Contig 009027:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS100E07+                                                             AGTTGGTGAA
                      ____________________________________________________________
consensus                                                               AGTTGGTGAA
 
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JMFS100E07+           TTACCGCCCCACTCAGTTACTTCAGGAAGTTGCACCCCATTAACAACTAGACTAGTAATC
                      ____________________________________________________________
consensus             TTACCGCCCCACTCAGTTACTTCAGGAAGTTGCACCCCATTAACAACTAGACTAGTAATC
 
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JMFS100E07+           TGGCTTGGACCTGAAGCTTGAACAGGAATATTTGTAGGCAAATGTTCCTTGGTTTCAGTA
                      ____________________________________________________________
consensus             TGGCTTGGACCTGAAGCTTGAACAGGAATATTTGTAGGCAAATGTTCCTTGGTTTCAGTA
 
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JMFS100E07+           GTCTGTCCACATTGATTATCATTGCTTGCCTTTGGTGGTGGACTTGGCATATCCTGGATA
                      ____________________________________________________________
consensus             GTCTGTCCACATTGATTATCATTGCTTGCCTTTGGTGGTGGACTTGGCATATCCTGGATA
 
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JMFS100E07+           CCTGAACGGTGAAAAGGAAAATCTGAAGATAAGGAAAGTAGTTCTTTTGCAGCTTGAACT
                      ____________________________________________________________
consensus             CCTGAACGGTGAAAAGGAAAATCTGAAGATAAGGAAAGTAGTTCTTTTGCAGCTTGAACT
 
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JMFS100E07+           TCCCAGCTCTCATAAGTACTCTTGGGTGTGGGACTGGGAAGATCTGAGACATTTATTTTT
JMFS047E08+                                 TGGGTGTGGGACTGGGAAGATCTGAGACA-TTATTTTT
                      ____________________________________________________________
consensus             TCCCAGCTCTCATAAGTACTCTTGGGTGTGGGACTGGGAAGATCTGAGACATTTATTTTT
 
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JMFS100E07+           CCATTCTGATCAGGTGAATCACTTGACTTGGTAACTGACGCCAAATGAGTGCCAGAGTCT
JMFS047E08+           CCATTCTGATCAGGTGAATCACTTGACTTGGTAACTGACGCCAAATGAGTGCCAGAGTCT
                      ____________________________________________________________
consensus             CCATTCTGATCAGGTGAATCACTTGACTTGGTAACTGACGCCAAATGAGTGCCAGAGTCT
 
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JMFS100E07+           GTGTTTTCTGAGTTTGATACAGGTAAGGATCCAAATATTTGACCCATAATGCTCTGCATA
JMFS047E08+           GTGTTTTCTGAGTTTGATACAGGTAAGGATCCAAATATTTGACCCATAATGCTCTGCATA
                      ____________________________________________________________
consensus             GTGTTTTCTGAGTTTGATACAGGTAAGGATCCAAATATTTGACCCATAATGCTCTGCATA
 
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JMFS100E07+           TTATATTGCATCTCATGACTGGCCATGTCAGTTGGCTGAGACATGGTGTTACCATACAAT
JMFS047E08+           TTATATTGCATCTCATGACTGGCCATGTCAGTTGGCTGAGACATGGTGTTACCATACAAT
                      ____________________________________________________________
consensus             TTATATTGCATCTCATGACTGGCCATGTCAGTTGGCTGAGACATGGTGTTACCATACAAT
 
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JMFS100E07+           TTCTGATTTCCCTGACCTGTATCACTATCAGTATGAAGCCCACCACTATCATGCCCTATT
JMFS047E08+           TTCTGATTTCCCTGACCTGTATCACTATCAGTATGAAGCCCACCACTATCATGCCCTATT
                      ____________________________________________________________
consensus             TTCTGATTTCCCTGACCTGTATCACTATCAGTATGAAGCCCACCACTATCATGCCCTATT
 
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JMFS100E07+           TCCTGTTGTGCAAGACCCAAATGCACTTGCCCATCACTGGATGAATGCATCATGTTACAT
JMFS047E08+           TCCTGTTGTGCAAGACCCAAATGCACTTGCCCATCACTGGATGAATGCATCATGTTACAT
                      ____________________________________________________________
consensus             TCCTGTTGTGCAAGACCCAAATGCACTTGCCCATCACTGGATGAATGCATCATGTTACAT
 
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JMFS100E07+           TCTTGAGGTTTGTCA                                             
JMFS047E08+           TCTTGAGGTTTGTCAGAACACGAATTATTTTCCTTCAGTAAATTCAAGCATTGCAACAAA
                      ____________________________________________________________
consensus             TCTTGAGGTTTGTCAGAACACGAATTATTTTCCTTCAGTAAATTCAAGCATTGCAACAAA
 
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JMFS047E08+           GGACGGGGCTTCAACTCATCCGTCCTAACAGCATTTGGATGGACCTTATCATCACTATGG
                      ____________________________________________________________
consensus             GGACGGGGCTTCAACTCATCCGTCCTAACAGCATTTGGATGGACCTTATCATCACTATGG
 
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JMFS047E08+           TGCCCTTCGCTTTCTTTAACTGTTCCATTTGAACTTCCATGCCACCCAGCATGGCCTCTG
                      ____________________________________________________________
consensus             TGCCCTTCGCTTTCTTTAACTGTTCCATTTGAACTTCCATGCCACCCAGCATGGCCTCTG
 
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JMFS047E08+           CTATCCAAAGCTGCTTCAAGTCCTTGATCTTTGAGTGTTGCATTATCCAAAATTTGAGAA
                      ____________________________________________________________
consensus             CTATCCAAAGCTGCTTCAAGTCCTTGATCTTTGAGTGTTGCATTATCCAAAATTTGAGAA
 
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JMFS047E08+           GCTTTATGAAACTGCCCATGCAATGCATCACTTAAAAGTATTGACTCATTATGCTTGTCA
                      ____________________________________________________________
consensus             GCTTTATGAAACTGCCCATGCAATGCATCACTTAAAAGTATTGACTCATTATGCTTGTCA