Contig 009035:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS055E01+                                    CCGTTCCAAATAGGCTTGAAGCATGAGGGCTTTCC
                      ____________________________________________________________
consensus                                      CCGTTCCAAATAGGCTTGAAGCATGAGGGCTTTCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS055E01+           TGTAGTACATCATTCCACGCACAGTTCTAGCTAATGTTTGTCCTCTGTATGAAGCCCAAA
                      ____________________________________________________________
consensus             TGTAGTACATCATTCCACGCACAGTTCTAGCTAATGTTTGTCCTCTGTATGAAGCCCAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS055E01+           AACGCAGTTCAAGAATATCACTATTACTAAGTTCTGATTCTGATATGTTTTCATCACGGC
                      ____________________________________________________________
consensus             AACGCAGTTCAAGAATATCACTATTACTAAGTTCTGATTCTGATATGTTTTCATCACGGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS055E01+           CAATCCGAGTAAGAAAGTTCCTCCACTCGTCTGGATAGATCTTTTGGAGGTAAAATAAAG
JMFS068G11+                                            GATAGATCTTTTGGAGGTAAAATAAAG
                      ____________________________________________________________
consensus             CAATCCGAGTAAGAAAGTTCCTCCACTCGTCTGGATAGATCTTTTGGAGGTAAAATAAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS055E01+           TTGAGATCCCATCTTCATTTTTTTTAAGGAGTTCAGACATACTGTACAAGACAGTCTCAG
JMFS068G11+           TTGAGATCCCATCTTCATTTTTTTTAAGGAGTTCAGACATACTGTACAAGACAGTCTCAG
                      ____________________________________________________________
consensus             TTGAGATCCCATCTTCATTTTTTTTAAGGAGTTCAGACATACTGTACAAGACAGTCTCAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS055E01+           AGTAATATGGGGTGAAGACACTAAAGGACAACATCTCACGGACAGGTTTTGCCACTGGCA
JMFS068G11+           AGTAATATGGGGTGAAGACACTAAAGGACAACATCTCACGGACAGGTTTTGCCACTGGCA
                      ____________________________________________________________
consensus             AGTAATATGGGGTGAAGACACTAAAGGACAACATCTCACGGACAGGTTTTGCCACTGGCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS055E01+           TCTCCATAAAAAGTGAATTTGTGAAGAAATCTAGCCGGCGTTGAGCCTCAAGATTCTTAG
JMFS068G11+           TCTCCATAAAAAGTGAATTTGTGAAGAAATCTAGCCGGCGTTGAGCCTCAAGATTCTTAG
JMFS049G04+                                           AGCCGGCGTTGAGCCTCAAGATTCTTAG
                      ____________________________________________________________
consensus             TCTCCATAAAAAGTGAATTTGTGAAGAAATCTAGCCGGCGTTGAGCCTCAAGATTCTTAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS055E01+           GGATATTGGCAGCAGAGTCCTTGATAGTGAGAAGTGAATACAGTCTTCTGACTTGAGCCC
JMFS068G11+           GGATATTGGCAGCAGAGTCCTTGATAGTGAGAAGTGAATACAGTCTTCTGACTTGAGCCC
JMFS049G04+           GGATATTGGCAGCAGAGTCCTTGATAGTGAGAAGTGAATACAGTCTTCTGACTTGAGCCC
                      ____________________________________________________________
consensus             GGATATTGGCAGCAGAGTCCTTGATAGTGAGAAGTGAATACAGTCTTCTGACTTGAGCCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS055E01+           TCAATTCAACATCTGTTGGCCACTTCAACTTCTGAAACAAGCGACCTTCATTCCTAGCTT
JMFS068G11+           TCAATTCAACATCTGTTGGCCACTTCAACTTCTGAAACAAGCGACCTTCATTCCTAGCTT
JMFS049G04+           TCAATTCAACATCTGTTGGCCACTTCAACTTCTGAAACAAGCGACCTTCATTCCTAGCTT
JMFS054G01+                                                                   GCTT
                      ____________________________________________________________
consensus             TCAATTCAACATCTGTTGGCCACTTCAACTTCTGAAACAAGCGACCTTCATTCCTAGCTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS055E01+           TTGACAAGTCATTCCATATTTCCATGTGTTCCCTCATGTTAACATGAAGGACATCAAATC
JMFS068G11+           TTGACAAGTCATTCCATATTTCCATGTGTTCCCTCATGTTAACATGAAGGACATCAAATC
JMFS049G04+           TTGACAAGTCATTCCATATTTCCATGTGTTCCCTCATGTTAACATGAAGGACATCAAATC
JMFS054G01+           TTGACAAGTCATTCCATATTTCCATGTGTTCCCTCATGTTAACATGAAGGACATCAAATC
                      ____________________________________________________________
consensus             TTGACAAGTCATTCCATATTTCCATGTGTTCCCTCATGTTAACATGAAGGACATCAAATC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS055E01+           GCATAACATCGTATAGATCTTGCAGAGCATTAACAGCACCACTTTCTTGTT         
JMFS068G11+           GCATAACATCGTATAGATCTTGCAGAGCATTAACAGCACCACTTTCTTGTTTCTGAGAAT
JMFS049G04+           GCATAACATCGTATAGATCTTGCAGAGCATTAACAGCACCACTTTCTTGTTTCTGAGAAT
JMFS054G01+           GCATAACATCGTATAGATCTTGCAGAGCATTAACAGCACCACTTTCTTGTTTCTGAGAAT
                      ____________________________________________________________
consensus             GCATAACATCGTATAGATCTTGCAGAGCATTAACAGCACCACTTTCTTGTTTCTGAGAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS068G11+           GTTCTTCCTTCAGTATTCCTAAAAGTGCGGTAACTTTCTGAATCATTAGTGGTAGCTTAT
JMFS049G04+           GTTCTTCCTTCAGTATTCCTAAAAGTGCGGTAACTTTCTGAATCATTAGTGGTAGCTTAT
JMFS054G01+           GTTCTTCCTTCAGTATTCCTAAAAGTGCGGTAACTTTCTGAATCATTAGTGGTAGCTTAT
                      ____________________________________________________________
consensus             GTTCTTCCTTCAGTATTCCTAAAAGTGCGGTAACTTTCTGAATCATTAGTGGTAGCTTAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS068G11+           TCAATTCAATAGTATCAAATATGCTCCTCTTCTCTATGCTTTCATGAATCTCCTCATAGA
JMFS049G04+           TCAATTCAATAGTATCAAATATGCTCCTCTTCTCTATGCTTTCATGAATCTCCTCATAGA
JMFS054G01+           TCAATTCAATAGTATCAAATATGCTCCTCTTCTCTATGCTTTCATGAATCTCCTCATAGA
                      ____________________________________________________________
consensus             TCAATTCAATAGTATCAAATATGCTCCTCTTCTCTATGCTTTCATGAATCTCCTCATAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS068G11+           TTCTCTGAACCCACTTCTTACCCTCGTCATCTAATACAGATGTGA               
JMFS049G04+           TTCTCTGAACCCACTTCTTACCCTCGTCATCTAATACAGATGTGAGGATTAACTGAATGG
JMFS054G01+           TTCTCTGAACCCACTTCTTACCCTCGTCATCTAATACAGATGTGAGGATTAACTGAATGG
                      ____________________________________________________________
consensus             TTCTCTGAACCCACTTCTTACCCTCGTCATCTAATACAGATGTGAGGATTAACTGAATGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS049G04+           TAGAAAAGCACTCTTCAACTGCATACTTCATGTAATCATCCCTTGAAATCCTATCCCATA
JMFS054G01+           TAGAAAAGCACTCTTCAACTGCATACTTCATGTAATCATCCCTTGAAATCCTATCCCATA
                      ____________________________________________________________
consensus             TAGAAAAGCACTCTTCAACTGCATACTTCATGTAATCATCCCTTGAAATCCTATCCCATA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS049G04+           GCTCTTCTTGCGATAGCCTGGACTCTCTACTCTCAACAGCAGTATCTTTTGCAATAAATA
JMFS054G01+           GCTCTTCTTGCGATAGCCTGGACTCTTTACTCTCAACAGCAGTATCTTTTGCAATAAATA
                      ____________________________________________________________
consensus             GCTCTTCTTGCGATAGCCTGGACTCTTTACTCTCAACAGCAGTATCTTTTGCAATAAATA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS049G04+           TCTTGCTAGCGAGGAGGAACAGGGGCCATT                              
JMFS054G01+           TCTTGCTAGCGAGGAGGAACAGGGGCCATTGAACTAAGGAGAGATTCCCAGAATTTTTAG
                      ____________________________________________________________
consensus             TCTTGCTAGCGAGGAGGAACAGGGGCCATTGAACTAAGGAGAGATTCCCAGAATTTTTAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS054G01+           GCATCAGAAGCAATTCCATTTTTAAACTATTAATGTAGTCTTCCTCCCNCAAATTCANAN
                      ____________________________________________________________
consensus             GCATCAGAAGCAATTCCATTTTTAAACTATTAATGTAGTCTTCCTCCCNCAAATTCANAN
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS054G01+           TATTTCATTCCAGAAAGGAGCAAACCGGGCAGCATCAAATTTGTTAACCAAACCCCGCAG
                      ____________________________________________________________
consensus             TATTTCATTCCAGAAAGGAGCAAACCGGGCAGCATCAAATTTGTTAACCAAACCCCGCAG