Contig 009033:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF022F02Sequence555010921 (5)ref|XP_002302482.2|2e-70hypothetical protein POPTR_0002s13620g [Populus trichocarpa] gb|EEE81755.2| hypo751009033 (3)ref|XP_006354632.1|1e-97PREDICTED: dynamin-related protein 1E-like [Solanum tuberosum]
JMFN015M15Sequence491009033 (3)ref|XP_006354626.1|8e-39PREDICTED: dynamin-related protein 1E-like [Solanum tuberosum]
JMFS053G10Sequence599009033 (3)ref|XP_006354632.1|1e-122PREDICTED: dynamin-related protein 1E-like [Solanum tuberosum]

Alignment

This contig is upended


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JMFN015M15+                   ACCATTCTATTTATAGCCAAATAACTCATTGAACAAAGCATCAGGAGTGCTG
                      ____________________________________________________________
consensus                     ACCATTCTATTTATAGCCAAATAACTCATTGAACAAAGCATCAGGAGTGCTG
 
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JMFN015M15+           TCAAAACTAAGGACAAATGTATCAGTTGTCTGTCAGCATCTAAACGGGAGTAACACTACA
                      ____________________________________________________________
consensus             TCAAAACTAAGGACAAATGTATCAGTTGTCTGTCAGCATCTAAACGGGAGTAACACTACA
 
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JMFN015M15+           CACCAAACAAAGTAATTACAACGCAGAACAAGTGAGATTCAGCAACAATCTGGATTCATG
                      ____________________________________________________________
consensus             CACCAAACAAAGTAATTACAACGCAGAACAAGTGAGATTCAGCAACAATCTGGATTCATG
 
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JMFN015M15+           CAGATCACGAACTGAAATATCATACCGGCATCTACAACGTTCACTAATATCATCGAGCCC
rJMFF022F02-                                                    ACTAATATCATCGAGCCC
                      ____________________________________________________________
consensus             CAGATCACGAACTGAAATATCATACCGGCATCTACAACGTTCACTAATATCATCGAGCCC
 
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JMFN015M15+           ATGATACAGAGTCAATCTCATCCCTTGCTTTCTTGTACAGTTCAAGCCTCTTGGCACACT
rJMFF022F02-          ATGATACAGAGTCAATCTCATCCCTTGCTTTCTTGTACAGTTCAAGCCGCTTGGCACACT
                      ____________________________________________________________
consensus             ATGATACAGAGTCAATCTCATCCCTTGCTTTCTTGTACAGTTCAAGCCTCTTGGCACACT
 
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JMFN015M15+           GCTGTCTCCTCTCCATCAATGCTGGATCTTCATCTAGCAACTCTGCAAGTGCCTTACCCT
rJMFF022F02-          GCTGTCTCCTCTCCATCAATGCTGGATCTTCATCTAGCAACTCTGCAAGTGCCTTACCCT
                      ____________________________________________________________
consensus             GCTGTCTCCTCTCCATCAATGCTGGATCTTCATCTAGCAACTCTGCAAGTGCCTTACCCT
 
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JMFN015M15+           CTTTCCCCCCAATACGTGTGTAGAAGTGATTCAGTAAAGACTGTTTGGCCTCCTTCACTT
rJMFF022F02-          CTTTCCCCCCAATACGTGTGTAGAAGTGATTCAGTAAAGACTGTTTGGCCTCCTTCACTT
                      ____________________________________________________________
consensus             CTTTCCCCCCAATACGTGTGTAGAAGTGATTCAGTAAAGACTGTTTGGCCTCCTTCACTT
 
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JMFN015M15+           GACAGTGAACCACTGCTTTGGGAATAGTGTTCCTGAGAGTGTCTGATACCATATTGACAT
rJMFF022F02-          GACAGTGAACCACTGCTTTGGGAATAGTGTTCCTGAGAGTGTCTGATACCATATTGACAT
                      ____________________________________________________________
consensus             GACAGTGAACCACTGCTTTGGGAATAGTGTTCCTGAGAGTGTCTGATACCATATTGACAT
 
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JMFN015M15+           AAGATGATACATTTGACCC                                         
rJMFF022F02-          AAGATGATACATTTGACCCTATCCTCCTAAAGTGACCTTCTGAATAATTGTCCACTGTTG
                      ____________________________________________________________
consensus             AAGATGATACATTTGACCCTATCCTCCTAAAGTGACCTTCTGAATAATTGTCCACTGTTG
 
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rJMFF022F02-          TAGTTGCAGCTGCTTTTCCCCCTTTCTCCACTTCCTGGGGAAGTTTCCTGAAGAAATCAG
JMFS053G10+                         TTTCCCCCTTTCTCCACTTCCTGGGGAAGTTTCCTGAAGAAATCAG
                      ____________________________________________________________
consensus             TAGTTGCAGCTGCTTTTCCCCCTTTCTCCACTTCCTGGGGAAGTTTCCTGAAGAAATCAG
 
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rJMFF022F02-          CTGTCAGGTAGGCAGCTTCCATGTCAACAAGTCTAACTACTGTCTTCTTACTTTCCTCAC
JMFS053G10+           CTGTCAGGTAGGCAGCTTCCATGTCAACAAGTCTAACTACTGTCTTCTTACTTTCCTCAC
                      ____________________________________________________________
consensus             CTGTCAGGTAGGCAGCTTCCATGTCAACAAGTCTAACTACTGTCTTCTTACTTTCCTCAC
 
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rJMFF022F02-          GGAACTTTTCCAAGGCTTGATTGGAAGCTGCAGCTATTGCAGTTTGCAAACTAGGAAACC
JMFS053G10+           GGAACTTTTCCAAGGCTTGATTGGAAGCTGCAGCTATTGCAGTTTGCAAACTAGGAAACC
                      ____________________________________________________________
consensus             GGAACTTTTCCAAGGCTTGATTGGAAGCTGCAGCTATTGCAGTTTGCAAACTAGGAAACC
 
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rJMFF022F02-          GCTTCAACTCCTGACATTCCCCAATTGACTTCCTCACAAGTTCCTTCAGAACAAAGTGAA
JMFS053G10+           GCTTCAACTCCTGACATTCCCCAATTGACTTCCTCACAAGTTCCTTCAGAACAAAGTGAA
                      ____________________________________________________________
consensus             GCTTCAACTCCTGACATTCCCCAATTGACTTCCTCACAAGTTCCTTCAGAACAAAGTGAA
 
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rJMFF022F02-          CAGCATCTACTGAAG                                             
JMFS053G10+           CAGCATCTACTGAAGCTTCAGCTGGGCCTCTAAAATAATTCAAAGCTCCCTCAATAAGCC
                      ____________________________________________________________
consensus             CAGCATCTACTGAAGCTTCAGCTGGGCCTCTAAAATAATTCAAAGCTCCCTCAATAAGCC
 
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JMFS053G10+           GTCTATAACCTTGCTCGGGGGCAATCAAGTGAGGTTGGTAACCATCTGCCTCTGAAACAA
                      ____________________________________________________________
consensus             GTCTATAACCTTGCTCGGGGGCAATCAAGTGAGGTTGGTAACCATCTGCCTCTGAAACAA
 
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JMFS053G10+           CTTTCCTCACATTTTGAATAGATAGATGGCGATCGAATGGAAGTTTTCTCAAAGCTGCAG
                      ____________________________________________________________
consensus             CTTTCCTCACATTTTGAATAGATAGATGGCGATCGAATGGAAGTTTTCTCAAAGCTGCAG
 
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JMFS053G10+           GAAGCTGATTGTCAAAAACCCCATAGATTCTATCACCACCTGGCCGGCCTCCATCGAGAT
                      ____________________________________________________________
consensus             GAAGCTGATTGTCAAAAACCCCATAGATTCTATCACCACCTGGCCGGCCTCCATCGAGAT
 
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JMFS053G10+           GCTCCTTAAATATCTTGAAAAAGGCACGGCATAGTTCCAATATAGTGTAGAGTTGAGCCC
                      ____________________________________________________________
consensus             GCTCCTTAAATATCTTGAAAAAGGCACGGCATAGTTCCAATATAGTGTAGAGTTGAGCCC