| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS053A09 | Sequence | 504 | 009032 (7) | ||||||||
| JMFS093F11 | Sequence | 603 | 009032 (7) | ref|XP_006378562.1| | 3e-39 | hypothetical protein POPTR_0010s16340g [Populus trichocarpa] gb|ERP56359.1| hypo | |||||
| JMSF003J23 | Sequence | 261 | 009032 (7) | 787 | 009931 (6) | emb|CDP15192.1| | 1e-104 | unnamed protein product [Coffea canephora] | |||
| JMSF015B21 | Sequence | 478 | 009032 (7) | 790 | 009931 (6) | emb|CDP15192.1| | 2e-112 | unnamed protein product [Coffea canephora] | |||
| JMSF015I04 | Sequence | 194 | 009032 (7) | 757 | 009931 (6) | ref|XP_009765624.1| | 1e-106 | PREDICTED: pleiotropic drug resistance protein 3 [Nicotiana sylvestris] | |||
| JMSF021E18 | Sequence | 664 | 009032 (7) | ref|XP_010313828.1| | 1e-45 | PREDICTED: pleiotropic drug resistance protein 3 isoform X2 [Solanum lycopersic | 775 | 009931 (6) | ref|XP_006358552.1| | 2e-106 | PREDICTED: pleiotropic drug resistance protein 3-like [Solanum tuberosum] |
| JMSF038J15 | Sequence | 445 | 009032 (7) | 896 | 009931 (6) | ref|XP_009765624.1| | 2e-112 | PREDICTED: pleiotropic drug resistance protein 3 [Nicotiana sylvestris] | |||
This contig is upended
. : . : . : . : . : . :
JMSF021E18+ ATCTTAAGGATGTAATCTGTCTG
____________________________________________________________
consensus ATCTTAAGGATGTAATCTGTCTG
. : . : . : . : . : . :
JMFS093F11+ TCTTTTGTCCTTCCACAGATATTGCCTTCATGTAAATATCTATGTCCTGATC
JMSF021E18+ AAGATTTGTCTTTTGTCCTTCCACAGATATTGCCTTCATGTAAATATCTATGTCCTGATC
____________________________________________________________
consensus AAGATTTGTCTTTTGTCCTTCCACAGATATTGCCTTCATGTAAATATCTATGTCCTGATC
. : . : . : . : . : . :
JMFS093F11+ AGGAACAATTCCTAATTCCTTCTCCATCTTGATTAGCTCAACCAAAATATCAGCTCTGCT
JMSF021E18+ AGGAACAATTCCTAATTCCTTCTCCATCTTGATTAGCTCAACCAAAATATCAGCTCTGCT
____________________________________________________________
consensus AGGAACAATTCCTAATTCCTTCTCCATCTTGATTAGCTCAACCAAAATATCAGCTCTGCT
. : . : . : . : . : . :
JMFS093F11+ ACCCACGCCCTGGCAGCAAGATGAGAAATCAAGGGTTTCTCTGACAGTCATTTCAGGGAT
JMSF021E18+ ACCCACGCCCTGGCAGCAAGATGAGAAATCAAGGGTTTCTCTGACAGTCATTTCAGGGAT
____________________________________________________________
consensus ACCCACGCCCTGGCAGCAAGATGAGAAATCAAGGGTTTCTCTGACAGTCATTTCAGGGAT
. : . : . : . : . : . :
JMFS093F11+ ATGTAAGTCGTATTGACTAATGTATGCAGAAGTTTTCTGGGGGACAAATTCTTGAAATTT
JMSF021E18+ ATGTAAGTCGTATTGACTAATGTATGCAGAAGTTTTCTGGGGGACAAATTCTTGAAATTT
____________________________________________________________
consensus ATGTAAGTCGTATTGACTAATGTATGCAGAAGTTTTCTGGGGGACAAATTCTTGAAATTT
. : . : . : . : . : . :
JMFS093F11+ GTGCCCATTGTAAGAAATTTCTCCCCTAACCTCAATTAAGCTGATAAGTCGATGAACATT
JMSF015B21+ ACCTCAATTAAGCTGATAAGTCGATGAACATT
JMSF038J15+ ACCTCAATTAAGCTGATAAGTCGATGAACATT
JMSF021E18+ GTGCCCATTGTAAGAAATTTCTCCCCTAACCTCAATTAAGCTGATAAGTCGATGAACATT
JMFS053A09+ ACCTCAATTAAGCTGATAAGTCGATGAACATT
____________________________________________________________
consensus GTGCCCATTGTAAGAAATTTCTCCCCTAACCTCAATTAAGCTGATAAGTCGATGAACATT
. : . : . : . : . : . :
JMFS093F11+ AACCATTTAACCACAATTTTATCCAAACCCCACATCCCGGTAAACCCTGGTATGAGTCTG
JMSF015B21+ AACCATTTAACCACAATTTTATCCAAACCCCACATCCCGGTAAACCCTGGTATGAGTCTG
JMSF038J15+ AACCATTTAACCACAATTTTATCCAAACCCCACATCCCGGTAAACCCTGGTATGAGTCTG
JMSF021E18+ AACCATTTAACCACAATTTTATCCAAACCCCACATCCCGGTAAACCCTGGTATGAGTCTG
JMFS053A09+ ATCCATTTATCCACAATTTTATCCAAACCCCACATCCCGGTAAACCCTGGTATGAGTCTG
____________________________________________________________
consensus AACCATTTAACCACAATTTTATCCAAACCCCACATCCCGGTAAACCCTGGTATGAGTCTG
. : . : . : . : . : . :
JMFS093F11+ CTCTATCTTGGAGTTTGATTCCTGCAACTGTTCTTCGTAGCATAGGGGCGAGTGGAAAGA
JMSF015B21+ CTCTATCTTGGAGTTTGATTCCTGCAACTGTTCTTCGTAGCATAGGGGCGAGTGGAAAGA
JMSF038J15+ CTCTATCTCGGAGTTTGATTCCTGCAACTGTTCTTCGTAGCATAGGGGCGAGTGGAAAGA
JMSF003J23+ CCTGCAACTGTTCTTCGTAGCATAGGGGCGAGTGGAAAGA
JMSF021E18+ CTCTATCTTGGAGTTTGATTCCTGCAACTGTTCTTCGTAGCATAGGGGCGAGTGGAAAGA
JMFS053A09+ CTCTATCTTGGAGTTTGATTCCTGCAACTGTTCTTCGTAGCATAGGGGTGAGTGGAAAGA
____________________________________________________________
consensus CTCTATCTTGGAGTTTGATTCCTGCAACTGTTCTTCGTAGCATAGGGGCGAGTGGAAAGA
. : . : . : . : . : . :
JMFS093F11+ GTCGATCGGACTAGCTGTTGAGTCGTTGTCGGACATGGAGACATGGCTGTTCTGCTTCCG
JMSF015B21+ GTCGATCGGACTAGCTGTTGAGTCGTTGTCGGACATGGAGACATGGCTGTTCTGCTTCCG
JMSF038J15+ GTCGATCGGACTAGCTGTTGAGTCGTTGTCGGACATGGAGACATGGCTGTTCTGCTTCCG
JMSF003J23+ NTCGATCGGACTAGCTGTTGAGTCGTTGTCGGACANGGAGACATGGCTGTTCTGCTTCCG
JMSF015I04+ GTCGGACANGGAGACATGGCTGTTCTGCTTCCG
JMSF021E18+ GTCGATCGGACTAGCTGTTGAGTCGTTGTCGGACATGGAGACATGGCTGTTCTGCTTCCG
JMFS053A09+ GTCGATCGGACTAGCTGTTGAGTCGTTGTCGGACATGGAGACATGGCTGTTCTGCTTCCG
____________________________________________________________
consensus GTCGATCGGACTAGCTGTTGAGTCGTTGTCGGACATGGAGACATGGCTGTTCTGCTTCCG
. : . : . : . : . : . :
JMFS093F11+ GTGATTCTTCTGGTAGTAATGGTGGCCGGAATGTGAATTGGAGTTGGAATTTGGAGCTGC
JMSF015B21+ GTGATTCTTCTGGTAGTAATGGTGGCCGGAATGTGAATTGGAGTTGGAATTTGGAGCTGC
JMSF038J15+ GTGATTCTTCTGGTAGTAATGGTGGCCGGAATGTGAATTGGAGTTGGAATTNGGAGCTGC
JMSF003J23+ GTGATTCTTCTGGTAGTAATGGTGGCCGGAATGTGAATNGGAGTTGGAATTNGGAGCTGC
JMSF015I04+ GTGATTCTTCTGGTAGTAATGGTGGCCGGAATGTGAATTGGAGTTGGAATTTGGAGCTGC
JMSF021E18+ GTGATTCTTCTGGTAGTAATGGTGGCCGGAATGTGAATTGGAGTTGGAATTTGGAGCTGC
JMFS053A09+ GTGATTCTTCTGGTAGTAATGGTGGCCGGAATGTGAATTGGAGTTGGAATTTGGAGCTGC
____________________________________________________________
consensus GTGATTCTTCTGGTAGTAATGGTGGCCGGAATGTGAATTGGAGTTGGAATTTGGAGCTGC
. : . : . : . : . : . :
JMFS093F11+ TTTCTCCATTCCGAACGAGTTCGCCGGAAAAAAACTTCAAGTCAGTATCGGGAAAAAGAG
JMSF015B21+ TTTCTCCATTCCGAACGAGTTCGCCGGAAAAAAACTTCAAGTCAGTATCGGGAAAAAGAG
JMSF038J15+ TTTCTCCATTCCGAACGAGTTCGCCGGAAAAAAACTTCAAGTCAGTATCGGGAAAAAGAG
JMSF003J23+ TTTCTCCATTCCGAACGAGTTCGCCGGAAAAAAACTTCAAGTCAGTATCGGGAAAAAGAG
JMSF015I04+ TTTCTCCATTCCGAACGAGTTCGCCGGAAAAAAACTTCAAGTCAGTATCGGGAAAAAGAG
JMSF021E18+ TTTCTCCATTCCGAACGAGTTCGCCGGAAAAAAACTTCAAGTCAGTATCGGGAAAAAGAG
JMFS053A09+ TTTCTCCATTCCGAACGAGTTCGCCGGAAAAAAACTTCAAGTCAGTATCGGGAAAAAGAG
____________________________________________________________
consensus TTTCTCCATTCCGAACGAGTTCGCCGGAAAAAAACTTCAAGTCAGTATCGGGAAAAAGAG
. : . : . : . : . : . :
JMFS093F11+ AACGAAAGAAA
JMSF015B21+ AACGAAAGAAAGGT-TTTTTGTTTGTGGAGAGAAACTTTGCC
JMSF038J15+ AACGAAAGAAAGGTCTTTTTGTTTGTGGAGAGAAACT
JMSF003J23+ AACGAAAGAAAGGT-TTCTTGTTTGTGGAGAGAAACTTTGCC
JMSF015I04+ AACGAAAGAAAGGT-TTTTTGTTTGTGGAGAGAAACTNTGCC
JMSF021E18+ AACGAAAGAAAGGT-TTTTTGTTTGTGGAGAGAAACTTTGCC
JMFS053A09+ AACGAAAGAAAGGT-TTTTTGTTTGTGGAGAGAAACATTGCGGAAAGGAAATGCCGATCG
____________________________________________________________
consensus AACGAAAGAAAGGT-TTTTTGTTTGTGGAGAGAAACTTTGCCGAAAGGAAATGCCGATCG