Contig 009012:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMCP016E05Sequence610009012 (2)gb|ACU21482.1|5e-132unknown [Glycine max]
JMFS029D05Sequence617009012 (2)sp|P27598.1|PHSL_IPOBA2e-135RecName: Full=Alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplast

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMCP016E05+                                          ATCAACCTTCTCTTGGCATTCTATGTAA
                      ____________________________________________________________
consensus                                             ATCAACCTTCTCTTGGCATTCTATGTAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMCP016E05+          CTAGGGAAGTCCTTGCCCACGAGGAAATAGTCTCCACGACCAAAGCCTTCATTTCCCTCC
                      ____________________________________________________________
consensus             CTAGGGAAGTCCTTGCCCACGAGGAAATAGTCTCCACGACCAAAGCCTTCATTTCCCTCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMCP016E05+          AAAGATCCAAGAAGCTCATCATAGGTATTGGAGCCAAAAACACCACTCTTTATGAATTCC
                      ____________________________________________________________
consensus             AAAGATCCAAGAAGCTCATCATAGGTATTGGAGCCAAAAACACCACTCTTTATGAATTCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMCP016E05+          TTGACTTCCTCAAAACGTTCGTCTGGTACAAACTTTCCCTCAGTTCTTTCTTTCCGAAGC
                      ____________________________________________________________
consensus             TTGACTTCCTCAAAACGTTCGTCTGGTACAAACTTTCCCTCAGTTCTTTCTTTCCGAAGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMCP016E05+          CCTGCAATCTCATGAGCTTCAGCCCCAAAGAGAAAGAAGTTTTCCTCTCCAACCTCTTGC
                      ____________________________________________________________
consensus             CCTGCAATCTCATGAGCTTCAGCCCCAAAGAGAAAGAAGTTTTCCTCTCCAACCTCTTGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMCP016E05+          CTTATCTCAACATTGGCTCCATCTAAGGTCCCGATTAAGAGGCAACCATTCATGGCAAAT
                      ____________________________________________________________
consensus             CTTATCTCAACATTGGCTCCATCTAAGGTCCCGATTAAGAGGCAACCATTCATGGCAAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMCP016E05+          TTCATATTGCTGGTTCCACTGGCCTCCATTCCGGCAGTACTGATATGTTGTGAAAGTTCA
                      ____________________________________________________________
consensus             TTCATATTGCTGGTTCCACTGGCCTCCATTCCGGCAGTACTGATATGTTGTGAAAGTTCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMCP016E05+          CTAGCTGGAATCAACAGTTCTGCAACACTGACATTGTAATTGGGGACAAAAATAACCTTC
JMFS029D05+                                                      GGACAAAAATAACCTCN
                      ____________________________________________________________
consensus             CTAGCTGGAATCAACAGTTCTGCAACACTGACATTGTAATTGGGGACAAAAATAACCTTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMCP016E05+          AACAAATCACCGATCTCAGGATCATGGTTTATGGTGGCTCCAACATCTGTTATGAATTTT
JMFS029D05+           AACAAATCACCGATCTCAGGATCATGGTTTATGGTGGCTCCAACATCTGTTATGAATTTT
                      ____________________________________________________________
consensus             AACAAATCACCGATCTCAGGATCATGGTTTATGGTGGCTCCAACATCTGTTATGAATTTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMCP016E05+          ACGATCCTTTTAGCTTGAACATATGTAGCAAAAGCTTTTCCTCCAAATATGCATACTCGA
JMFS029D05+           ACGATCCTTTTAGCTTGAACATATGTAGCAAAAGCTTTTCCTCCAAATATGCATACTCGA
                      ____________________________________________________________
consensus             ACGATCCTTTTAGCTTGAACATATGTAGCAAAAGCTTTTCCTCCAAATATGCATACTCGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMCP016E05+          GGAACAAACTTAGCTTCTCTTTCTGCTGCGCTCATTTCTTTC                  
JMFS029D05+           GGAACAAACTTAGCTTCTCTTTCTGCTGCGCTCATTTCTTTCATCTGCTTGTAGCGATAA
                      ____________________________________________________________
consensus             GGAACAAACTTAGCTTCTCTTTCTGCTGCGCTCATTTCTTTCATCTGCTTGTAGCGATAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS029D05+           ACAATTCCCAAGATATTCAAGAGTTGGCGCTTGTATTCATGAATTCGTTTTACCTGGATA
                      ____________________________________________________________
consensus             ACAATTCCCAAGATATTCAAGAGTTGGCGCTTGTATTCATGAATTCGTTTTACCTGGATA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS029D05+           TCAAACATTGCATTGGGGCTGACTGAATACCCTGTCGTTTCTTTTAGGAATGAGGCAACC
                      ____________________________________________________________
consensus             TCAAACATTGCATTGGGGCTGACTGAATACCCTGTCGTTTCTTTTAGGAATGAGGCAACC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS029D05+           TTAACTTTGTTGCTTCTTTTTGCAGCCCTCCACTCTTTTTGAAGATCTTCATTATCTGCA
                      ____________________________________________________________
consensus             TTAACTTTGTTGCTTCTTTTTGCAGCCCTCCACTCTTTTTGAAGATCTTCATTATCTGCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS029D05+           AACTTGCGCAGTTCTGCCAACTTTTCTGTGTTTAGGACCCAGTCCTCTGTACCAATCCAC
                      ____________________________________________________________
consensus             AACTTGCGCAGTTCTGCCAACTTTTCTGTGTTTAGGACCCAGTCCTCTGTACCAATCCAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS029D05+           TTAGTAATGATATTACTTAGAGCAGGATTACAAAATCGGATCCATCTTCTTGGCGTCACA
                      ____________________________________________________________
consensus             TTAGTAATGATATTACTTAGAGCAGGATTACAAAATCGGATCCATCTTCTTGGCGTCACA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS029D05+           CCATTTGTTTTGTTTTGAAATTTCTCAGGCCAAAGCTGGTAAAAGTCATTAAAAACATCT
                      ____________________________________________________________
consensus             CCATTTGTTTTGTTTTGAAATTTCTCAGGCCAAAGCTGGTAAAAGTCATTAAAAACATCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS029D05+           TCCTTCACTATATCACTATGAATCTCGGCAACTCCATTTACAGCATGACCACCAACAACA
                      ____________________________________________________________
consensus             TCCTTCACTATATCACTATGAATCTCGGCAACTCCATTTACAGCATGACCACCAACAACA