Contig 009010:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS027D01Sequence620009010 (2)emb|CDY69447.1|6e-04BnaA09g51600D [Brassica napus]
JMFS027G02Sequence553009010 (2)emb|CDY69447.1|8e-05BnaA09g51600D [Brassica napus]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS027D01+ TGATGGGTATACATTTCAGT
                      ____________________________________________________________
consensus TGATGGGTATACATTTCAGT
 
. : . : . : . : . : . :
JMFS027G02+ ACCTTG
JMFS027D01+ ACCCAGTCAAGAAGCATTGTGCATGTTTTCAATAAACAATTTGTGATATTTTTTACCTTG
                      ____________________________________________________________
consensus ACCCAGTCAAGAAGCATTGTGCATGTTTTCAATAAACAATTTGTGATATTTTTTACCTTG
 
. : . : . : . : . : . :
JMFS027G02+ ATAAGTCCAGTCTTCTTATCCAATTCATACTTCACCTTACCCCCCTTGCTGATCTCAATT
JMFS027D01+ ATAAGTCCAGTCTTCTTATCCAATTCATACTTCACCTTACCCCCCTTGCTGATCTCAATT
                      ____________________________________________________________
consensus ATAAGTCCAGTCTTCTTATCCAATTCATACTTCACCTTACCCCCCTTGCTGATCTCAATT
 
. : . : . : . : . : . :
JMFS027G02+ ACCTGCATAGATATAGAAAAACTAAACCTGAAATCCTTGTCCACACAAAAATAAACCTGA
JMFS027D01+ ACCTGCATAGATATAGAAAAACTAAACCTGAAATCCTTGTCCACACAAAAATAAACCTGA
                      ____________________________________________________________
consensus ACCTGCATAGATATAGAAAAACTAAACCTGAAATCCTTGTCCACACAAAAATAAACCTGA
 
. : . : . : . : . : . :
JMFS027G02+ TACCAAATTAATCCATTAAATATCATGCTATTCCCCGAGTATAACACAAGTAAATCCATA
JMFS027D01+ TACCAAATTAATCCATTAAATATCATGCTATTCCCCGAGTATAACACAAGTAAATCCATA
                      ____________________________________________________________
consensus TACCAAATTAATCCATTAAATATCATGCTATTCCCCGAGTATAACACAAGTAAATCCATA
 
. : . : . : . : . : . :
JMFS027G02+ TGGTCAAGGTCAATGAACACTTGAGCATTCAAATGGGAGGGATGGAGGGTAAGACAATAT
JMFS027D01+ TGGTCAAGGTCAATGAACACTTGAGCATTCAAATGGGAGGGATGGAGGGTAAGACAATAT
                      ____________________________________________________________
consensus TGGTCAAGGTCAATGAACACTTGAGCATTCAAATGGGAGGGATGGAGGGTAAGACAATAT
 
. : . : . : . : . : . :
JMFS027G02+ CAACATTTTTTTTTCCAAATTTCTGATGGATTTTCTTGAGGGTTCAAATAGGATTAGCTC
JMFS027D01+ CAACATTTTTTTTTCCAAATTTCTGATGGATTTTCTTGAGGGTTCAAATAGGATTAGCTC
                      ____________________________________________________________
consensus CAACATTTTTTTTTCCAAATTTCTGATGGATTTTCTTGAGGGTTCAAATAGGATTAGCTC
 
. : . : . : . : . : . :
JMFS027G02+ ATTTGGTTGTTGCATATAAATGGTTATAAGACGTATATGTTTTTTTACATTAAATGAAAA
JMFS027D01+ ATTTGGTTGTTGCATATAAATGGTTATAAGACGTATATGTTTTTTTACATTAAATGAAAA
                      ____________________________________________________________
consensus ATTTGGTTGTTGCATATAAATGGTTATAAGACGTATATGTTTTTTTACATTAAATGAAAA
 
. : . : . : . : . : . :
JMFS027G02+ AATTTAACGGAGTTCAAAGCAGTGGGATATGATTTACCGCATAATAAGAGTCCTAACTAA
JMFS027D01+ AATTTAACGGAGTTCAAAGCAGTGGGATATGATTTACCGCATAATAAGAGTCCTAACTAA
                      ____________________________________________________________
consensus AATTTAACGGAGTTCAAAGCAGTGGGATATGATTTACCGCATAATAAGAGTCCTAACTAA
 
. : . : . : . : . : . :
JMFS027G02+ ATTTCTAAAATGAACAAATTGAAAATTCAGAAGGAACATTGTAAAAGTTAAGTAATCTGA
JMFS027D01+ ATTTCTAAAATGAACAAATTGAAAATTCAGAAGGAACATTGTAAAAGTTAAGTAATCTGA
                      ____________________________________________________________
consensus ATTTCTAAAATGAACAAATTGAAAATTCAGAAGGAACATTGTAAAAGTTAAGTAATCTGA
 
. : . : . : . : . : . :
JMFS027G02+ AAGATTTGAGCAAAGTGAATGCTTACCACATT
JMFS027D01+ AAGATTTGAGCAAAGTGAATGCTTACCACATTGAAAACCTTTGGAGCTTCAGGCCCTGGA
                      ____________________________________________________________
consensus AAGATTTGAGCAAAGTGAATGCTTACCACATTGAAAACCTTTGGAGCTTCAGGCCCTGGA