Contig 009013:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS029F08Sequence602009013 (2)ref|XP_011089653.1|7e-13PREDICTED: ATP-dependent RNA helicase SUV3 homolog, mitochondrial [Sesamum indi
JMFS031D05Sequence478009013 (2)ref|XP_009626871.1|5e-16PREDICTED: ATP-dependent RNA helicase SUPV3L1, mitochondrial-like [Nicotiana to

Alignment

This contig is upended


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JMFS029F08+                                                                     AT
                      ____________________________________________________________
consensus                                                                       AT
 
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JMFS031D05+                                                      GAGCTCCCTATAAATTT
JMFS029F08+           CCCAATCTCCCCGGGTTTGCTTCTCCCCCTTGCTGGCATCTCTGAGCTCCCTATAAATTT
                      ____________________________________________________________
consensus             CCCAATCTCCCCGGGTTTGCTTCTCCCCCTTGCTGGCATCTCTGAGCTCCCTATAAATTT
 
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JMFS031D05+           CCACTGGATCAC-GGCCCGCTATATGAGCAAAATCCAATCTTTTCTCACACCCAACCTTC
JMFS029F08+           CCACTGGATCACGGGCCCGCTATATGAGCAAAATCCAATCTTTTCTCACACCCAACCTTC
                      ____________________________________________________________
consensus             CCACTGGATCACGGGCCCGCTATATGAGCAAAATCCAATCTTTTCTCACACCCAACCTTC
 
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JMFS031D05+           CCATCTTCATTCTCCTCCTTCCCCAACTCCAGATTACCAGCTTCACCCTCCACGTTTTCC
JMFS029F08+           CCATCTTCATTCTCCTCCTTCCCCAACTCCAGATTACCAGCTTCACCCTCCACGTTTTCC
                      ____________________________________________________________
consensus             CCATCTTCATTCTCCTCCTTCCCCAACTCCAGATTACCAGCTTCACCCTCCACGTTTTCC
 
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JMFS031D05+           ACTGGACTCGAACAAGAACCATCATTTCCACCCAGCGCAGAAAAATGGCGTCCACTGAAA
JMFS029F08+           ACTGGACTCGAACAAGAACCATCATTTCCACCCAGCGCAGAAAAATGGCGTCCACTGAAA
                      ____________________________________________________________
consensus             ACTGGACTCGAACAAGAACCATCATTTCCACCCAGCGCAGAAAAATGGCGTCCACTGAAA
 
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JMFS031D05+           CTTAAAAATCCAAACTTTGTGAATTGCGCGAAGTGGGTGTGCAAGAACTGAGGCTGGGGT
JMFS029F08+           CTTAAAAATCCAAACTTTGTGAATTGCGCGAAGTGGGTGTGCAAGAACTGAGGCTGGGGT
                      ____________________________________________________________
consensus             CTTAAAAATCCAAACTTTGTGAATTGCGCGAAGTGGGTGTGCAAGAACTGAGGCTGGGGT
 
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JMFS031D05+           GGTAATCTGGGCTCATGGAAGGGGTAATCTTGAAATTTCCTGGATTCTGGAGTGCGGGCA
JMFS029F08+           GGTAATCTGGGCTCATGGAAGGGGTAATCTTGAAATTTCCTGGATTCTGGAGTGCGGGCA
                      ____________________________________________________________
consensus             GGTAATCTGGGCTCATGGAAGGGGTAATCTTGAAATTTCCTGGATTCTGGAGTGCGGGCA
 
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JMFS031D05+           TGGAGGAAACGGTTTGAGCAGGGAAAAAGTGTGGCCCTAAAGAAGTTTCTCTTGGAAGAG
JMFS029F08+           TGGAGGAAACGGTTTGAGCAGGGAAAAAGTGTGGCCCTAAAGAAGTTTCTCTTGGAAGAG
                      ____________________________________________________________
consensus             TGGAGGAAACGGTTTGAGCAGGGAAAAAGTGTGGCCCTAAAGAAGTTTCTCTTGGAAGAG
 
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JMFS031D05+           GAACAGAGATGGAGGAGGGGTCTTGCCATTGACGGAGAAATAGTATTGAACTAGAAATGC
JMFS029F08+           GAACAGAGATGGAGGAGGGGTCTTGCCATTGACGGAGAAATAGTATTGAACTAGAAATGC
                      ____________________________________________________________
consensus             GAACAGAGATGGAGGAGGGGTCTTGCCATTGACGGAGAAATAGTATTGAACTAGAAATGC
 
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JMFS031D05+           AGTAATATGCATAGAAGCGAAATCATATGCAGGTATACAGGT                  
JMFS029F08+           AGTAATATGCATAGAAGCGAAATCATATGCAGGTATACAGGTGAAATTAAATGGGAAAGA
                      ____________________________________________________________
consensus             AGTAATATGCATAGAAGCGAAATCATATGCAGGTATACAGGTGAAATTAAATGGGAAAGA
 
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JMFS029F08+           GAAGCATACCTGAGATTCTGAGAATGAGAAAGAGGGAAGAGAGAATGGAGGGAAAGGGAC
                      ____________________________________________________________
consensus             GAAGCATACCTGAGATTCTGAGAATGAGAAAGAGGGAAGAGAGAATGGAGGGAAAGGGAC