| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF006D05 | Sequence | 554 | 011775 (19) | ref|XP_009616023.1| | 146 | PREDICTED: uncharacterized protein LOC104108647 [Nicotiana tomentosiformis] | 792 | 009016 (6) | ref|XP_009616023.1| | 259 | PREDICTED: uncharacterized protein LOC104108647 [Nicotiana tomentosiformis] |
| JMFS037F12 | Sequence | 618 | 009016 (6) | ref|XP_006344767.1| | 124 | PREDICTED: uncharacterized protein LOC102580046 [Solanum tuberosum] | |||||
| JMSF009A18 | Sequence | 797 | 009016 (6) | ref|XP_009616023.1| | 263 | PREDICTED: uncharacterized protein LOC104108647 [Nicotiana tomentosiformis] | |||||
| JMSF011J18 | Sequence | 193 | 011775 (19) | ref|XP_008246002.1| | 127 | PREDICTED: uncharacterized protein LOC103344152 [Prunus mume] | 768 | 009016 (6) | ref|XP_009616023.1| | 197 | PREDICTED: uncharacterized protein LOC104108647 [Nicotiana tomentosiformis] |
| JMSF040D20 | Sequence | 428 | 011775 (19) | ref|XP_004230310.1| | 144 | PREDICTED: uncharacterized protein LOC101249681 [Solanum lycopersicum] | 803 | 009016 (6) | ref|XP_009616023.1| | 209 | PREDICTED: uncharacterized protein LOC104108647 [Nicotiana tomentosiformis] |
| JMSF043E11 | Sequence | 397 | 011775 (19) | ref|XP_009783972.1| | 204 | PREDICTED: uncharacterized protein LOC104232454 [Nicotiana sylvestris] | 777 | 009016 (6) | ref|XP_009616023.1| | 230 | PREDICTED: uncharacterized protein LOC104108647 [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
rJMSF040D20+ CTTGAGACAGATGATCTAGTTAA
rJMSF009A18+ TGAGACAGATGATCTAGTTAA
____________________________________________________________
consensus CTTGAGACAGATGATCTAGTTAA
. : . : . : . : . : . :
rJMSF040D20+ GGAGATGTCAGAGGGCTTCACTCCTGATGATACTTTCTTGTTCGGACTACAATCAATGGT
rJMSF009A18+ GGAGATGTCAGAGGGCTTCACTCCTGATGATACTTTCTTGTTCGGACTACAATCAATGGN
rJMSF011J18+ GTCAGAGGGCTTCACTCCTGATGATACTTTCTTGTTCGGACTACAATCAATGGT
rJMFF006D05+ GTCAGAGGGCTTCACTCCTGATGATACTTTCTTGTTCGGACTACAATCAATGGT
rJMSF043E11+ CTACAATCAATGGT
____________________________________________________________
consensus GGAGATGTCAGAGGGCTTCACTCCTGATGATACTTTCTTGTTCGGACTACAATCAATGGT
. : . : . : . : . : . :
rJMSF040D20+ TGACATGGATCATATCCAGGTTCTCGTACACTCCAGGGAGTCTCCTTCGTATGATGGGGA
rJMSF009A18+ TGACATGGATCATATCCAGGTTCTCGTACACTCCAGGGAGTCTCCTTCGTATGATGGGGA
rJMSF011J18+ TGACATGGATCATATCCAGGTTCTCGTACACTCCAGGGAGTCTCCTTCGTATGATGGGGA
rJMFF006D05+ TGACATGGATCATATCCAGGTTCTCGTACACTCCAGGGAGTCTCCTTCGTATGATGGGGA
rJMSF043E11+ TGACATGGATCATATCCANGTTCTCGTACACTCCAGGGAGTCTCCTTCGTATGATGGGGA
____________________________________________________________
consensus TGACATGGATCATATCCAGGTTCTCGTACACTCCAGGGAGTCTCCTTCGTATGATGGGGA
. : . : . : . : . : . :
rJMSF040D20+ TTTTCTTACAAACTCATCTGCAGAGGATGATAAAATTAGTGAATCCTCGGTTACTGACAT
rJMSF009A18+ TTTTCTTACAAACTCATCTGCAGAGGATGATAAAATTAGTGAATCCTCAGTTACTGACAT
rJMSF011J18+ TTTTCTTACAAACTCATCTGCAGAGGATGATAAAATTAGTGAATCCTCGGTTACTGACAT
rJMFF006D05+ TTTTCTTACAAACTCATCTGCAGAGGATGATAAAATTAGTGAATCCTCGGTTACTGACAT
rJMSF043E11+ TTTTCTTACAAACTCATCTGCAGAGGATGATAAAATTAGTGAATCCTCGGTTACTGACAT
____________________________________________________________
consensus TTTTCTTACAAACTCATCTGCAGAGGATGATAAAATTAGTGAATCCTCGGTTACTGACAT
. : . : . : . : . : . :
rJMSF040D20+ GACCCGTTTCATGCCAACATCTCCATCGCCTTCCTCATCGCGTATTGTCAATATCGGGCA
rJMSF009A18+ GACCCGTTTCATGCCAACATCTCCATCGCCTTCCTCATCGCGTATTGTCAATATCGGGCA
rJMSF011J18+ GACCCGTTTCATGCCAACATCTCCATCGCCTTCCTCATCGCGTATTGTCAATATCGGGCA
rJMFF006D05+ GACCCGTTTCATGCCAACATCTCCATCGCCTTCCTCATCGCGTATTGTCAATATCGGGCA
rJMSF043E11+ GACCCGTTTCATGCCAACATCTCCATCGCCTTCCTCATCGCGTATTGTCAATATCGGGCA
____________________________________________________________
consensus GACCCGTTTCATGCCAACATCTCCATCGCCTTCCTCATCGCGTATTGTCAATATCGGGCA
. : . : . : . : . : . :
rJMSF040D20+ GCTTCTGGAATCAGCTCTCGAGGTAGCTGGTCAAGTAGCTGGAACGTTTGTGTCCACTTC
rJMSF009A18+ GCTTCTGGAATCAGCTCTCGAGGTAGCTGGTCAAGTAGCTGGAACGTTTGTGTCCACTTC
rJMSF011J18+ GCTTCTGGAATCAGCTCTCGAGGTAGCTGGTCAAGTAGCTGGAACGTTTGTGTCCACTTC
rJMFF006D05+ GCTTCTGGAATCAGCTCTCGAGGTAGCTGGTCAAGTAGCTGGAACGTTTGTGTCCACTTC
rJMSF043E11+ GCTTCTGGAATCAGCTCTCGAGGTAGCTGGTCAAGTAGCTGGAACGTTTGTGTCCACTTC
JMFS037F12+ TTGTGTCCACTTC
____________________________________________________________
consensus GCTTCTGGAATCAGCTCTCGAGGTAGCTGGTCAAGTAGCTGGAACGTTTGTGTCCACTTC
. : . : . : . : . : . :
rJMSF040D20+ ACCGCTTCCCTATGGTGCCATGGCTAGCCAGTGCGAAACTCTAGGCACAGACACCCGAAA
rJMSF009A18+ ACCGCTTCCCTATGGTGCCATGGCTAGCCAGTGCGAAACTCTAGGCACAGACACCCGAAA
rJMSF011J18+ ACCGCTTCCCTATGGTGCCATGGCTAGCCAGTGCGAAACTCTAGGCACAGACACCCGAAA
rJMFF006D05+ ACCGCTTCCCTATGGTGCCATGGCTAGCCAGTGCGAAACTCTAGGCACAGACACCCGAAA
rJMSF043E11+ ACCGCTTCCCTATGGTGCCATGGCTAGCCAGTGCGAAACTCTAGGCACAGACACCCGAAA
JMFS037F12+ ACCGCTTCCCTATGGTGCCATGGCTAGCCAGTGCGAAACTCTAGGCACAGACACCCGAAA
____________________________________________________________
consensus ACCGCTTCCCTATGGTGCCATGGCTAGCCAGTGCGAAACTCTAGGCACAGACACCCGAAA
. : . : . : . : . : . :
rJMSF040D20+ GAAGCTTTCCAATTGGTTGGCTCACG-AGACCATTATACTAAAGCTGCTGCTGATGTATT
rJMSF009A18+ GAAGCTTTCCAATTGGTTGGCTCACGAAAACCATTATACTAAAGCTGCTGCTGATGTATT
rJMSF011J18+ GAAGCTTTCCAATTGGTTGGCTCACG-AGACCATTATACTAAAGCTGCTGCTGATGTATT
rJMFF006D05+ GAAGCTTTCCAATTGGTTGGCTCACGAAAACCATTATACTAAAGCTGCTGCTGATGTATT
rJMSF043E11+ GAAGCTTTCCAATTGGTTGGCTCACGAAAACCATTATACTAAAGCTGCTGCTGATGTATT
JMFS037F12+ GAAGCTTTCCAATTGGTTGGCTCACGAAAACCATTATACTAAAGCTGCTGCTGATGTATT
____________________________________________________________
consensus GAAGCTTTCCAATTGGTTGGCTCACGAAAACCATTATACTAAAGCTGCTGCTGATGTATT
. : . : . : . : . : . :
rJMSF040D20+ GCTTCCAGCCATTCCTGGAAATGGACTATTAACTGCCAAAAAGACGATCGATGAAGACTC
rJMSF009A18+ GCTTCCAGCCATTCCTGGAAATGGACTATTAACTGCCAAAAAGACGATCGATGAAGACTC
rJMSF011J18+ GCTTCCAGCCATTCCTGGAAATGGACTATTAACTGCCAAAAAGACGATCGATGAAGACTC
rJMFF006D05+ GCTTCCAGCCATTCCTGGAAATGGACTATTAACTGCCAAAAAGACGATCGATGAAGACTC
rJMSF043E11+ GCTTCCAGCCATTCCTGGAAATGGACTATTAACTGCCAAAAAGACGATCGATGAAGACTC
JMFS037F12+ GCTTCCAGCCATTCCTGGAAATGGACTATTAACTGCCAAAAAGACGATCGATGAAGACTC
____________________________________________________________
consensus GCTTCCAGCCATTCCTGGAAATGGACTATTAACTGCCAAAAAGACGATCGATGAAGACTC
. : . : . : . : . : . :
rJMSF040D20+ AACCCTCCAGCAGGGTGTAATGGTGCCGAGAGAGCCATGGCTAGCCATTTGNANACCTCC
rJMSF009A18+ AACCCTCCAGCAGGGTGTAATGGTGCCGAGAGAGCCATGGCTAGCCATTTGNNNACCTCC
rJMSF011J18+ AACCCTCCAGCAGGGTGTAATGGTGCCGAGAGAGCCATGGCTAGCCATTTGNNTACCTCC
rJMFF006D05+ AACCCTCCAGCAGGGTGTAATGGTGCCGAGAGAGCCATGGCTAGCCATTAGGCTACCTCC
rJMSF043E11+ AACCCTCCAGCAGGGTGTAATGGTGCCGAGAGAGCCATGGCTAGCCATTTGNNTACCNCC
JMFS037F12+ AACCCTCCAGCAGGGTGTAATGGTGCCGAGAGAGCCATGGCTAGCCATTAGGCTACCTCC
____________________________________________________________
consensus AACCCTCCAGCAGGGTGTAATGGTGCCGAGAGAGCCATGGCTAGCCATTTGGCTACCTCC
. : . : . : . : . : . :
rJMSF040D20+ GGCCAGTCCCTTCGATAACTTCCTCAGAGCAGCTCGACGTTAAGAGGAGGTTAGTTGGTG
rJMSF009A18+ GGCCAGTCCCTTCGATAACTTCCTCAGAGCAGCTCGACGTTAAGAGGAGGTTAGTTGGTG
rJMSF011J18+ GGCCAGTCCCTTCGATAACTTCCTCAGAGCAGCTCGACGTTAAGAGGAGGTTAGTTGGTG
rJMFF006D05+ GGCCAGTCCCTTCGATAACTTCCTCAGAGCAGCTCGACGTTAAGAGGAGGTTAGTTGGTG
rJMSF043E11+ GGCCAGTCCCTTCGATAACTTCCTCAGAGCAGCTCGACGTTAAGAGGAGGTTAGTTGGTG
JMFS037F12+ GGCCAGTCCCTTCGATAACTTCCTCAGAGCAGCTCGACGTTAAGAGGAGGTTAGTTGGTG
____________________________________________________________
consensus GGCCAGTCCCTTCGATAACTTCCTCAGAGCAGCTCGACGTTAAGAGGAGGTTAGTTGGTG
. : . : . : . : . : . :
rJMSF040D20+ GGGCCAGTGGCCATCGCCCATGGTTGTGAATAGCAGACTAGGAGTTTGAGGTTTGCTTTA
rJMSF009A18+ GGGCCAGTGGCCATCGCCCATGGTTGTGAATAGCAGACTAGGAGTTTGAGGTTTGCTTTA
rJMSF011J18+ GGGCCAGTGGCCATCGCCCATGGTTGTGAATAGCAGACTAGGAGTTTGAGGTTTGCTTTA
rJMFF006D05+ GGGCCAGTGGCCATCGCCCATGGTTGTGAATAGCAGACTAGGAGTTTGAGGTTTGCTTTA
rJMSF043E11+ GGGCCAGTGGCCATCGCCCATGGTTGTGAATAGCAGACTAGGAGTTTGAGGTTTGCTTTA
JMFS037F12+ GGGCCAGTGGCCATCGCCCATGGTTGTGAATAGCAGACTAGGAGTTTGAGGTTTGCTTTA
____________________________________________________________
consensus GGGCCAGTGGCCATCGCCCATGGTTGTGAATAGCAGACTAGGAGTTTGAGGTTTGCTTTA
. : . : . : . : . : . :
rJMSF040D20+ TGAATTGTATGTTTGTTTTTACTACTTAAGTGGGTTAGCTTTGGCTTATTTTCTGCACCC
rJMSF009A18+ TGAATTGTATGTTTGTTTTTACTACTTAAGTGGGTTAGCTTTGGCTTATTTTCTGCACCC
rJMSF011J18+ TGAATTGTATGTTTGTTTTTACTACTTAAGTGGGTTAGCTTTGGCTTATTTTCTGCACCC
rJMFF006D05+ TGAATTGTATGTTTGTTTTTACTACTTAAGTGGGTTAGCTTTGGCTTATTTTCTGCACCC
rJMSF043E11+ TGAATTGTATGTTTGTTTTTACTACTTAAGTGGGTTAGCTTTGGCTTATTTTCTGCACCC
JMFS037F12+ TGAATTGTATGTTTGTTTTTACTACTTAAGTGGGTTAGCTTTGGCTTATTTTCTGCACCC
____________________________________________________________
consensus TGAATTGTATGTTTGTTTTTACTACTTAAGTGGGTTAGCTTTGGCTTATTTTCTGCACCC
. : . : . : . : . : . :
rJMSF009A18+ AACTTGTGAAAACCCTAGTACTAGCTTTCCATGATTGTGGAGTAATTAGGAAAAAA
rJMSF011J18+ AACTTGTGAAAACCCTAGTACTAGCTTT-CATGATTGTGGAGTAATTAGGAAAAAA
rJMFF006D05+ AACTTGTGAAAA-CCTAGTACTAGCTTT-CATGATTGTGGAGTAATTAGGAAAAAAAGAT
rJMSF043E11+ AACTTGTGAAAA-CCTAGTACTAGCTTT-CATGATTGTGGAGTAATTAGGAAAAAAAGAT
JMFS037F12+ AACTTGTGAAAA-CCTAGTACTAGCTTT-CATGATTGTGGAGTAATTAGGAAAAAAAGAT
____________________________________________________________
consensus AACTTGTGAAAA-CCTAGTACTAGCTTT-CATGATTGTGGAGTAATTAGGAAAAAAAGAT
. : . : . : . : . : . :
rJMFF006D05+ AGTTTATCATCAATCTA
rJMSF043E11+ AGTTTATCATCAATCTATCATTAAATCACTGGAAATTAGGAATGG
JMFS037F12+ AGTTTATCATCAATCTATCATTAAATCACTGGAAATTAGGAATGGTGTATGTGTTTTGAG
____________________________________________________________
consensus AGTTTATCATCAATCTATCATTAAATCACTGGAAATTAGGAATGGTGTATGTGTTTTGAG
. : . : . : . : . : . :
JMFS037F12+ TAAAGAAAGTAGTAACTTCCATTGCAAAAAAAAAAAAAAAAAAACTCGAGACTAGTTCTC
____________________________________________________________
consensus TAAAGAAAGTAGTAACTTCCATTGCAAAAAAAAAAAAAAAAAAACTCGAGACTAGTTCTC