| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF004E24 | Sequence | 271 | 009061 (6) | 606 | 002507 (3) | ref|XP_006342799.1| | 7e-44 | PREDICTED: kinesin-like protein KIF18B-like isoform X1 [Solanum tuberosum] | |||
| JMFF042H23 | Sequence | 613 | 009061 (6) | emb|CAN74575.1| | 4e-29 | hypothetical protein VITISV_000297 [Vitis vinifera] | |||||
| JMFS013B01 | Sequence | 621 | 009061 (6) | emb|CAN74575.1| | 1e-37 | hypothetical protein VITISV_000297 [Vitis vinifera] | |||||
| JMFS085E06 | Sequence | 625 | 009061 (6) | emb|CAN74575.1| | 3e-29 | hypothetical protein VITISV_000297 [Vitis vinifera] | |||||
| JMFS104G08 | Sequence | 622 | 009061 (6) | emb|CAN74575.1| | 5e-41 | hypothetical protein VITISV_000297 [Vitis vinifera] | |||||
| JMSF025P03 | Sequence | 630 | 009061 (6) | emb|CAN74575.1| | 7e-32 | hypothetical protein VITISV_000297 [Vitis vinifera] | 742 | 002507 (3) | ref|XP_006365838.1| | 1e-60 | PREDICTED: kinesin-related protein 6-like [Solanum tuberosum] |
This contig is upended
. : . : . : . : . : . :
JMFS104G08+ GAGAATAAAGTC
____________________________________________________________
consensus GAGAATAAAGTC
. : . : . : . : . : . :
JMFS104G08+ CTTCTGATACAGGAATACCTCCTGAATTTTGGGCAGTTGGGGTATATGGTTCAGAACCAG
JMSF025P03+ CCAG
JMFS013B01+ TTTGGGCAGTTGGGGTATATGGTTCAGAACCAG
____________________________________________________________
consensus CTTCTGATACAGGAATACCTCCTGAATTTTGGGCAGTTGGGGTATATGGTTCAGAACCAG
. : . : . : . : . : . :
JMFS104G08+ ATTCACCATTAAAATTGAGGTTTCTCATTAATCTTAAAAGCCTTTGTTTCTCTTCTACAG
JMSF025P03+ ATTCACCATTAAAATTGAGGTTTCTCATTAATCTTAAAAGCCTTTGTTTCTCTTCTACAG
JMFS013B01+ ATTCACCATTANAATTGAGGTTTCTCATTAATCTTAAAAGCCTTTGTTTCTCTTCTACAG
JMFF042H23+ TGAGGTTTCTCATTAATCTTAAAAGCCTTTG-TTCTCTTCTACAG
JMFS085E06+ TTCTCTTCTACAG
____________________________________________________________
consensus ATTCACCATTAAAATTGAGGTTTCTCATTAATCTTAAAAGCCTTTGTTTCTCTTCTACAG
. : . : . : . : . : . :
JMFS104G08+ ACTGTGCTCCATACCCCTGCATAAGGATGTTGGGAAGTAGGCGGTTATCGACACCAGTGG
JMSF025P03+ ACTGTGCTCCATACCCCTGCATAAGGATGTTGGGAAGTAGGCGGTTATCGACACCAGTGG
JMFS013B01+ ACTGTGCTCCATACCCCTGCATAAGGATGTTGGGAAGTAGGCGGTTATCGACACCAGTGG
JMFF042H23+ ACTGTGCTCCATACCCCTGCATAAGGATGTTGGGAAGTAGGCGGTTATCGACACCAGTGG
JMFS085E06+ ACTGTGCTCCATACCCCTGCATAAGGATGTTGGGAAGTAGGCGGTTATCGACACCAGTGG
____________________________________________________________
consensus ACTGTGCTCCATACCCCTGCATAAGGATGTTGGGAAGTAGGCGGTTATCGACACCAGTGG
. : . : . : . : . : . :
JMFS104G08+ AGGCCAAAGGAGAGGCCAGATGCTGCAACCCGGCAGACTGAAGCCAGCGCGCCATGACAG
JMSF025P03+ AGGCCAAAGGAGAGGCCAGATGCTGCAACCCGGCAGACTGAAGCCAGCGCGCCATGACAG
JMFS013B01+ AGGCCAAAGGAGAGGCCAGATGCTGCAACCCGGCAGACTGAAGCCAGCGCGCCATGACAG
JMFF042H23+ AGGCCAAAGGAGAGGCCAGATGCTGCAACCCGGCAGACTGAAGCCAGCGCGCCATGACAG
JMFS085E06+ AGGCCAAAGGAGAGGCCAGATGCTGCAACCCGGCAGACTGAAGCCAGCGCGCCATGACAG
____________________________________________________________
consensus AGGCCAAAGGAGAGGCCAGATGCTGCAACCCGGCAGACTGAAGCCAGCGCGCCATGACAG
. : . : . : . : . : . :
JMFS104G08+ CGTCTCCCGCATCGCCCGCGGGGCCGGCATTGCCTTGGTGATCATACAGAGCAGTCGCCG
JMSF025P03+ CGTCTCCCGCATCGCCCGCGGGGCCGGCATTGCCTTGGTGATCATACAGAGCAGTCGCCG
JMFS013B01+ CGTCTCCCGCATCGCCCGCGGGGCCGGCATTGCCTTGGTGATCATACAGAGCAGTCGCCG
JMFF042H23+ CGTCTCCCGCATCGCCCGCGGGGCCGGCATTGCCTTGGTGATCATACAGAGCAGTCGCCG
JMFS085E06+ CGTCTCCCGCATCGCCCGCGGGGCCGGCATTGCCTTGGTGATCATACAGAGCAGTCGCCG
____________________________________________________________
consensus CGTCTCCCGCATCGCCCGCGGGGCCGGCATTGCCTTGGTGATCATACAGAGCAGTCGCCG
. : . : . : . : . : . :
JMFS104G08+ CCGAATTGCTCTGCTGCATCTGGCCACCCATGTGGCGCTGCGACCGGCGTTGGGGAGCCA
JMSF025P03+ CCGAATTGCTCTGCTGCATCTGGCCACCCATGTGGCGCTGCGACCGGCGTTGGGGAGCCA
JMFS013B01+ CCGAATTGCTCTGCTGCATCTGGCCACCCATGTGGCGCTGCGACCGGCGTTGGGGAGCCA
JMFF042H23+ CGGAATTGCTCTGCTGCATCTGGCCACCCATGTGGCGCTGCGACCGGCGTTGGGGAGCCA
JMFS085E06+ CCGAATTGCTCTGCTGCATCTGGCCACCCATGTGGCGCTGCGACCGGCGTTGGGGAGCCA
____________________________________________________________
consensus CCGAATTGCTCTGCTGCATCTGGCCACCCATGTGGCGCTGCGACCGGCGTTGGGGAGCCA
. : . : . : . : . : . :
JMFS104G08+ ATTTCAAGATCTGTTATTCCAAGGGGGCGGCGAAAATCGAAATCAAATCCACGCATTCAC
JMSF025P03+ ATTTCAAGATCTGTTATTCCAAGGGGGCGGCGAAAATCGAAATCAAATCCACGCATTCAC
JMFS013B01+ ATTTCAAGATCTGTTATTCCAAGGGGGCGGCGAAAATCGAAATCAAATCCACGCATTCAC
JMFF004E24+ CAAATCCACGCATTCAC
JMFF042H23+ ATTTCAAGATCTGTTATTCCAAGGGGGCGGCGAAAATCGAAATCAAATCCACGCATTCAC
JMFS085E06+ ATTTCAAGATCTGTTATTCCAAGGGGGCGGCGAAAATCGAAATCAAATCCACGCATTCAC
____________________________________________________________
consensus ATTTCAAGATCTGTTATTCCAAGGGGGCGGCGAAAATCGAAATCAAATCCACGCATTCAC
. : . : . : . : . : . :
JMFS104G08+ GCGCGAATTCAATCCAACTCAATTGAATCCGGAAACCAATAAATCCCGATCGCAATCCCC
JMSF025P03+ GCGCGAATTCAATCCAACTCAATTGAATCCGGAAACCAATAAATCCCGATCGCAATCCCC
JMFS013B01+ GCGCGAATTCAATCCAACTCAATTGAATCCGGAAACCAATAAATCCCGATCGCAATCCCC
JMFF004E24+ GCGCGAATTCAATCCAACTCAATTGAATCCGGAAACCAATAAATCCCGATCGCAATCCCC
JMFF042H23+ GCGCGAATTCAATCCAACTCAATTGAATCCGGAAACCAATAAATCCCGATCGCAATCCCC
JMFS085E06+ GCGCGAATTCAATCCAACTCAATTGAATCCGGAAACCAATAAATCCCGATCGCAATCCCC
____________________________________________________________
consensus GCGCGAATTCAATCCAACTCAATTGAATCCGGAAACCAATAAATCCCGATCGCAATCCCC
. : . : . : . : . : . :
JMFS104G08+ GAAATGAACCGCAAAAACATCAAATATTCATTCAGAATTGAATTGAATCCAGTCTTCGGA
JMSF025P03+ GAAATGAACCGCAAAAACATCAAATATTCATTCAGAATTGAATTGAATCCAGTCTTCGGA
JMFS013B01+ GAAATGAACCGCAAAAACATCAAATATTCATTCAGAATTGAATTGAATCCAGTCTTCGGA
JMFF004E24+ GAAATGAACCGCAAAAACATCAAATATTCATTCAGAATTGAATTGAATCCAGTCTTCGGA
JMFF042H23+ GAAATGAACCGCAAAAACATCAAATATTCATTCAGAATTGAATTGAATCCAGTCTTCGGA
JMFS085E06+ GAAATGAACCGCAAAAACATCAAATATTCATTCAGAATTGAATTGAATCCAGTCTTCGGA
____________________________________________________________
consensus GAAATGAACCGCAAAAACATCAAATATTCATTCAGAATTGAATTGAATCCAGTCTTCGGA
. : . : . : . : . : . :
JMFS104G08+ GACAGATCAGACGGGTAAATGAGAAAGCAAAACCCTAATTTATTGAAAGAATTTCCCCCA
JMSF025P03+ GACAGATCAGACGGGTAAATGAGAAAGCAAAACCCTAATTTATTGAAAGAATTTCCCCCA
JMFS013B01+ GACAGATCAGACGGGTAAATGAGAAAGCAAAACCCTAATTTATTGAAAGAATTTCCCCCA
JMFF004E24+ GACAGATCAGACGGGTAAATGAGAAAGCAAAACCCTAATTTATTGAAAGAATTTCCCCCA
JMFF042H23+ GACAGATCAGACGGGTAAATGAGAAAGCAAAACCCTAATTTATTGAAAGAATTTCCCCCA
JMFS085E06+ GACAGATCAGACGGGTAAATGAGAAAGCAAAACCCTAATTTATTGAAAGAATTTCCCCCA
____________________________________________________________
consensus GACAGATCAGACGGGTAAATGAGAAAGCAAAACCCTAATTTATTGAAAGAATTTCCCCCA
. : . : . : . : . : . :
JMFS104G08+ AAAAACTGTT
JMSF025P03+ AAAAACTGTTAAAAACT
JMFS013B01+ AAAAACTGTTAAAAACTAATGGAATTGTTGTGGATGAGAAGATGAA
JMFF004E24+ AAAAACTGTTAAAAACTAATGGAATTGTTGTGGATGAGAAGATGAAGATAATGGAGGGAG
JMFF042H23+ AAAAACTGTTAAAAACTAATGGAATTGTTGTGGATGAGAAGATGAAGATAATGGAGGGAG
JMFS085E06+ AAAAACTGTTAAAAACTAATGGAATTGTTGTGGATGAGAAGATGAAGATAATGGAGGGAG
____________________________________________________________
consensus AAAAACTGTTAAAAACTAATGGAATTGTTGTGGATGAGAAGATGAAGATAATGGAGGGAG
. : . : . : . : . : . :
JMFF004E24+ TAATTTTAACCTTC
JMFF042H23+ TAATTTTAACCTTCTCCTGACAGAC
JMFS085E06+ TAATTTTAACCTTCTCCTGACAGACAAATTGTATCTGTATCTATAGGTGGTGAATACAAA
____________________________________________________________
consensus TAATTTTAACCTTCTCCTGACAGACAAATTGTATCTGTATCTATAGGTGGTGAATACAAA