Contig 009007:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN005J20Sequence627009007 (4)
JMFS025C11Sequence600009007 (4)ref|XP_006346139.1|8e-23PREDICTED: axoneme-associated protein mst101(2)-like [Solanum tuberosum]
JMSF014M23Sequence237010464 (3)807009007 (4)emb|CBI39729.3|3e-27unnamed protein product [Vitis vinifera]
JMSF029N16Sequence656013413 (3)710009007 (4)ref|XP_010675923.1|5e-27PREDICTED: glutamic acid-rich protein [Beta vulgaris subsp. vulgaris]

Alignment

This contig is upended


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rJMSF029N16-                                                               ATATTAT
                      ____________________________________________________________
consensus                                                                  ATATTAT
 
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rJMSF029N16-          CACCAGNTATCTTTGCCACCTTTCTCTACTCTACTGCAGGATATGAGTATATGTTGCAGC
                      ____________________________________________________________
consensus             CACCAGNTATCTTTGCCACCTTTCTCTACTCTACTGCAGGATATGAGTATATGTTGCAGC
 
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rJMSF029N16-          GAAAATACAGCAGCAAGAGATCCCAAGGAAGAAAAGGAAAGAAAAACACAGCTAGTAAAC
                      ____________________________________________________________
consensus             GAAAATACAGCAGCAAGAGATCCCAAGGAAGAAAAGGAAAGAAAAACACAGCTAGTAAAC
 
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rJMSF029N16-          AAGATCCTACAAATTTTTGTTACAGAGAAAGCAGCTTTAATCCTTGCAGCACAGCTTAAG
rJMSF014M23-                     AATTTTTGTTACAGAGAAAGCAGCTTTAATCCTTGCAGCACAGCTTAAG
                      ____________________________________________________________
consensus             AAGATCCTACAAATTTTTGTTACAGAGAAAGCAGCTTTAATCCTTGCAGCACAGCTTAAG
 
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rJMSF029N16-          CACTACTACCTCTCAAATCCCCTAGTCTTTTACAGGTGAATGGAATAGCAATTAGGAAAT
rJMSF014M23-          CACTACTACCTCTCAAATCCCCTAGTCTTTTACAGGTGAATGGAATAGCAATTAGGAAAT
                      ____________________________________________________________
consensus             CACTACTACCTCTCAAATCCCCTAGTCTTTTACAGGTGAATGGAATAGCAATTAGGAAAT
 
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rJMSF029N16-          TATAGTTGGCTTAATTTAGGAATGGACAGACAACATTGCACAGCTAAATGAGAAATGACG
rJMSF014M23-          TATAGTTGGCTTAATTTAGGAATGGACAGACAACATTGCACAGCTAAATGAGAAATGACG
                      ____________________________________________________________
consensus             TATAGTTGGCTTAATTTAGGAATGGACAGACAACATTGCACAGCTAAATGAGAAATGACG
 
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rJMSF029N16-          GGTGTGGAGGCACATATCCACTCTGTTCAAGTAGTATCTACACCTTGGCTAGAAGGCTGT
rJMSF014M23-          GGTGTGGAGGCACATATCCACTCTGTTCAAGTAGTATCTACACCTTGGCTAGAAGGCTGT
                      ____________________________________________________________
consensus             GGTGTGGAGGCACATATCCACTCTGTTCAAGTAGTATCTACACCTTGGCTAGAAGGCTGT
 
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rJMSF029N16-          CTATCATCTTTTACAGCGCCGCCTTCATCTTCCTCGTCTGCTTCTGCTAGTCTCGTAAGC
rJMSF014M23-          CTATCATCTTTTACAGCGCCGCCTTCATCTTCCTCGTCTGCTTCTGCTAGTCTCGTAAGC
                      ____________________________________________________________
consensus             CTATCATCTTTTACAGCGCCGCCTTCATCTTCCTCGTCTGCTTCTGCTAGTCTCGTAAGC
 
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rJMSF029N16-          TCATCCTGGATCATCTCCTTTATAGATGCTTTTCTTGCCTTAAGTTCTGTATTGAATTGC
rJMSF014M23-          TCATCCTGGATCATCTCCTTTATAGATGCTTTTCTTGCCTTAAGTTCTGTATTGAATTGC
                      ____________________________________________________________
consensus             TCATCCTGGATCATCTCCTTTATAGATGCTTTTCTTGCCTTAAGTTCTGTATTGAATTGC
 
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rJMSF029N16-          TTAGCCAATTGCTTTACAACATCGGTGAATGTGGCCGTGTTGAAATCAACTTCTTTAAGG
rJMSF014M23-          TTAGCCAATTGCTTTACAACATCGGTGAATGTGGCCGTGTTGAAATCAACTTCTTTAAGG
                      ____________________________________________________________
consensus             TTAGCCAATTGCTTTACAACATCGGTGAATGTGGCCGTGTTGAAATCAACTTCTTTAAGG
 
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rJMSF029N16-          ATTTCACATATTGCTTCTTTCAGCTCATCATCAGTTGGCTTTAATTTTTCCTCTTTGGGT
rJMSF014M23-          ATTTCACATATTGCTTCTTTCAGCTCATCATCAGTTGGCTTTAATTTTTCCTCTTTGGGT
                      ____________________________________________________________
consensus             ATTTCACATATTGCTTCTTTCAGCTCATCATCAGTTGGCTTTAATTTTTCCTCTTTGGGT
 
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rJMSF029N16-          TGCTCTTTACCTTTCACAGTTTTTTTCCCTGTGCTTTCCTTGGAAGCAGACTTCTTTGGA
rJMSF014M23-          TGCTCTTTACCTTTCACAGTTTTTTTCCCTGTGCTTTCCTTGGAAGCAGACTTCTTTGGA
                      ____________________________________________________________
consensus             TGCTCTTTACCTTTCACAGTTTTTTTCCCTGTGCTTTCCTTGGAAGCAGACTTCTTTGGA
 
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rJMSF029N16-          GTTGAGGACTTAACTTTTTTAACTTCAGTGTTTTTCTTCCTTG                 
rJMSF014M23-          GTTGAGGACTTAACTTTTTTAACTTCAGTGTTTTTCTTCCTTGAGGACACTTTTGAACTT
                      ____________________________________________________________
consensus             GTTGAGGACTTAACTTTTTTAACTTCAGTGTTTTTCTTCCTTGAGGACACTTTTGAACTT
 
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rJMSF014M23-          TCATCATTGCCATCGCTAACCTTAGATTGACTTGATGTTTTGCTAGGAGTCTTTTTAGGA
JMFN005J20+                               CTTAGATTGACTTGATGTTNTGCTAGGAGTCTTTTTAGGA
                      ____________________________________________________________
consensus             TCATCATTGCCATCGCTAACCTTAGATTGACTTGATGTTTTGCTAGGAGTCTTTTTAGGA
 
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rJMSF014M23-          GTTGCAACACTCTTCTTAGATTTTCCAGCAGGTTCCTTCTTTGACGAAGTTTTCTTAGAA
JMFN005J20+           GTTGCAACACTCTTCTTAGATTTTCCAGCAGGTTCCTTCTTTGACGAAGTTTTCTTAGAA
                      ____________________________________________________________
consensus             GTTGCAACACTCTTCTTAGATTTTCCAGCAGGTTCCTTCTTTGACGAAGTTTTCTTAGAA
 
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rJMSF014M23-          GTTTCTTTTTGTTTAGGCTTTTCCTCCTCCGATTCATCTTTAGATTCCTTCTTTGACGAA
JMFN005J20+           GTTTCTTTTTGTTTAGGCTTTTCCTCCTCCGATTCATCTTTAGATTCCTTCTTTGACGAA
                      ____________________________________________________________
consensus             GTTTCTTTTTGTTTAGGCTTTTCCTCCTCCGATTCATCTTTAGATTCCTTCTTTGACGAA
 
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rJMSF014M23-          GATTTCTTAAAAGTCTCTTTTCGTTTA                                 
JMFN005J20+           GATTTCTTAGAAGTCTCTTTTCGTTTAGGCTTTTCCTCCTCAGATTCATCTTTAGATTCC
JMFS025C11+             TTTCTTAGAAGTCTCTTTTCGTTTAGGCTTTTCCTCCTCAGATTCATCTTTAGATTCC
                      ____________________________________________________________
consensus             GATTTCTTAGAAGTCTCTTTTCGTTTAGGCTTTTCCTCCTCAGATTCATCTTTAGATTCC
 
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JMFN005J20+           TTCTTTGACGAAGATTTCTTAGAAGTCTCTTTTTGTTTAGGCTTTTCCTCCTCAGCTTCA
JMFS025C11+           TTCTTTGACGAAGATTTCTTAGAAGTCTCTTTTTGTTTAGGCTTTTCCTCCTCAGCTTCA
                      ____________________________________________________________
consensus             TTCTTTGACGAAGATTTCTTAGAAGTCTCTTTTTGTTTAGGCTTTTCCTCCTCAGCTTCA
 
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JMFN005J20+           TCTTTAGGTTCCTTCTTTGATGTTGACTTCTTTGAACTTCGTTTTTCTTTTTTCTTTTCC
JMFS025C11+           TCTTTAGGTTCCTTCTTTGATGTTGACTTCTTTGAACTTCGTTTTTCTTTTTTCTTTTCC
                      ____________________________________________________________
consensus             TCTTTAGGTTCCTTCTTTGATGTTGACTTCTTTGAACTTCGTTTTTCTTTTTTCTTTTCC
 
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JMFN005J20+           TCCTCGGACTCGTCTTCAGATTCATTGTTCTCGTCGCTTTCAGCATGCTCTGAAATCTCA
JMFS025C11+           TCCTCGGACTCGTCTTCAGATTCATTGTTCTCGTCGCTTTCAGCATGCTCTGAAATCTCA
                      ____________________________________________________________
consensus             TCCTCGGACTCGTCTTCAGATTCATTGTTCTCGTCGCTTTCAGCATGCTCTGAAATCTCA
 
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JMFN005J20+           TCTTCTGATTTGTCAGGACCACCATTTGCTTTTGTTTCTTCGTGTTCTTCTTCTGATTCT
JMFS025C11+           TCTTCTGATTTGTCAGGACCACCATTTGCTTTTGTTTCTTCGTGTTCTTCTTCTGATTCT
                      ____________________________________________________________
consensus             TCTTCTGATTTGTCAGGACCACCATTTGCTTTTGTTTCTTCGTGTTCTTCTTCTGATTCT
 
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JMFN005J20+           TCCTCCGACCCATCTTCAGATTCATGTGTATTCTTCTTCTCACCCTTTTTAGATGCAGAT
JMFS025C11+           TCCTCCGACCCATCTTCAGATTCATGTGTATTCTTCTTCTCACCCTTTTTAGATGCAGAT
                      ____________________________________________________________
consensus             TCCTCCGACCCATCTTCAGATTCATGTGTATTCTTCTTCTCACCCTTTTTAGATGCAGAT
 
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JMFN005J20+           GAAGTCCTCTGTCTCTTAGCTGAGCCTTTCGCATTTCCAGATGCTGATGATCCACTTTTA
JMFS025C11+           GAAGTCCTCTGTCTCTTAGCTGAGCCTTTCGCATTTCCAGATGCTGATGATCCACTTTTA
                      ____________________________________________________________
consensus             GAAGTCCTCTGTCTCTTAGCTGAGCCTTTCGCATTTCCAGATGCTGATGATCCACTTTTA
 
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JMFN005J20+           TTGCTAACCCTCTTACGTTTGCCCTTACTTGCCTG                         
JMFS025C11+           TTGCTAACCCTCTTACGTTTGCCCTTACTTGCCTGTTCTTTCTCAGCAAGCAACTCGGAA
                      ____________________________________________________________
consensus             TTGCTAACCCTCTTACGTTTGCCCTTACTTGCCTGTTCTTTCTCAGCAAGCAACTCGGAA
 
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JMFS025C11+           GTTGTAGCTTGTGGAGCCTCCAAAAAGTCCATCAACTTTACAATTACATCTTCCTTCCTC
                      ____________________________________________________________
consensus             GTTGTAGCTTGTGGAGCCTCCAAAAAGTCCATCAACTTTACAATTACATCTTCCTTCCTC
 
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JMFS025C11+           GATGTAGCCTTGGTAACAGGTATATCAAGTACATCGCAAAATTCCAATAACTTCTCTCTC
                      ____________________________________________________________
consensus             GATGTAGCCTTGGTAACAGGTATATCAAGTACATCGCAAAATTCCAATAACTTCTCTCTC