCCATTCTTCTCCATCTTTGGCCT
rJMSF015P16- AACTGGATTTCCTTCCAAATCCACAACGAAAACCCCTCCATTCTTCTCCATCTTTGGCCT
____________________________________________________________
consensus AACTGGATTTCCTTCCAAATCCACAACGAAAACCCCTCCATTCTTCTCCATCTTTGGCCT
. : . : . : . : . : . :
rJMFF001E24- CCCTACATACTTCTCCATCACTCCCAAAATCTTCCTTAAGAATGGGTACTTTTGTGCNAG
rJMSF048A13- CCCTACATACTTCTCCATCACTCCCAAAATCTTCCTTAAGAATGGGTACTTTTGTGCAAG
rJMSF015P16- CCCTACATACTTCTCCATCACTCCCAAAATCTTCCTTAAGAATGGGTACTTTTGTGCAAG
____________________________________________________________
consensus CCCTACATACTTCTCCATCACTCCCAAAATCTTCCTTAAGAATGGGTACTTTTGTGCAAG
. : . : . : . : . : . :
rJMFF001E24- CTCCCAACC
rJMSF048A13- CTCCCAACCATATGTGTATTC
rJMSF015P16- CTCCCAACCATATGTGTATTCGGTAACTAATCCAATCCAGAATAGGCCGTCTCCATCGTA
____________________________________________________________
consensus CTCCCAACCATATGTGTATTCGGTAACTAATCCAATCCAGAATAGGCCGTCTCCATCGTA
. : . : . : . : . : . :
rJMSF015P16- ACGAATGTTGTCTGGCATTCCTGGTAAATTCTCTATAAAAACATCCACAGATCCCTTCTT
JMFN036H11+ ATAAAAACATCCACAGATCCCTTCTT
____________________________________________________________
consensus ACGAATGTTGTCTGGCATTCCTGGTAAATTCTCTATAAAAACATCCACAGATCCCTTCTT
. : . : . : . : . : . :
rJMSF015P16- TTCACCCTTGAGGTACAACCTCTTACACCTCCTCAATGGGGTTTCACAAAAAATGACAAA
JMFN036H11+ NTCACCCTGAGGTNACAACCTCTTACACCTCCTCAATGGGGTTTCACAAAAAATGACAAA
JMSF045J24+ AATGACAAA
____________________________________________________________
consensus TTCACCCTTGGGTTACAACCTCTTACACCTCCTCAATGGGGTTTCACAAAAAATGACAAA
. : . : . : . : . : . :
rJMSF015P16- GCTCTGGTCTGGAAAGACAGCAACACCATTAGCAAAGAACAAGTCGTTGACCAACACTTT
JMFN036H11+ GCTCTGGTCTGGAAAGACAGCAACACCATTAGCAAAGAACAAGTCGTTGACCAACACTTT
JMFN036H12+ GGAAAGACAGCAACACCATTAGCAAAGAACAAGTCGTTGACCAACACTTT
JMSF045J24+ GCTNTGGTCTGGAAAGACAGCAACACCATTAGCAAAGAACAAGTCGTTGACCAACACTTT
____________________________________________________________
consensus GCTCTGGTCTGGAAAGACAGCAACACCATTAGCAAAGAACAAGTCGTTGACCAACACTTT
. : . : . : . : . : . :
rJMSF015P16- GGTCTGTTTAGTATGTGGATCATAGCTTAAAAGTCTGCCATAGGGTCTTCCATCAAAAAA
JMFN036H11+ GGTCTGTTTAGTATGTGGATCATAGCTTAAAAGTCTGCCATAGGGTCTTCCATCAAAAAA
JMFN036H12+ GGTCTGTTTAGTATGTGGATCATAGCTTAAAAGTCTGCCATAGGGTCTTCCATCAAAAAA
JMSF045J24+ GGTCTGTTTAGTATGTGGATCATAGCTTAAAAGTCTGCCATAGGGTCTTCCATCAAAAAA
JMFS088A10+ TTAAAAGTCTGCCATAGGGTCTTCCATCAAAANA
____________________________________________________________
consensus GGTCTGTTTAGTATGTGGATCATAGCTTAAAAGTCTGCCATAGGGTCTTCCATCAAAAAA
. : . : . : . : . : . :
rJMSF015P16- ATCCCAAATAAAATCATGTAGTCTGTATTTCCATGATGCATCTGTGAAATACAACAANCC
JMFN036H11+ ATCCCAAATAAAATCATGTAGTCTGTATTTCCATGATGCATCTGTGAAATACAACAAACC
JMFN036H12+ ATCCCAAATAAAATCATGTAGTCTGTATTTCCATGATGCATCTGTGAAATACAACAAACC
JMSF045J24+ ATCCCAAATAAAATCATGTAGTCTGTATTTCCATGATGCATCTGTGAAATACAACAAACC
JMFS088A10+ ATCCCAAATAAAATCATGTAGTCTGTATTTCCATGATGCATCTGTGAAATACAACAAACC
____________________________________________________________
consensus ATCCCAAATAAAATCATGTAGTCTGTATTTCCATGATGCATCTGTGAAATACAACAAACC
. : . : . : . : . : . :
rJMSF015P16- ATCCTCTGCAACGTCAACGGCATCCGTA
JMFN036H11+ ATCCTCTGCAACGTCAACGGCATCCGTAAGTTTGAACTTAACGCCGTCCGCCTCGTCCGT
JMFN036H12+ ATCCTCTGCAACGTCAACGGCATCCGTAAGTTTGAACTTAACGCCGTCCGCCTCGTCCGT
JMSF045J24+ ATCCTCTGCAACGTCAACGGCATCCGTAAGTTTGAACTTAACGCCGTCCGCCTCGTCCGT
JMFS088A10+ ATCCTCTGCAACGTCAACGGCATCCGTAAGTTTGAACTTAACGCCGTCCGCCTCGTCCGT
____________________________________________________________
consensus ATCCTCTGCAACGTCAACGGCATCCGTAAGTTTGAACTTAACGCCGTCCGCCTCGTCCGT
. : . : . : . : . : . :
JMFN036H11+ CAGCAGTTGCACTTTGCCGTCCGAGGTAACATTCAGTAATCCTATATAAGCATCGGCTAC
JMFN036H12+ CAGCAGTTGCACTTTGCCGTCCGAGGTAACATTCAGTAATCCTATATAAGCATCGGCTAC
JMSF045J24+ CAGCAGTTGCACTTTGCCGTCCGAGGTAACATTCAGTAATCCTATATAAGCATCGGCTAC
JMFS088A10+ CAGCAGTTGCACTTTGCCGTCCGAGGTAACATTCAGTAATCCTATATAAGCATCGGCTAC
____________________________________________________________
consensus CAGCAGTTGCACTTTGCCGTCCGAGGTAACATTCAGTAATCCTATATAAGCATCGGCTAC
. : . : . : . : . : . :
JMFN036H11+ GATGACTTCACCGTGAAGTCCATGAGCGAGTCCGAGCGGCCTGCCACCGGTGTTAACCCA
JMFN036H12+ GATGACTTCACCGTGAAGTCCATGAGCGAGTCCGAGCGGCCTGCCACCGGTGTTAACCCA
JMSF045J24+ GATGACTTCACCGTGAAGTCCATGAGCGAGTCCGAGCGGCCTGCCACCGGTGTTAACCCA
JMFN036F15+ CCA
JMFS088A10+ GATGACTTCACCGTGAAGTCCATGAGCGAGTCCGAGCGGCCTGCCACCGGTGTTAACCCA
____________________________________________________________
consensus GATGACTTCACCGTGAAGTCCATGAGCGAGTCCGAGCGGCCTGCCACCGGTGTTAACCCA
. : . : . : . : . : . :
JMFN036H11+ GTCCTCCACCGCCGAGTCAGCAGCCGACGACTCGTTCACGGTGACTCGCTTGACCCACCC
JMFN036H12+ GTCCTCCACCGCCGAGTCAGCAGCCGACGACTCGTTCACGGTGACTCGCTTGACCCACCC
JMSF045J24+ GTCCTCCACCGCCGAGTCAGCAGCCGACGACTCGTTCACGGTGACTCGCTTGACCCACCC
JMFN036F15+ GTCCTCCACCGCCGAGTCAGCAGCCGATGACTCGTTCACGGTGACTCGCTTGACCCACCC
JMFS088A10+ GTCCTCCACCGCCGAGTCAGCAGCCGACGACTCGTTCACGGTGACTCGCTTGACCCACCC
____________________________________________________________
consensus GTCCTCCACCGCCGAGTCAGCAGCCGACGACTCGTTCACGGTGACTCGCTTGACCCACCC
. : . : . : . : . : . :
JMFN036H11+ ATCCATACACCCCGTGTATATCACACCCGTCTTGGGGTCGTACACTATGTCCTCCGGCCC
JMFN036H12+ CCCCATACACCCCGTGTATATCACACCCGTCTTGGGGTCGTACACTATGTCCTCCGGCCC
JMSF045J24+ ATCCATACACCCCGTGTATATCACACCCGTCTTGGGGTCGTACACTATGTCCTCCGGCCC
JMFN036F15+ GTCCGCACACCCGGTGTATATCACACCCGTCTTGGGGTCGTAGGCTAGATCCTCCGGGCC
JMFS088A10+ ATCCATACACCCCGTGTATATCACACCCGTCTTGGGGTCGTACACTATGTCCTCCGGCCC
____________________________________________________________
consensus ATCCATACACCCCGTGTATATCACACCCGTCTTGGGGTCGTACACTATGTCCTCCGGCCC
. : . : . : . : . : . :
JMFN036H11+ CGACAGCCGGCCTACTCCTATCTTCTCGGAATCATGGAGCAAACGG
JMFN036H12+ CGACAGCCGGCCTACTCCTATCTTCTCGGAATCATGGAGCAAACGG
JMSF045J24+ CGACAGCCGGCCTACTCCTATCTTCTCGGAATCATGGAGCAAACGGCCGTTGCGCTTGGG
JMFN036F15+ CGAAAGCCGACCAACTCCAATCTTTTCGGAACCTTGGTGCATGCGGGAGTTACGCTTGGG
JMFS088A10+ CGACAGCCGGCCTACTCCTATCTTCTCGGAATCATGGAGCAAACGGCCGTTGCGCTTGGG
____________________________________________________________
consensus CGACAGCCGGCCTACTCCTATCTTCTCGGAATCATGGAGCAAACGGCCGTTGCGCTTGGG
. : . : . : . : . : . :
JMSF045J24+ GGCCACCGCCGGGCTCCCCTGAGTCAACTCGTGAGCGGGGTACGGGGCCGGGTCGAACGA
JMFN036F15+ GGCCGCCGCCGGCCTCCCCTGACTCAACTCGTGAGCGGGGTATGGGACCGGGTCGAACGA
JMFS088A10+ GGCCACCGCCGGGCTCCCCTGAGTCAACTCGTGAGCGGGGTACGGGGCCGGGTCGAACGA
____________________________________________________________
consensus GGCCACCGCCGGGCTCCCCTGAGTCAACTCGTGAGCGGGGTACGGGGCCGGGTCGAACGA
. : . : . : . : . : . :
JMSF045J24+ ATCGAGCTGGTATATGACGACGCCTAAAATCACTGGAACCAGAACAGCAAAGGGCCACAG
JMFN036F15+ GTCGAGCTGGTATACGATGACGCCTAAAATCACTGGCACCACAAACGCAAAGGGCCACAG
JMFS088A10+ ATCGAGCTGGTATATGACGACGCCTAAAATCACTGGAACCAGAACAGCAAAGGGCCACAG
____________________________________________________________
consensus ATCGAGCTGGTATATGACGACGCCTAAAATCACTGGAACCAGAACAGCAAAGGGCCACAG
. : . : . : . : . : . :
JMSF045J24+ A
JMFN036F15+ A
JMFS088A10+ ACCCACTCATCTTTGTTCGAAGGATTCTTATCTTGATTTTTTTTTTTTTTTTCACTCCAC
____________________________________________________________
consensus ACCCACTCATCTTTGTTCGAAGGATTCTTATCTTGATTTTTTTTTTTTTTTTCACTCCAC