| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF029G21 | Sequence | 456 | 009023 (11) | sp|Q06450.2|ATP5E_IPOBA | 1e-42 | RecName: Full=ATP synthase subunit epsilon, mitochondrial; Short=ATPase subunit | 430 | 009023 (11) | sp|Q06450.2|ATP5E_IPOBA | 9e-43 | RecName: Full=ATP synthase subunit epsilon, mitochondrial; Short=ATPase subunit |
| JMFF049K14 | Sequence | 471 | 009023 (11) | sp|Q06450.2|ATP5E_IPOBA | 2e-42 | RecName: Full=ATP synthase subunit epsilon, mitochondrial; Short=ATPase subunit | 471 | 009023 (11) | sp|Q06450.2|ATP5E_IPOBA | 2e-42 | RecName: Full=ATP synthase subunit epsilon, mitochondrial; Short=ATPase subunit |
| JMFF050N11 | Sequence | 475 | 009023 (11) | sp|Q06450.2|ATP5E_IPOBA | 2e-42 | RecName: Full=ATP synthase subunit epsilon, mitochondrial; Short=ATPase subunit | 475 | 009023 (11) | sp|Q06450.2|ATP5E_IPOBA | 2e-42 | RecName: Full=ATP synthase subunit epsilon, mitochondrial; Short=ATPase subunit |
| JMFN004O19 | Sequence | 458 | 009023 (11) | sp|Q06450.2|ATP5E_IPOBA | 1e-42 | RecName: Full=ATP synthase subunit epsilon, mitochondrial; Short=ATPase subunit | |||||
| JMFN011A07 | Sequence | 456 | 009023 (11) | sp|Q06450.2|ATP5E_IPOBA | 8e-43 | RecName: Full=ATP synthase subunit epsilon, mitochondrial; Short=ATPase subunit | |||||
| JMFN012I21 | Sequence | 460 | 009023 (11) | sp|Q06450.2|ATP5E_IPOBA | 1e-42 | RecName: Full=ATP synthase subunit epsilon, mitochondrial; Short=ATPase subunit | |||||
| JMFS046H03 | Sequence | 482 | 009023 (11) | sp|Q06450.2|ATP5E_IPOBA | 2e-42 | RecName: Full=ATP synthase subunit epsilon, mitochondrial; Short=ATPase subunit | |||||
| JMSF044K12 | Sequence | 508 | 017929 | sp|Q06450.2|ATP5E_IPOBA | 3e-42 | RecName: Full=ATP synthase subunit epsilon, mitochondrial; Short=ATPase subunit | 461 | 009023 (11) | sp|Q06450.2|ATP5E_IPOBA | 1e-42 | RecName: Full=ATP synthase subunit epsilon, mitochondrial; Short=ATPase subunit |
This contig is upended
. : . : . : . : . : . :
JMFN004O19+ ACCCCTTTTGA
JMFN012I21+ ACCCCTTTTGA
rJMFF049K14- GA
JMFF049K14+ GA
JMFF050N11+ GA
JMFN011A07+ A
rJMFF050N11- GA
JMFS046H03+ GA
____________________________________________________________
consensus ACCCCTTTTGA
. : . : . : . : . : . :
JMFN004O19+ AATTGCATCATTTAATAACCAGAAAGCAATATCCGACAACAAAATGTGGTGGGGAGGAAT
JMFN012I21+ AATTGCATCATTTAATAACCAGAAAGCAATATCCGACAACAAAATGTGGTGGGGAGGAAT
rJMFF049K14- AATTGCATCATTTAATAACCAGAAAGCAATATCCGACAACAAAATGTGGTGGGGAGGAAT
JMFF049K14+ AATTGCATCATTTAATAACCAGAAAGCAATATCCGACAACAAAATGTGGTGGGGAGGAAT
JMFF050N11+ AATTGCATCATTTAATAACCAGAAAGCAATATCCGACAACAAAATGTGGTGGGGAGGAAT
JMFF029G21+ TAACCAGAAAGCAATATCCGACAACAAAATGTGGTGGGGAGGAAT
JMFN011A07+ AATTGCATCATTTAATAACCAGAAAGCAATATCCGACAACAAAATGTGGTGGGGAGGAAT
rJMFF029G21- AAATGTGGTGGGGAGGAAT
rJMFF050N11- AATTGCATCATTTAATAACCAGAAAGCAATATCCGACAACAAAATGTGGTGGGGAGGAAT
rJMSF044K12- ACCAGAAAGCAATATCCGACAACAAAATGTGGTGGGGAGGAAT
JMFS046H03+ AATTGCATCATTTAATAACCAGAAAGCAATATCCGACAACAAAATGTGGTGGGGAGGAAT
____________________________________________________________
consensus AATTGCATCATTTAATAACCAGAAAGCAATATCCGACAACAAAATGTGGTGGGGAGGAAT
. : . : . : . : . : . :
JMFN004O19+ GTTACATTTGTGTCTCTGAGCAGAATATCAAAGTTCTGCTGCTTCTGCAGCTCTAATTAT
JMFN012I21+ GTTACATTTGTGTCTCTGAGCAGAATATCAAAGTTCTGCTGCTTCTGCAGCTCTAATTAT
rJMFF049K14- GTTACATTTGTGTCTCTGAGCAGAATATCAAAGTTCTGCTGCTTCTGCAGCTCTAATTAT
JMFF049K14+ GTTACATTTGTGTCTCTGAGCAGAATATCAAAGTTCTGCTGCTTCTGCAGCTCTAATTAT
JMFF050N11+ GTTACATTTGTGTCTCTGAGCAGAATATCAAAGTTCTGCTGCTTCTGCAGCTCTAATTAT
JMFF029G21+ GTTACATTTGTGTCTCTGAGCAGAATATCAAAGTTCTGCTGCTTCTGCAGCTCTAATTAT
JMFN011A07+ GTTACATTTGTGTCTCTGAGCAGAATATCAAAGTTCTGCTGCTTCTGCAGCTCTAATTAT
rJMFF029G21- GTTACATTTGTGTCTCTGAGCAGAATATCAAAGTTCTGCTGCTTCTGCAGCTCTAATTAT
rJMFF050N11- GTTACATTTGTGTCTCTGAGCAGAATATCAAAGTTCTGCTGCTTCTGCAGCTCTAATTAT
rJMSF044K12- GTTACATTTGTGTCTCTGAGCAGAATATCAAAGTTCTGCTGCTTCTGCAGCTCTAATTAT
JMFS046H03+ GTTACATTTGTGTCTCTGAGCAGAATATCAAAGTTCTGCTGCTTCTGCAGCTCTAATTAT
____________________________________________________________
consensus GTTACATTTGTGTCTCTGAGCAGAATATCAAAGTTCTGCTGCTTCTGCAGCTCTAATTAT
. : . : . : . : . : . :
JMFN004O19+ TACTGAAAATATGTGATGCACTACATATGGTATAAGGTGCCAGGGCAGTGCAAAGTTGAA
JMFN012I21+ TACTGAAAATATGTGATGCACTACATATGGTATAAGGTGCCAGGGCAGTGCAAAGTTGAA
rJMFF049K14- TACTGAAAATATGTGATGCACTACATATGGTATAAGGTGCCAGGGCAGTGCAAAGTTGAA
JMFF049K14+ TACTGAAAATATGTGATGCACTACATATGGTATAAGGTGCCAGGGCAGTGCAAAGTTGAA
JMFF050N11+ TACTGAAAATATGTGATGCACTACATATGGTATAAGGTGCCAGGGCAGTGCAAAGTTGAA
JMFF029G21+ TACTGAAAATATGTGATGCACTACATATGGTATAAGGTGCCAGGGCAGTGCAAAGTTGAA
JMFN011A07+ TACTGAAAATATGTGATGCACTACATATGGTATAAGGTGCCAGGGCAGTGCAAAGTTGAA
rJMFF029G21- TACTGAAAATATGTGATGCACTACATATGGTATAAGGTGCCAGGGCAGTGCAAAGTTGAA
rJMFF050N11- TACTGAAAATATGTGATGCACTACATATGGTATAAGGTGCCAGGGCAGTGCAAAGTTGAA
rJMSF044K12- TACTGAAAATATGTGATGCACTACATATGGTATAAGGTGCCAGGGCAGTGCAAAGTTGAA
JMFS046H03+ TACTGAAAATATGTGATGCACTACATATGGTATAAGGTGCCAGGGCAGTGCAAAGTTGAA
____________________________________________________________
consensus TACTGAAAATATGTGATGCACTACATATGGTATAAGGTGCCAGGGCAGTGCAAAGTTGAA
. : . : . : . : . : . :
JMFN004O19+ CAATCAAAAGCAGTTATTCGGCAAACACAACCTGAGAACACCCTCATTCTTCACCTGTAT
JMFN012I21+ CAATCAAAAGCAGTTATTCGGCAAACACAACCTGAGAACACCCTCATTCTTCACCTGTAT
rJMFF049K14- CAATCAAAAGCAGTTATTCGGCAAACACAACCTGAGAACACCCTCATTCTTCACCTGTAT
JMFF049K14+ CAATCAAAAGCAGTTATTCGGCAAACACAACCTGAGAACACCCTCATTCTTCACCTGTAT
JMFF050N11+ CAATCAAAAGCAGTTATTCGGCAAACACAACCTGAGAACACCCTCATTCTTCACCTGTAT
JMFF029G21+ CAATCAAAAGCAGTTATTCGGCAAACACAACCTGAGAACACCCTCATTCTTCACCTGTAT
JMFN011A07+ CAATCAAAAGCAGTTATTCGGCAAACACAACCTGAGAACACCCTCATTCTTCACCTGTAT
rJMFF029G21- CAATCAAAAGCAGTTATTCGGCAAACACAACCTGAGAACACCCTCATTCTTCACCTGTAT
rJMFF050N11- CAATCAAAAGCAGTTATTCGGCAAACACAACCTGAGAACACCCTCATTCTTCACCTGTAT
rJMSF044K12- CAATCAAAAGCAGTTATTCGGCAAACACAACCTGAGAACACCCTCATTCTTCACCTGTAT
JMFS046H03+ CAATCAAAAGCAGTTATTCGGCAAACACAACCTGAGAACACCCTCATTCTTCACCTGTAT
____________________________________________________________
consensus CAATCAAAAGCAGTTATTCGGCAAACACAACCTGAGAACACCCTCATTCTTCACCTGTAT
. : . : . : . : . : . :
JMFN004O19+ CTGAACGGATGGCGGGTTTCTGGGGCTTGCCATCCACCCATTTGGAGAAGGAGAAGTGGA
JMFN012I21+ CTGAACGGATGGCGGGTTTCTGGGGCTTGCCATCCACCCATTTGGAGAAGGAGAAGTGGA
rJMFF049K14- CTGAACGGATGGCGGGTTTCTGGGGCTTGCCATCCACCCATTTGGAGAAGGAGAAGTGGA
JMFF049K14+ CTGAACGGATGGCGGGTTTCTGGGGCTTGCCATCCACCCATTTGGAGAAGGAGAAGTGGA
JMFF050N11+ CTGAACGGATGGCGGGTTTCTGGGGCTTGCCATCCACCCATTTGGAGAAGGAGAAGTGGA
JMFF029G21+ CTGAACGGATGGCGGGTTTCTGGGGCTTGCCATCCACCCATTTGGAGAAGGAGAAGTGGA
JMFN011A07+ CTGAACGGATGGCGGGTTTCTGGGGCTTGCCATCCACCCATTTGGAGAAGGAGAAGTGGA
rJMFF029G21- CTGAACGGATGGCGGGTTTCTGGGGCTTGCCATCCACCCATTTGGAGAAGGAGAAGTGGA
rJMFF050N11- CTGAACGGATGGCGGGTTTCTGGGGCTTGCCATCCACCCATTTGGAGAAGGAGAAGTGGA
rJMSF044K12- CTGAACGGATGGCGGGTTTCTGGGGCTTGCCATCCACCCATTTGGAGAAGGAGAAGTGGA
JMFS046H03+ CTGAACGGATGGCGGGTTTCTGGGGCTTGCCATCCACCCATTTGGAGAAGGAGAAGTGGA
____________________________________________________________
consensus CTGAACGGATGGCGGGTTTCTGGGGCTTGCCATCCACCCATTTGGAGAAGGAGAAGTGGA
. : . : . : . : . : . :
JMFN004O19+ CCTTCTCGCGGCTCAGTGCTTCGGATCTGTGGGGCTCCTTGAGGCAGTTCCTCACCATGT
JMFN012I21+ CCTTCTCGCGGCTCAGTGCTTCGGATCTGTGGGGCTCCTTGAGGCAGTTCCTCACCATGT
rJMFF049K14- CCTTCTCGCGGCTCAGTGCTTCGGATCTGTGGGGCTCCTTGAGGCAGTTCCTCACCATGT
JMFF049K14+ CCTTCTCGCGGCTCAGTGCTTCGGATCTGTGGGGCTCCTTGAGGCAGTTCCTCACCATGT
JMFF050N11+ CCTTCTCGCGGCTCAGTGCTTCGGATCTGTGGGGCTCCTTGAGGCAGTTCCTCACCATGT
JMFF029G21+ CCTTCTCGCGGCTCAGTGCTTCGGATCTGTGGGGCTCCTTGAGGCAGTTCCTCACCATGT
JMFN011A07+ CCTTCTCGCGGCTCAGTGCTTCGGATCTGTGGGGCTCCTTGAGGCAGTTCCTCACCATGT
rJMFF029G21- CCTTCTCGCGGCTCAGTGCTTCGGATCTGTGGGGCTCCTTGAGGCAGTTCCTCACCATGT
rJMFF050N11- CCTTCTCGCGGCTCAGTGCTTCGGATCTGTGGGGCTCCTTGAGGCAGTTCCTCACCATGT
rJMSF044K12- CCTTCTCGCGGCTCAGTGCTTCGGATCTGTGGGGCTCCTTGAGGCAGTTCCTCACCATGT
JMFS046H03+ CCTTCTCGCGGCTCAGTGCTTCGGATCTGTGGGGCTCCTTGAGGCAGTTCCTCACCATGT
____________________________________________________________
consensus CCTTCTCGCGGCTCAGTGCTTCGGATCTGTGGGGCTCCTTGAGGCAGTTCCTCACCATGT
. : . : . : . : . : . :
JMFN004O19+ TGGCGCACAGGTTGGAGTATGTGATGTAAGTCATTCCCGCTGCTCTCCAGAACGGCACCG
JMFN012I21+ TGGCGCACAGGTTGGAGTATGTGATGTAAGTCATTCCCGCTGCTCTCCAGAACGGCACCG
rJMFF049K14- TGGCGCACAGGTTGGAGTATGTGATGTAAGTCATTCCCGCTGCTCTCCAGAACGGCACCG
JMFF049K14+ TGGCGCACAGGTTGGAGTATGTGATGTAAGTCATTCCCGCTGCTCTCCAGAACGGCACCG
JMFF050N11+ TGGCGCACAGGTTGGAGTATGTGATGTAAGTCATTCCCGCTGCTCTCCAGAACGGCACCG
JMFF029G21+ TGGCGCACAGGTTGGAGTATGTGATGTAAGTCATTCCCGCTGCTCTCCAGAACGGCACCG
JMFN011A07+ TGGCGCACAGGTTGGAGTATGTGATGTAAGTCATTCCCGCTGCTCTCCAGAACGGCACCG
rJMFF029G21- TGGCGCACAGGTTGGAGTATGTGATGTAAGTCATTCCCGCTGCTCTCCAGAACGGCACCG
rJMFF050N11- TGGCGCACAGGTTGGAGTATGTGATGTAAGTCATTCCCGCTGCTCTCCAGAACGGCACCG
rJMSF044K12- TGGCGCACAGGTTGGAGTATGTGATGTAAGTCATTCCCGCTGCTCTCCAGAACGGCACCG
JMFS046H03+ TGGCGCACAGGTTGGAGTATGTGATGTAAGTCATTCCCGCTGCTCTCCAGAACGGCACCG
____________________________________________________________
consensus TGGCGCACAGGTTGGAGTATGTGATGTAAGTCATTCCCGCTGCTCTCCAGAACGGCACCG
. : . : . : . : . : . :
JMFN004O19+ CTGCGTTCGACGCCATTTTTGTTCTTC
JMFN012I21+ CTGCGTTCGACGCCATTTTTGTTCTTCTC
rJMFF049K14- CTGCGTTCGACGCCATTTTTGTTCTTCTCGCTAACGTCCAATCTCTTCT
JMFF049K14+ CTGCGTTCGACGCCATTTTTGTTCTTCTCGCTAACGTCCAATCTCTTCT
JMFF050N11+ CTGCGTTCGACGCCATTTTTGTTCTTCTCGCTAACGTCCAATCTCTTCTGC
JMFF029G21+ CTGCGTTCGACGCCATTTTTGTTCTTCTCGCTAACGTCCAATCTCTTCTGC
JMFN011A07+ CTGCGTTCGACGCCATTTTTGTTCTTCTCGCTAAC
rJMFF029G21- CTGCGTTCGACGCCATTTTTGTTCTTCTCGCTAACGTCCAATCTCTTCTGC
rJMFF050N11- CTGCGTTCGACGCCATTTTTGTTCTTCTCGCTAACGTCCAATCTCTTCTGC
rJMSF044K12- CTGCGTTCGACGCCATTTTTGTTCTTCTCGCTAACGTCCAATCTCTTCTGC
JMFS046H03+ CTGCGTTCGACGCCATTTTTGTTCTTCTCGCTAACGTCCAATCTCTTCTGCGGTTTCACC
____________________________________________________________
consensus CTGCGTTCGACGCCATTTTTGTTCTTCTCGCTAACGTCCAATCTCTTCTGCGGTTTCACC