Contig 009020:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFN042E08+                                                                    CCC
                      ____________________________________________________________
consensus                                                                      CCC
 
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JMFN042E08+           AAAAGAATATGACAGTCATCATTGCCAAGTAACCGCCAAGAATAACTCCGGTAGCAAAAA
                      ____________________________________________________________
consensus             AAAAGAATATGACAGTCATCATTGCCAAGTAACCGCCAAGAATAACTCCGGTAGCAAAAA
 
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JMFN042E08+           TCTCAGCCAGCTTCCAACTGTCAGGAAGAGGGGATGGTTTCACCCTGTCTTTTGATATTG
JMFS013E03+                                                        TGTCTTTTGATATTG
                      ____________________________________________________________
consensus             TCTCAGCCAGCTTCCAACTGTCAGGAAGAGGGGATGGTTTCACCCTGTCTTTTGATATTG
 
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JMFN042E08+           TCATAATAGTACCATCATTCAGAATAGCAATGATAAGAACCATGAATGGTGGGAAATCAA
JMFS013E03+           TCATAATAGTACCATCATTCAGAATAGCAATGATAAGAACCATGAATGGTGGGAAATCAA
                      ____________________________________________________________
consensus             TCATAATAGTACCATCATTCAGAATAGCAATGATAAGAACCATGAATGGTGGGAAATCAA
 
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JMFN042E08+           ATCTCCATATTAGAGCCAGCAGCATGAAACCAAGCACTATACGAATTGTGATAGAAACAG
JMFS013E03+           ATCTCCATATTAGAGCCAGCAGCATGAAACCAAGCACTATACGAATTGTGATAGAAACAG
                      ____________________________________________________________
consensus             ATCTCCATATTAGAGCCAGCAGCATGAAACCAAGCACTATACGAATTGTGATAGAAACAG
 
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JMFN042E08+           CATAAATCGTGTAGTTTTTCATCCTCTGAAAGATTGCTCGACTGGTCAAAACAGCACTGA
JMFS013E03+           CATAAATCGTGTAGTTTTTCATCCTCTGAAAGATTGCTCGACTGGTCAAAACAGCACTGA
JMFS051B09+                                              GCTCGACTGGTCAAAACAGCACTGA
                      ____________________________________________________________
consensus             CATAAATCGTGTAGTTTTTCATCCTCTGAAAGATTGCTCGACTGGTCAAAACAGCACTGA
 
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JMFN042E08+           TGATGACACTGAGACCAGGTTCAGTAAGAACAATATCAGATGCACTGCGTGCTGCATCAG
JMFS013E03+           TGATGACACTGAGACCAGGTTCAGTAAGAACAATATCAGATGCACTGCGTGCTGCATCAG
JMFS051B09+           TTATGACACTGAGACCGGGTTCAGTAAGAACGATATCAGAAGCACTGCGGGCCGCATCAG
                      ____________________________________________________________
consensus             TGATGACACTGAGACCAGGTTCAGTAAGAACAATATCAGATGCACTGCGTGCTGCATCAG
 
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JMFN042E08+           TTGCATCAGCAACAGCTATCCCTATATCAGCCTTCTTTAAAGCTGGAGCATCATTGACAC
JMFS013E03+           TTGCATCAGCAACAGCTATCCCTATATCAGCCTTCTTTAAAGCTGGAGCATCATTGACAC
JMFS051B09+           TGGCATCAGCAACAGCGATTCCTATATCGGCCTTCTTCAAAGCCGGAGCATCATTCACAC
                      ____________________________________________________________
consensus             TTGCATCAGCAACAGCTATCCCTATATCAGCCTTCTTTAAAGCTGGAGCATCATTGACAC
 
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JMFN042E08+           CATCACCAGTCATTCCACAGATATGCTTCCTTGCTTGCAAGCGCTTCACTATCTCATACT
JMFS013E03+           CATCACCAGTCATTCCACAGATATGCTTCCTTGCTTGCAAGCGCTTCACTATCTCATACT
JMFS051B09+           CATCACCAGTCATTCCACAGATGTGTTTTCTTGCTTGTAAGCGCTTCACGATCTCATATT
                      ____________________________________________________________
consensus             CATCACCAGTCATTCCACAGATATGCTTCCTTGCTTGCAAGCGCTTCACTATCTCATACT
 
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JMFN042E08+           TGTGCTCGGGGAAAACACCAGCAAAACCATCTGCCTTCTCTATCAGTTCATCAATAGGTA
JMFS013E03+           TGTGCTCGGGGAAAACACCAGCAAAACCATCTGCCTTCTCTATCAGTTCATCAATAGGTA
JMFS051B09+           TGTGCTCTGGGAAAACACCGGCAAAACCATCAGCCTTCTCAATAAGTTCATCAACCGGTA
JMFS044A10+                                   AACCATCAGCCTTGTCAATAAGTTCATCAACCGGTA
                      ____________________________________________________________
consensus             TGTGCTCGGGGAAAACACCAGCAAAACCATCTGCCTTCTCTATCAGTTCATCAATCGGTA
 
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JMFN042E08+           ATGCAGCAATTGACTCATCCTTACTCTGTCCCAGCAAAGAAGATGAAGGATACATATTTG
JMFS013E03+           ATGCAGCAATTGACTCATCCTTACTCTGTCCCAGCAAAGAAGATGAAGGATACATATTTG
JMFS051B09+           AAGCAGCAATGGATTCATCCTTATCCTGTCCCAACAAAGCTGATGAAGGATACATATTTG
JMFS044A10+           AAGCAGCAATGGATTCATCCTTATCCTGTCCCAACAAAGCTGATGAAGGATACATATTTG
                      ____________________________________________________________
consensus             ATGCAGCAATTGATTCATCCTTATTCTGTCCCAGCAAAGCTGATGAAGGATACATATTTG
 
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JMFN042E08+           TACCCATTCCCAAACGCCGCCC                                      
JMFS013E03+           TACCCATTCCCAAACGCCGCCCGGTTTCTTTTCCAATTGCTAGCTGATCACCAGTAATCA
JMFS051B09+           TTCCCATTCCCAAACGCCGCCCAGTTTCTTTACCAATAGCCAGTTGATCCCCGGTAATCA
JMFS044A10+           TTCCCATTCCCAAACGCCGCCCAGTTTCTTTACCAATAGCCAGTTGATCCCCGGTAATCA
                      ____________________________________________________________
consensus             TTCCCATTCCCAAACGCCGCCCAGTTTCTTTACCAATAGCCAGTTGATCCCCGGTAATCA
 
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JMFS013E03+           TTTTAACATTAACTCCAAGATTCAAAGCCCTCCTGATGGTCTCAGCACT           
JMFS051B09+           TTTTAACATTTACTCCAAGATTTAGAGCCCTCCTAATGGTCTCTGCACTGTCATGCCGAG
JMFS044A10+           TTTTAACATTTACTCCAAGATTTAGAGCCCTCCTAATGGTCTCTGCACTGTCATGCCGAG
                      ____________________________________________________________
consensus             TTTTAACATTTACTCCAAGATTTAGAGCCCTCCTAATGGTCTCTGCACTGTCATGCCGAG
 
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JMFS051B09+           GAGGATCAAACAAAGGCATAAGACCAATGAATTGCCAGGGTCCCCCCGCACTCTCTTTCC
JMFS044A10+           CAGGATCAAACAAAGGCATAAGACCAATGAATTGCCAGGGTCCCCCCGCACTCTCTTTCC
                      ____________________________________________________________
consensus             GAGGATCAAACAAAGGCATAAGACCAATGAATTGCCAGGGTCCCCCCGCACTCTCTTTCC
 
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JMFS051B09+           TTCCATCTGGAACTTCCTGATAAGNNACACCAAGAGACCGAAGCCCACGCT         
JMFS044A10+           TTCCATCTGGAACTTCCTGATAAGCTACACCAAGAGGCCGTAGCCCACGCTCTGCAAACT
                      ____________________________________________________________
consensus             TTCCATCTGGAACTTCCTGATAAGCTACACCAAGAGGCCGTAGCCCACGCTCTGCAAACT
 
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JMFS044A10+           TATCGATCACAGCATGAACCCTGCGCTCTATTTCTGACTTGTTGTGCACGAGATTTAAAA
                      ____________________________________________________________
consensus             TATCGATCACAGCATGAACCCTGCGCTCTATTTCTGACTTGTTGTGCACGAGATTTAAAA
 
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JMFS044A10+           TCTGCTCCGGTGCACCTTTACTGACCCTGTGCATTTTTCCTTGACCATCGAGATATGTAA
                      ____________________________________________________________
consensus             TCTGCTCCGGTGCACCTTTACTGACCCTGTGCATTTTTCCTTGACCATCGAGATATGTAA
 
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JMFS044A10+           GTGCTGTCCGCTTGTCGGTGGGGTTGAAAGGAAGGAAGTGGAGTTCTTGAATACCAGCAC
                      ____________________________________________________________
consensus             GTGCTGTCCGCTTGTCGGTGGGGTTGAAAGGAAGGAAGTGGAGTTCTTGAATACCAGCAC
 
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JMFS044A10+           GTGCCTCCTTTGGATCAGCCAGCATATTATCAATAGCACCATCGATTGCATCTTGGTTTT
                      ____________________________________________________________
consensus             GTGCCTCCTTTGGATCAGCCAGCATATTATCAATAGCACCATCGATTGCATCTTGGTTTT