Contig 009026:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS047D09Sequence622009026 (2)ref|XP_009763843.1|5e-46PREDICTED: protein MODIFIER OF SNC1 1 [Nicotiana sylvestris] ref|XP_009763844.1|
JMFS164E06Sequence603009026 (2)ref|XP_009763843.1|1e-49PREDICTED: protein MODIFIER OF SNC1 1 [Nicotiana sylvestris] ref|XP_009763844.1|

Alignment

This contig is upended


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JMFS164E06+                          ATTGGAACCCCATGCACTCACACTGGGTTCATGTGTTCTATCACT
JMFS047D09+                                                 TGGGTTCATGTGTTCTATCACT
                      ____________________________________________________________
consensus                            ATTGGAACCCCATGCACTCACACTGGGTTCATGTGTTCTATCACT
 
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JMFS164E06+           ACCAGCAGTAGATGGTCGACTACCGTTCCCACCAGAAGAAGGGCAGGCACTGAGATGACT
JMFS047D09+           ACCAGCAGTAGATGGTCGACTACCGTTCCCACCAGAAGAAGGGCAGGCACTGAGATGACT
                      ____________________________________________________________
consensus             ACCAGCAGTAGATGGTCGACTACCGTTCCCACCAGAAGAAGGGCAGGCACTGAGATGACT
 
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JMFS164E06+           CGGAGAGCTATTGCCACCATCAGCATTTGGGGACAATGTAGAAGAAGCCCATGCATTTGG
JMFS047D09+           CGGAGAGCTATTGCCACCATCAGCATTTGGGGACAATGTAGAAGAAGCCCATGCATTTGG
                      ____________________________________________________________
consensus             CGGAGAGCTATTGCCACCATCAGCATTTGGGGACAATGTAGAAGAAGCCCATGCATTTGG
 
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JMFS164E06+           GGTAGTTGAAGATGTTTTGCTTCCCCAGCTGAGAGTTCCCTTGGGAACAATTTCAACATC
JMFS047D09+           GGTAGTTGAAGATGTTTTGCTTCCCCAGCTGAGAGTTCCCTTGGGAACAATTTCAACATC
                      ____________________________________________________________
consensus             GGTAGTTGAAGATGTTTTGCTTCCCCAGCTGAGAGTTCCCTTGGGAACAATTTCAACATC
 
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JMFS164E06+           TGGATCCAATCCGTGGTTCTCTAATCTCTGACTTGGTAAATTCAAGGGTTTTGGAACAGC
JMFS047D09+           TGGATCCAATCCGTGGTTCTCTAATCTCTGACTTGGTAAATTCAAGGGTTTTGGAACAGC
                      ____________________________________________________________
consensus             TGGATCCAATCCGTGGTTCTCTAATCTCTGACTTGGTAAATTCAAGGGTTTTGGAACAGC
 
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JMFS164E06+           AACTTTGCCAAGGACAGTCATGCCACCTCTCCTTGCAGACGCCCACCTTCGCTCCCCAGT
JMFS047D09+           AACTTTGCCAAGGACAGTCATGCCACCTCTCCTTGCAGACGCCCACCTTCGCTCCCCAGT
                      ____________________________________________________________
consensus             AACTTTGCCAAGGACAGTCATGCCACCTCTCCTTGCAGACGCCCACCTTCGCTCCCCAGT
 
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JMFS164E06+           TAACATACTTGAAGTCATTGCTAATATATAGATCTAATGTCATCCAAACTACAACCTTAA
JMFS047D09+           TAACATACTTGAAGTCATTGCTAATATATAGATCTAATGTCATCCAAACTACAACCTTAA
                      ____________________________________________________________
consensus             TAACATACTTGAAGTCATTGCTAATATATAGATCTAATGTCATCCAAACTACAACCTTAA
 
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JMFS164E06+           ATCCACGGAGAGAAGAGGGAAATTAACCGGATCTGCGAAAGCTCCGATCTGTGAGTTGTT
JMFS047D09+           ATCCACGGAGAGAAGAGGGAAATTAACCGGATCTGCGAAAGCTCCGATCTGTGAGTTGTT
                      ____________________________________________________________
consensus             ATCCACGGAGAGAAGAGGGAAATTAACCGGATCTGCGAAAGCTCCGATCTGTGAGTTGTT
 
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JMFS164E06+           CGAAAAGGACAACAAAGTAACAAACACGTATGCATATAAATTATATCTATATATATAAAT
JMFS047D09+           CGAAAAGGACAACAAAGTAACAAACACGTATGCATATAAATTATATCTATATATATAAAT
                      ____________________________________________________________
consensus             CGAAAAGGACAACAAAGTAACAAACACGTATGCATATAAATTATATCTATATATATAAAT
 
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JMFS164E06+           ATATACGTATATATGGGAGGGAGAGAGAAAGAGAGAGGGAAGGAGAGGATATGGTGCGTA
JMFS047D09+           ATATACGTATATATGGGAGGGAGAGAGAAAGAGAGAGGGAAGGAGAGGATATGGTGCGTA
                      ____________________________________________________________
consensus             ATATACGTATATATGGGAGGGAGAGAGAAAGAGAGAGGGAAGGAGAGGATATGGTGCGTA
 
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JMFS164E06+           TATATGTATCGGTTTGTA                                          
JMFS047D09+           TATATGTATCGGTTTGTATAGAGGAATGGCGCAGGAGGACGGAGTGAGGAAGAGAGAGGG
                      ____________________________________________________________
consensus             TATATGTATCGGTTTGTATAGAGGAATGGCGCAGGAGGACGGAGTGAGGAAGAGAGAGGG