Contig 009050:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005D11Sequence466009050 (8)ref|XP_009799456.1|1e-32PREDICTED: probable protein phosphatase 2C 5 [Nicotiana sylvestris]639005337 (4)ref|XP_009599009.1|5e-55PREDICTED: probable protein phosphatase 2C 5 [Nicotiana tomentosiformis]
JMFF012L10Sequence566009050 (8)ref|XP_009799456.1|1e-94PREDICTED: probable protein phosphatase 2C 5 [Nicotiana sylvestris]
JMFF016A15Sequence570009050 (8)ref|XP_009799456.1|2e-96PREDICTED: probable protein phosphatase 2C 5 [Nicotiana sylvestris]636005337 (4)ref|XP_009599009.1|3e-42PREDICTED: probable protein phosphatase 2C 5 [Nicotiana tomentosiformis]
JMFF037D15Sequence564009050 (8)ref|XP_009799456.1|7e-95PREDICTED: probable protein phosphatase 2C 5 [Nicotiana sylvestris]626005337 (4)ref|XP_009599009.1|9e-43PREDICTED: probable protein phosphatase 2C 5 [Nicotiana tomentosiformis]
JMFF039F14Sequence463009050 (8)ref|XP_009799456.1|5e-70PREDICTED: probable protein phosphatase 2C 5 [Nicotiana sylvestris]660005337 (4)ref|XP_009599009.1|3e-48PREDICTED: probable protein phosphatase 2C 5 [Nicotiana tomentosiformis]
JMFS020D03Sequence625009050 (8)ref|XP_009799456.1|2e-104PREDICTED: probable protein phosphatase 2C 5 [Nicotiana sylvestris]
JMFS068B04Sequence642009050 (8)ref|XP_009799456.1|1e-61PREDICTED: probable protein phosphatase 2C 5 [Nicotiana sylvestris]
JMSF012L09Sequence540009050 (8)ref|XP_009799456.1|2e-87PREDICTED: probable protein phosphatase 2C 5 [Nicotiana sylvestris]

Alignment

This contig is upended


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JMFS020D03+                                                              GCAGTGACA
                      ____________________________________________________________
consensus                                                                GCAGTGACA
 
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JMFS020D03+           CGCTCTCGTTCTTCCTCATTCTCTTCCAACCTATGGTCGACTGTCAACAGGGAAACAACC
                      ____________________________________________________________
consensus             CGCTCTCGTTCTTCCTCATTCTCTTCCAACCTATGGTCGACTGTCAACAGGGAAACAACC
 
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JMFS020D03+           CCTCCTTGTGTGTCCAGTATGCATCGAGAATCCCCAACAGATGCAACAGTCACAGTCCAT
JMFF037D15+                      GTCCAGTATGCATCGAGAATCCCCAACAGATGCAACAGTCACAGTCCAT
JMFF012L10+                      GTCCAGTATGCATCGAGAATCCCCAACAGATGCAACAGTCACAGTCCAT
JMFF016A15+                      GTCCAGTATGCATCGAGAATCCCCAACAGATGCAACAGTCACAGTCCAT
JMSF012L09+                                                 AGATGCAACAGTCACAGTCCAT
                      ____________________________________________________________
consensus             CCTCCTTGTGTGTCCAGTATGCATCGAGAATCCCCAACAGATGCAACAGTCACAGTCCAT
 
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JMFS020D03+           TCATCAATTACAACAAATGTTACAGTTGTACCTGATGTTTCACCTTTCTGCTGAAACTCT
JMFF037D15+           TCATCAATTACAACAAATGTTACAGTTGTACCTGATGTTTCACCTTTCTGCTGAAACTCT
JMFF012L10+           TCATCAATTACAACAAATGTTACAGTTGTACCTGATGTTTCACCTTTCTGCTGAAACTCT
JMFF039F14+                                                               GAAACTCT
JMFF016A15+           TCATCAATTACAACAAATGTTACAGTTGTACCTGATGTTTCACCTTTCTGCTGAAACTCT
JMSF012L09+           TCATCAATTACAACAAATGTTACAGTTGTACCTGATGTTTCACCTTTCTGCTGAAACTCT
                      ____________________________________________________________
consensus             TCATCAATTACAACAAATGTTACAGTTGTACCTGATGTTTCACCTTTCTGCTGAAACTCT
 
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JMFS020D03+           ATATCTGTTTTCACAAACCCAGCAACTAATGCTCTAGGAAGAGCTTGAAGCCACTCTTCC
JMFF037D15+           ATATCTGTTTTCACAAACCCAGCAACTAATGCTCTAGGAAGAGCTTGAAGCCACTCTTCC
JMFF012L10+           ATATCTGTTTTCACAAACCCAGCAACTAATGCTCTAGGAAGAGCTTGAAGCCACTCTTCC
JMFF039F14+           ATATCTGTTTTCACAAACCCAGCAACTAATGCTCTAGGAAGAGCTTGAAGCCACTCTTCC
JMFF016A15+           ATATCTGTTTTCACAAACCCAGCAACTAATGCTCTAGGAAGAGCTTGAAGCCACTCTTCC
JMSF012L09+           ATATCTGTTTTCACAAACCCAGCAACTAATGCTCTAGGAAGAGCTTGAAGCCACTCTTCC
JMFS068B04+                             CCAGCAACTAATGCTCTAGGAAGAGCTTGAAGCCACTCTTCC
                      ____________________________________________________________
consensus             ATATCTGTTTTCACAAACCCAGCAACTAATGCTCTAGGAAGAGCTTGAAGCCACTCTTCC
 
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JMFS020D03+           CTACCAAGTCCTTGGGGAATTGCACTCAAAACATTGTTCAGCAGATTCTCTTTTGCAAAT
JMFF037D15+           CTACCAAGTCCTTGGGGAATTGCACTCAAAACATTGTTCAGCAGATTCTCTTTTGCAAAT
JMFF012L10+           CTACCAAGTCCTTGGGGAATTGCACTCAAAACATTGTTCAGCAGATTCTCTTTTGCAAAT
JMFF039F14+           CTACCAAGTCCTTGGGGAATTGCACTCAAAACATTGTTCAGCAGATTCTCTTTTGCAAAT
JMFF016A15+           CTACCAAGTCCTTGGGGAATTGCACTCAAAACATTGTTCAGCAGATTCTCTTTTGCAAAT
JMSF012L09+           CTACCAAGTCCTTGGGGAATTGCACTCAAAACATTGTTCAGCAGATTCTCTTTTGCAAAT
JMFS068B04+           CTACCAAGTCCTTGGGGAATTGCACTCAAAACATTGTTCAGCAGATTCTCTTTTGCAAAT
                      ____________________________________________________________
consensus             CTACCAAGTCCTTGGGGAATTGCACTCAAAACATTGTTCAGCAGATTCTCTTTTGCAAAT
 
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JMFS020D03+           ATAGCAGCTGATATACCATTATGCCCATCAAAGATCGCAAAAACTGAAAATGAGGTCGTC
JMFF037D15+           ATAGCAGCTGATATACCATTATGCCCATCAAAGATCGCAAAAACTGAAAATGAGGTCGTC
JMFF012L10+           ATAGCAGCTGATATACCATTATGCCCATCAAAGATCGCAAAAACTGAAAATGAGGTCGTC
JMFF039F14+           ATAGCAGCTGATATACCATTATGCCCATCAAAGATCGCAAAAACTGAAAATGAGGTCGTC
JMFF016A15+           ATAGCAGCTGATATACCATTATGCCCATCAAAGATCGCAAAAACTGAAAATGAGGTCGTC
JMSF012L09+           ATAGCAGCTGATATACCATTATGCCCATCAAAGATCGCAAAAACTGAAAATGAGGTCGTC
JMFF005D11+                                   CCATCAAAGATCGCAAAAACTGAAAATGAGGTCGTC
JMFS068B04+           ATAGCAGCTGATATACCATTATGCCCATCAAAGATCGCAAAAACTGAAAATGAGGTCGTC
                      ____________________________________________________________
consensus             ATAGCAGCTGATATACCATTATGCCCATCAAAGATCGCAAAAACTGAAAATGAGGTCGTC
 
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JMFS020D03+           GAACTGCCTGAAATCCTCTGACAATCAGGCTTAATCAGAAAATAGTCCTCCCCTTTCTTA
JMFF037D15+           GAACTGCCTGAAATCCTCTGACAATCAGGCTTAATCAGAAAATAGTCCTCCCCTTTCTTA
JMFF012L10+           GAACTGCCTGAAATCCTCTGACAATCAGGCTTAATCAGAAAATAGTCCTCCCCTTTCTTA
JMFF039F14+           GAACTGCCTGAAATCCTCTGACAATCAGGCTTAATCAGAAAATAGTCCTCCCCTTTCTTA
JMFF016A15+           GAACTGCCTGAAATCCTCTGACAATCAGGCTTAATCAGAAAATAGTCCTCCCCTTTCTTA
JMSF012L09+           GAACTGCCTGAAATCCTCTGACAATCAGGCTTAATCAGAAAATAGTCCTCCCCTTTCTTA
JMFF005D11+           GAACTGCCTGAAATCCTCTGACAATCAGGCTTAATCAGAAAATAGTCCTCCCCTTTCTTA
JMFS068B04+           GAACTGCCTGAAATCCTCTGACAATCAGGCTTAATCAGAAAATAGTCCTCCCCTTTCTTA
                      ____________________________________________________________
consensus             GAACTGCCTGAAATCCTCTGACAATCAGGCTTAATCAGAAAATAGTCCTCCCCTTTCTTA
 
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JMFS020D03+           GCCAGAGCGGCTTGTCCATACTTCACAGTAGGTTTCTCCACCTTACTCTCATTCCGCAGC
JMFF037D15+           GCCAGAGCGGCTTGTCCATACTTCACAGTAGGTTTCTCCACCTTACTCTCATTCCGCAGC
JMFF012L10+           GCCAGAGCGGCTTGTCCATACTTCACAGTAGGTTTCTCCACCTTACTCTCATTCCGCAGC
JMFF039F14+           GCCAGAGCGGCTTGTCCATACTTCACAGTAGGTTTCTCCACCTTACTCTCATTCCGCAGC
JMFF016A15+           GCCAGAGCGGCTTGTCCATACTTCACAGTAGGTTTCTCCACCTTACTCTCATTCCGCAGC
JMSF012L09+           GCCAGAGCGGCTTGTCCATACTTCACAGTAGGTTTCTCCACCTTACTCTCATTCCGCAGC
JMFF005D11+           GCCAGAGCGGCTTGTCCATACTTCACAGTAGGTTTCTCCACCTTACTCTCATTCCGCAGC
JMFS068B04+           GCCAGAGCGGCTTGTCCATACTTCACAGTAGGTTTCTCCACCTTACTCTCATTCCGCAGC
                      ____________________________________________________________
consensus             GCCAGAGCGGCTTGTCCATACTTCACAGTAGGTTTCTCCACCTTACTCTCATTCCGCAGC
 
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JMFS020D03+           TCGCGGCCAATCAGAGTCCCCAGCGGCACAGCAACAGGCGTTGGCTTTTGCTTTGTCATC
JMFF037D15+           TCGCGGCCAATCAGAGTCCCCAGCGGCACAGCAACAGGCGTTGGCTTTTGCTTTGTCATC
JMFF012L10+           TCGCGGCCAATCAGAGTCCCCAGCGGCACAGCAACAGGCGTTGGCTTTTGCTTTGTCATC
JMFF039F14+           TCGCGGCCAATCAGAGTCCCCAGCGGCACAGCAACAGGCGTTGGCTTTTGCTTTGTCATC
JMFF016A15+           TCGCGGCCAATCAGAGTCCCCAGCGGCACAGCAACAGGCGTTGGCTTTTGCTTTGTCATC
JMSF012L09+           TCGCGGCCAATCAGAGTCCCCAGCGGCACAGCAACAGGCGTTGGCTTTTGCTTTGTCATC
JMFF005D11+           TCGCGGCCAATCAGAGTCCCCAGCGGCACAGCAACAGGCGTTGGCTTTTGCTTTGTCATC
JMFS068B04+           TCGCGGCCAATCAGAGTCCCCAGCGGCACAGCAACAGGCGTTGGCTTTTGCTTTGTCATC
                      ____________________________________________________________
consensus             TCGCGGCCAATCAGAGTCCCCAGCGGCACAGCAACAGGCGTTGGCTTTTGCTTTGTCATC
 
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JMFS020D03+           GTAACCTCCGCCTCGCTCATTTCTTCACTCTATGTTCCAACATTTTCCAAATCTTCACTT
JMFF037D15+           GTAACCTCCGCCTCGCTCATTTCTTCACTC--TGTTCCAACATTTTCCAAATCTTCACTT
JMFF012L10+           GTAACCTCCGCCTCGCTCATTTCTTCACTCTATGTTCCAACATTTTCCAAATCTTCACTT
JMFF039F14+           GTAACCTCCGCCTCGCTCATTTCTTCACTC--TGTTCCAACATTTTCCAAATCTTCACTT
JMFF016A15+           GTAACCTCCGCCTCGCTCATTTCTTCACTC--TGTTCCAACATTTTCCAAATCTTCACTT
JMSF012L09+           GTAACCTCCGCCTCGCTCATTTCTTCACTCTATGTTCCAACATTTTCCAAATCTTCACTT
JMFF005D11+           GTAACCTCCGCCTCGCTCATTTCTTCACTCTATGTTCCAACATTTTCCAAATCTTCACTT
JMFS068B04+           GTAACCTCCGCCTCGCTCATTTCTTCACTCTATGTTCCAACATTTTCCAAATCTTCACTT
                      ____________________________________________________________
consensus             GTAACCTCCGCCTCGCTCATTTCTTCACTCTATGTTCCAACATTTTCCAAATCTTCACTT
 
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JMFS020D03+           CAACCAATGAAGACAA                                            
JMFF037D15+           CAACCAATGAAGACAAGGAAAGGAATCAAGAGGAGCT                       
JMFF012L10+           CAACCAATGAAGACAAGGAAAGGAATCAAGAGGA                          
JMFF039F14+           CAACCAATGAAGACAAGGAAAGGAATCAAGAGGA                          
JMFF016A15+           CAACCAATGAAGACAAGGAAAGGAATCAAGAGGAGCT                       
JMSF012L09+           CAACCAATGAAGACAAGGAAAGGAATCAAGAGGAGCT                       
JMFF005D11+           CAACCAATGAAGACAAGGAAAGGAATCAAGAGGAGCTAAGCATTGTACAGAAGGGAAGCA
JMFS068B04+           CAACCAATGAAGACAAGGAAAGGAATCAAGAGGAGCTAAGCATTGTACAGAAGGGAAGCA
                      ____________________________________________________________
consensus             CAACCAATGAAGACAAGGAAAGGAATCAAGAGGAGCTAAGCATTGTACAGAAGGGAAGCA
 
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JMFF005D11+           TATAGATATAGGAGTGTATGTATAGGAGAGTGGGGGGATTTGGTTCAGGTGTGAGCTGGA
JMFS068B04+           TATAGATATAGGAGTGTATGTATAGGAGAGTGGGGGGATTTGGTTCAGGTGTGAGCTGGA
                      ____________________________________________________________
consensus             TATAGATATAGGAGTGTATGTATAGGAGAGTGGGGGGATTTGGTTCAGGTGTGAGCTGGA
 
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JMFF005D11+           ATGGATCGGAATGTTGACAGTGAAACCCTAGAGAGATAAAGACTGGGAGAGAGATATCTG
JMFS068B04+           ATGGATCGGAATGTTGACAGTGAAACCCTAGAGAGATAAAGACTGGGAGAGAGATATCTG
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consensus             ATGGATCGGAATGTTGACAGTGAAACCCTAGAGAGATAAAGACTGGGAGAGAGATATCTG
 
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JMFF005D11+           TCGTTTGATT                                                  
JMFS068B04+           TCGTTTGATTGGATGAAAATAAAAGAAATGAAATTTCTAGAGAGAGAAAAACAAGGGTGG
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consensus             TCGTTTGATTGGATGAAAATAAAAGAAATGAAATTTCTAGAGAGAGAAAAACAAGGGTGG