Contig 009029:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS006H04Sequence572009029 (9)ref|XP_009764762.1|2e-53PREDICTED: protein VAC14 homolog [Nicotiana sylvestris]
JMFS031D03Sequence560009029 (9)ref|XP_009764762.1|1e-63PREDICTED: protein VAC14 homolog [Nicotiana sylvestris]
JMFS042C12Sequence640009029 (9)ref|XP_002525997.1|4e-117conserved hypothetical protein [Ricinus communis] gb|EEF36421.1| conserved hypot
JMFS049H04Sequence606009029 (9)ref|XP_006343179.1|7e-20PREDICTED: protein VAC14 homolog [Solanum tuberosum]
JMFS098G05Sequence638009029 (9)ref|XP_009764762.1|2e-78PREDICTED: protein VAC14 homolog [Nicotiana sylvestris]
JMFS140C10Sequence625009029 (9)ref|XP_009764762.1|3e-75PREDICTED: protein VAC14 homolog [Nicotiana sylvestris]
JMSF014D23Sequence156009029 (9)711008503 (3)ref|XP_009797957.1|4e-19PREDICTED: protein VAC14 homolog isoform X1 [Nicotiana sylvestris]
JMSF018L10Sequence557009029 (9)ref|XP_009764762.1|5e-32PREDICTED: protein VAC14 homolog [Nicotiana sylvestris]771008503 (3)ref|XP_007225206.1|3e-33hypothetical protein PRUPE_ppa002039mg [Prunus persica] gb|EMJ26405.1| hypotheti
JMSF019C14Sequence384009029 (9)ref|XP_009764762.1|2e-13PREDICTED: protein VAC14 homolog [Nicotiana sylvestris]773008503 (3)ref|XP_007225206.1|9e-34hypothetical protein PRUPE_ppa002039mg [Prunus persica] gb|EMJ26405.1| hypotheti

Alignment

This contig is upended


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JMFS042C12+                              CTTAGCATATTANATAAACCATCAAGGAAATCAGGAAGGAA
                      ____________________________________________________________
consensus                                CTTAGCATATTANATAAACCATCAAGGAAATCAGGAAGGAA
 
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JMFS042C12+           ACCAAGCATATCTATATCTGGAACACTGTCTAATACTGTGATCCACCCGACCAAAAATTG
                      ____________________________________________________________
consensus             ACCAAGCATATCTATATCTGGAACACTGTCTAATACTGTGATCCACCCGACCAAAAATTG
 
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JMFS042C12+           CCGCACATAAGGATTGAGGACATTCATCCGTTCTCTCAACAATGGTATAAATTCTTCAAT
                      ____________________________________________________________
consensus             CCGCACATAAGGATTGAGGACATTCATCCGTTCTCTCAACAATGGTATAAATTCTTCAAT
 
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JMFS042C12+           GCTGAATTGATCACTCTCAGTGACAATATCCTTCACAAGTCTATCTAAAAGATGTGCAGC
                      ____________________________________________________________
consensus             GCTGAATTGATCACTCTCAGTGACAATATCCTTCACAAGTCTATCTAAAAGATGTGCAGC
 
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JMFS042C12+           ACTTTGCACACTGGAATCTGAGTCTGCTGAGAGTTTGCACAAAGCATCAAAGATCTCATT
                      ____________________________________________________________
consensus             ACTTTGCACACTGGAATCTGAGTCTGCTGAGAGTTTGCACAAAGCATCAAAGATCTCATT
 
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JMFS042C12+           GAAAAACACAATAAAATCTCCTCTTACGACCTTGGCTATGTTATACAGGGCTTCACAAGC
JMFS098G05+                                             GCTATATTATACAGAGCTTCACAGGC
JMFS031D03+                                                                     GC
JMFS140C10+                                       ACCTTTGCTATATTATACAGAGCTTCACAGGC
                      ____________________________________________________________
consensus             GAAAAACACAATAAAATCTCCTCTTACGACCTTTGCTATATTATACAGAGCTTCACAGGC
 
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JMFS042C12+           ATAATAGCGAACTCTGCTATCTTGATCAGAAAAGGAATTGAGGACTGGTGGTACTATTTT
JMFS098G05+           ATAATAACGAACTCTACTATCTTGATCCGAAAAGGAGTTCAGTACAGGTGGCACAATTTG
JMFS031D03+           ATAATAACGAACTCTACTATCTTGATCCGAAAAGGAGTTCAGTACAGGTGGCACAATTTG
JMFS140C10+           ATAATAACGAACTCTACTATCTTGATCCGAAAAGGAGTTCAGTACAGGTGGCACAATTTG
JMFS006H04+                                              AGTTCAGTACAGGTGGCACAATTTG
                      ____________________________________________________________
consensus             ATAATAACGAACTCTACTATCTTGATCCGAAAAGGAGTTCAGTACAGGTGGCACAATTTG
 
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JMFS042C12+           CTCAAGATGCTGTGCTGCTTCAGTAGTCAAACCCACAGTTGCGGCAGCTAAACCTATCAA
JMFS098G05+           CTCAAGATGCTGAGCTGCTTCAGAAGTCAAACCCACAGTTGCAGCAGCTAACCCTATCAA
JMFS031D03+           CTCAAGATGCTGAGCTGCTTCAGAAGTCAAACCCACAGTTGCAGCAGCTAACCCTATCAA
JMFS140C10+           CTCAAGATGCTGAGCTGCTTCAGAAGTCAAACCCACAGTTGCAGCAGCTAACCCTATCAA
JMFS006H04+           CTCAAGATGCTGAGCTGCTTCAGAAGTCAAACCCACAGTTGCAGCAGCTAACCCTATCAA
                      ____________________________________________________________
consensus             CTCAAGATGCTGAGCTGCTTCAGAAGTCAAACCCACAGTTGCAGCAGCTAACCCTATCAA
 
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JMFS042C12+           TCCTCCTTTCCGGTGATTTGCTTGGGGAGAGTAGGTAAACTCATGGGTCAACAAATGGAT
JMFS098G05+           TCCTCCTTTCCGGTGATTGGCTTGGGGAGAGTAGGTATACTCCTCGGTCAACAAATTGAT
JMFS031D03+           TCCTCCTTTCCGGTGATTGGCTTGGGGAGAGTAGGTATACTCCTCGGTCAACAAATTGAT
JMFS140C10+           TCCTCCTTTCCGGTGATTGGCTTGGGGAGAGTAGGTATACTCCTCGGTCAACAAATTGAT
JMFS006H04+           TCCTCCTTTCCGGTGATTGGCTTGGGGAGAGTAGGTATACTCCTCGGTCAACAAATTGAT
JMSF018L10+                   TCCGGTGATTGGCTTGGGGAGAGTAGGTATACTCCTCGGTCAACAAATTGAT
JMFS049H04+                                                               AAATTGAT
                      ____________________________________________________________
consensus             TCCTCCTTTCCGGTGATTGGCTTGGGGAGAGTAGGTATACTCCTCGGTCAACAAATTGAT
 
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JMFS042C12+           CACGGCATTAATCTTGTCGTGATCAGCCGCCGCTACCAATTGCTTCACAATCCCTTCCAC
JMFS098G05+           CACAGCAGTAATCTTGTCGTGATCACCAGCTCCAGCCAACTGTTTCACTATCCCCTCCAA
JMFS031D03+           CACAGCAGTAATCTTGTCGTGATCACCAGCTCCAGCCAACTGTTTCACTATCCCCTCCAA
JMFS140C10+           CACAGCAGTAATCTTGTCGTGATCACCAGCTCCAGCCAACTGTTTCACTATCCCCTCCAA
JMSF019C14+                                        CTCCAGCCAACTGNTTCACTATCCCCTCCAA
JMFS006H04+           CACAGCAGTAATCTTGTCGTGATCACCAGCTCCAGCCAACTGTTTCACTATCCCCTCCAA
JMSF018L10+           CACAGCAGTAATCTTGTCGTGATCACCAGCTCCAGCCAACTGTTTCACTATCCCCTCCAA
JMFS049H04+           CACAGCAGTAATCTTGTCGTGATCACCAGCTCCAGCCAACTGTTTCACTATCCCCTCCAA
                      ____________________________________________________________
consensus             CACAGCAGTAATCTTGTCGTGATCACCAGCTCCAGCCAACTGTTTCACTATCCCCTCCAA
 
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JMFS042C12+           CTCGAGAGCCGCATTCTTGCGCTTCTCGTAGAGCTTATCGGAGA                
JMFS098G05+           CTCCAGAGCTGCATTCTTGCGCTTCTCGTAGAGCTTATCAGAGAGGTTCCGGAGAACCGC
JMFS031D03+           CTCCAGAGCTGCATTCTTGCGCTTCTCGTAGAGCTTATCAGAGAGGTTCCGGAGAACCGC
JMFS140C10+           CTCCAGAGCTGCATTCTTGCGCTTCTCGTAGAGCTTATCAGAGAGGTTCCGGAGAACCGC
JMSF019C14+           CTCCAGAGCTGCATTCTTGCGCTTCTCGTAGAGCTTATCAGAGAGGTTCCGGAGAACCGC
JMFS006H04+           CTCCAGAGCTGCATTCTTGCGCTTCTCGTAGAGCTTATCAGAGAGGTTCCGGAGAACCGC
JMSF018L10+           CTCCAGAGCTGCATTCTTGCGCTTCTCGTAGAGCTTATCAGAGAGGTTCCGGAGAACCGC
JMFS049H04+           CTCCAGAGCTGCATTCTTGCGCTTCTCGTAGAGCTTATCAGAGAGGTTCCNGAGAACCGC
                      ____________________________________________________________
consensus             CTCCAGAGCTGCATTCTTGCGCTTCTCGTAGAGCTTATCAGAGAGGTTCCGGAGAACCGC
 
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JMFS098G05+           AGCCGGAATCACAGACAAAGCCTCCGAAGTAGCCATACTAGTCAATTTCACACAAAACCC
JMFS031D03+           AGCCGGAATCACAGACAAAGCCTCCGAAGTAGCCATACTAGTCAATTTCACACAAAACCC
JMFS140C10+           AGCCGGAATCACAGACAAAGCCTCCGAAGTAGCCATACTAGTCAATTTCACACAAAACCC
JMSF019C14+           AGCCGGAATCACAGACAAAGCCTCCGAAGTAGCCATACTAGTCAATTTCACACAAAACCC
JMFS006H04+           AGCCGGAATCACAGACAAAGCCTCCGAAGTAGCCATACTAGTCAATTTCACACAAAACCC
JMSF018L10+           AGCCGGAATCACAGACAAAGCCTCCGAAGTAGCCATACTAGTCAATTTCACACAAAACCC
JMFS049H04+           AGCCGGAATCACAGACAAAGCCTCCGAAGTAGCCATACTAGTCAATTTCACACAAAACCC
                      ____________________________________________________________
consensus             AGCCGGAATCACAGACAAAGCCTCCGAAGTAGCCATACTAGTCAATTTCACACAAAACCC
 
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JMFS098G05+           TAGACACAGAAAAAGAAGAAACTATATACACATACAACACACTC-AAACACACAATCAAA
JMFS031D03+           TAGACACAGAAAAAGAAGAAACTATATACACATACAACACACTC-AAACACACAATCAAA
JMFS140C10+           TAGACACAGAAAAAGAAGAAACTATATACACATACAACACACTC-AAACACACAATCAAA
JMSF019C14+           TAGACACAGAAAAAGAAGAAACTATATACACATACAACACACTCAAAACACACAATCAAA
JMFS006H04+           TAGACACAGAAAAAGAAGAAACTATATACACATACAACACACTC-AAACACACAATCAAA
JMSF018L10+           TAGACACAGAAAAAGAAGAAACTATATACACATACAACACACTC-AAACACACAATCAAA
JMFS049H04+           TAGACACAGAAAAAGAAGAAACTATATACACATACAACACACTC-AAACACACAATCAAA
                      ____________________________________________________________
consensus             TAGACACAGAAAAAGAAGAAACTATATACACATACAACACACTC-AAACACACAATCAAA
 
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JMFS098G05+           TTCCCTTTCTAATCTCCTCCTCCAGAAGCTGAACCATCCCTCCCCCAATCACCC-TACGT
JMFS031D03+           TTCCCTTTCTAATCTCCTCCTCCAGAAGCTGAACCATCCCTCCCCCAATCACCC-TACGT
JMFS140C10+           TTCCCTTTCTAATCTCCTCCTCCAGAAGCTGAACCATCCCTCCCCCAATCACCC-TACGT
JMSF019C14+           TTCCCTTTCTAATCTCCTCCTCCAGAAGCTGAACCATCCCTCCCCCAATCACCC-TACGT
JMSF014D23+                             CCTCCAGAAGCTGAACCATCCCTCCCCCAATCACCCGTACGT
JMFS006H04+           TTCCCTTTCTAATCTCCTCCTCCAGAAGCTGAACCATCCCTCCCCCAATCACCC-TACGT
JMSF018L10+           TTCCCTTTCTAATCTCCTCCTCCAGAAGCTGAACCATCCCTCCCCCAATCACCC-TACGT
JMFS049H04+           TTCCCTTTCTAATCTCCTCCTCCAGAAGCTGAACCATCCCTCCCCCAATCACCC-TACGT
                      ____________________________________________________________
consensus             TTCCCTTTCTAATCTCCTCCTCCAGAAGCTGAACCATCCCTCCCCCAATCACCC-TACGT
 
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JMFS098G05+           GTATATATAATATATACACACACATATATATAGGTGGGTATATGTAACTCTGTGGAATAC
JMFS031D03+           GTATATATAATATATACACACACATATATATAGGTGGGTATATGTAACTCTGTGGAATAC
JMFS140C10+           GTATATATAATATATACACACACATATATATAGGTGGGTATATGTAACTCTGTGGAATAC
JMSF019C14+           GTATATATAATATATACACACACATATATATAGGTGGGTATATGTAACTCTGTGGAATAC
JMSF014D23+           GTATATATAATATATACACACACATATATATAGGTGGGTATATGTAACTCTGTGGAATAC
JMFS006H04+           GTATATATAATATATACACACACATATATATAGGTGGGTATATGTAACTCTGTGGAATAC
JMSF018L10+           GTATATATAATATATACACACACATATATATAGGTGGGTATATGTAACTCTGTGGAATAC
JMFS049H04+           GTATATATAATATATACACACACATATATATAGGTGGGTATATGTAACTCTGTGGAATAC
                      ____________________________________________________________
consensus             GTATATATAATATATACACACACATATATATAGGTGGGTATATGTAACTCTGTGGAATAC
 
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JMFS098G05+           AAGTGAAGAACAGATCTAATGGAGAAGAAAGAAAG                         
JMFS031D03+           AAGTGAAGAACAGATCTA                                          
JMFS140C10+           AAGTGAAGAACAGATCTAATGGAGAAGAAAGAAAGAAA                      
JMSF019C14+           AAGTGAAGAACAGATCTAATGGAGAAGAAAGAAAGAAATGGAAATCAAT           
JMSF014D23+           AAGTGAAGAACAGATCTAATGGAGAAGAAAGAAAGAAATGGAAATCAATCCAC       
JMFS006H04+           AAGTGAAGAACAGATCTAATGGAGAAGAAAGAAAGAAATGGAAATCAATCCACGATTGAA
JMSF018L10+           AAGTGAAGAACAGATNTAATGGAGAAGAAAGAAAGAAATGGAAATCAATCCACGATTGAA
JMFS049H04+           AAGTGAAGAACAGATCTAATGGAGAAGAAAGAAAGAAATGGAAATCAATCCACGATTGAA
                      ____________________________________________________________
consensus             AAGTGAAGAACAGATCTAATGGAGAAGAAAGAAAGAAATGGAAATCAATCCACGATTGAA
 
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JMFS006H04+           TAGATCTTG                                                   
JMSF018L10+           TAGATCTTGGGGGTTTCTGTTTTATACAAACCTTTTTTTATTACCCTTTTTGGGGTTTTT
JMFS049H04+           TAGATCTTGGGGGTTTCTGTTTTATACAAACCTTTTTTTATTACCCTTTTTGGGGTTTTT
                      ____________________________________________________________
consensus             TAGATCTTGGGGGTTTCTGTTTTATACAAACCTTTTTTTATTACCCTTTTTGGGGTTTTT
 
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JMSF018L10+           TTTTGTTTAATTTGATGAGAGAGACT                                  
JMFS049H04+           TTTTGTTTAATTTGATGAGAGAGACTGAGAGAGAGAGAAGATAGTATGTAAATTTTAAGC
                      ____________________________________________________________
consensus             TTTTGTTTAATTTGATGAGAGAGACTGAGAGAGAGAGAAGATAGTATGTAAATTTTAAGC
 
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JMFS049H04+           TAAGCGAGTCGATGACTCGCTGACTCAGTAATTTTAACAGTATAATGATGTGAAGCTGTC
                      ____________________________________________________________
consensus             TAAGCGAGTCGATGACTCGCTGACTCAGTAATTTTAACAGTATAATGATGTGAAGCTGTC