Contig 009042:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS017D07Sequence638009042 (3)emb|CDP08664.1|5e-67unnamed protein product [Coffea canephora]
JMFS059E06Sequence627009042 (3)emb|CDP08664.1|5e-61unnamed protein product [Coffea canephora]
JMFS123F06Sequence576009042 (3)emb|CDP08664.1|3e-61unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMFS123F06+                                            GGGAAATCATGCTTCCCAATCACCGTC
JMFS017D07+                  CCGGCAACAAGGCAGGCCACGCTTTGGGGAAATCATGCTTCCCAATCACCGTC
JMFS059E06+                                            GGGAAATCATGCTTCCCAATCACCGTC
                      ____________________________________________________________
consensus                    CCGGCAACAAGGCAGGCCACGCTTTGGGGAAATCATGCTTCCCAATCACCGTC
 
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JMFS123F06+           AAGGCTTCACTGAGCTGAGATTGTATTTTGGGAGACGAATTGATCATCAAGGAAACAATC
JMFS017D07+           AAGGCTTCACTGAGCTGAGATTGTATTTTGGGAGACGAATTGATCATCAAGGAAACAATC
JMFS059E06+           AAGGCTTCACTGAGCTGAGATTGTATTTTGGGAGACGAATTGATCATCAAGGAAACAATC
                      ____________________________________________________________
consensus             AAGGCTTCACTGAGCTGAGATTGTATTTTGGGAGACGAATTGATCATCAAGGAAACAATC
 
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JMFS123F06+           AAACTCTTAATTTGCTCCTTCTCAAAGTCCGGAATCGGAGTTAGGGTAGGAACATTGGGG
JMFS017D07+           AAACTCTTAATTTGCTCCTTCTCAAAGTCCGGAATCGGAGTTAGGGTAGGAACATTGGGG
JMFS059E06+           AAACTCTTAATTTGCTCCTTCTCAAAGTCCGGAATCGGAGTTAGGGTAGGAACATTGGGG
                      ____________________________________________________________
consensus             AAACTCTTAATTTGCTCCTTCTCAAAGTCCGGAATCGGAGTTAGGGTAGGAACATTGGGG
 
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JMFS123F06+           TCGGAAGGCGTAGACGGCGACCACCGCGACTTGAGCTGGTTCTTGAAGTTCACAGAAGCA
JMFS017D07+           TCGGAAGGCGTAGACGGCGACCACCGCGACTTGAGCTGGTTCTTGAAGTTCACAGAAGCA
JMFS059E06+           TCGGAAGGCGTAGACGGCGACCACCGCGACTTGAGCTGGTTCTTGAAGTTCACAGAAGCA
                      ____________________________________________________________
consensus             TCGGAAGGCGTAGACGGCGACCACCGCGACTTGAGCTGGTTCTTGAAGTTCACAGAAGCA
 
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JMFS123F06+           GCTTGGCGGATCTGTTCATCAACGGAAGGCTCGGCAACGAGGCGGAGCACGGCGAGCGCA
JMFS017D07+           GCTTGGCGGATCTGTTCATCAACGGAAGGCTCGGCAACGAGGCGGAGCACGGCGAGCGCA
JMFS059E06+           GCTTGGCGGATCTGTTCATCAACGGAAGGCTCGGCAACGAGGCGGAGCACGGCGAGCGCA
                      ____________________________________________________________
consensus             GCTTGGCGGATCTGTTCATCAACGGAAGGCTCGGCAACGAGGCGGAGCACGGCGAGCGCA
 
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JMFS123F06+           TAATTAGGTTTCTCAGAGGCATCAGCCAGGGCCGACTCGGCTTGGCGGCGAGGCTGGGGC
JMFS017D07+           TAATTAGGTTTCTCAGAGGCATCAGCCAGGGCCGACTCGGCTTGGCGGCGAGGCTGGGGC
JMFS059E06+           TAATTAGGTTTCTCAGAGGCATCAGCCAGGGCCGACTCGGCTTGGCGGCGAGGCTGGGGC
                      ____________________________________________________________
consensus             TAATTAGGTTTCTCAGAGGCATCAGCCAGGGCCGACTCGGCTTGGCGGCGAGGCTGGGGC
 
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JMFS123F06+           ATCGGAGAAAGAGTATTGAGGAAGCATTGGGAAAGGAATTGTAGAGTTTCGGCATTCCAC
JMFS017D07+           ATCGGAGAAAGAGTATTGAGGAAGCATTGGGAAAGGAATTGTAGAGTTTCGGCATTCCAC
JMFS059E06+           ATCGGAGAAAGAGTATTGAGGAAGCATTGGGAAAGGAATTGTAGAGTTTCGGCATTCCAC
                      ____________________________________________________________
consensus             ATCGGAGAAAGAGTATTGAGGAAGCATTGGGAAAGGAATTGTAGAGTTTCGGCATTCCAC
 
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JMFS123F06+           TCCATTTTTTTAGAAGCTTAGAACGAAGTGCAACTAGGGTTTAACGAGATTTTTGAAATG
JMFS017D07+           TCCATTTTTTTAGAAGCTTAGAACGAAGTGCAACTAGGGTTTAACGAGATTTTTGAAATG
JMFS059E06+           TCCATTTTTTTAGAAGCTTAGAACGAAGTGCAACTAGGGTTTAACGAGATTTTTGAAATG
                      ____________________________________________________________
consensus             TCCATTTTTTTAGAAGCTTAGAACGAAGTGCAACTAGGGTTTAACGAGATTTTTGAAATG
 
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JMFS123F06+           TGAACTGAAATCTATACAGACATAAGATTATAATAGGTATAGGATATGGCTTCAGAGAAT
JMFS017D07+           TGAACTGAAATCTATACAGACATAAGATTATAATAGGTATAGGATATGGCTTCAGAGAAT
JMFS059E06+           TGAACTGAAATCTATACAGACATAAGATTATAATAGGTATAGGATATGGCTTCAGAGAAT
                      ____________________________________________________________
consensus             TGAACTGAAATCTATACAGACATAAGATTATAATAGGTATAGGATATGGCTTCAGAGAAT
 
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JMFS123F06+           GAAGAAATGTAGTAGAGAGAAACAGAATACCTTTCGGCGATCGATAGGCGGAGAGAGAGA
JMFS017D07+           GAAGAAATGTAGTAGAGAGAAACAGAATACCTTTCGGCGATCGATAGGCGGAGAGAGAGA
JMFS059E06+           GAAGAAATGTAGTAGAGAGAAACAGAATACCTTTCGGCGATCGATAGGCGGAGAGAGAGA
                      ____________________________________________________________
consensus             GAAGAAATGTAGTAGAGAGAAACAGAATACCTTTCGGCGATCGATAGGCGGAGAGAGAGA
 
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JMFS123F06+           GAGGAAGGG                                                   
JMFS017D07+           GAGGAAGGGCGTGGCCGCGTGGGGACTGTGCTATAGAGTTTGAAC               
JMFS059E06+           GAGGAAGGGCGTGGCCGCGTGGGGACTGTGCTATAGAGTTTGAACAAGATGAGGGAGGGA
                      ____________________________________________________________
consensus             GAGGAAGGGCGTGGCCGCGTGGGGACTGTGCTATAGAGTTTGAACAAGATGAGGGAGGGA