Contig 009005:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF026P22Sequence576009005 (7)gb|AFQ00710.1|7e-85pyrophosphate-energized vacuolar membrane proteon pump 1 [Ipomoea batatas]733004749 (5)gb|ABK94904.1|7e-76unknown [Populus trichocarpa]
JMFS021G05Sequence638009005 (7)gb|AFQ00710.1|5e-103pyrophosphate-energized vacuolar membrane proteon pump 1 [Ipomoea batatas]
JMFS088E10Sequence662009005 (7)gb|AFQ00710.1|5e-115pyrophosphate-energized vacuolar membrane proteon pump 1 [Ipomoea batatas]
JMFS095C02Sequence616009005 (7)gb|AFQ00710.1|3e-89pyrophosphate-energized vacuolar membrane proteon pump 1 [Ipomoea batatas]
JMFS115F05Sequence619009005 (7)gb|AFQ00710.1|4e-100pyrophosphate-energized vacuolar membrane proteon pump 1 [Ipomoea batatas]
JMFS168B05Sequence622009005 (7)gb|AFQ00710.1|2e-101pyrophosphate-energized vacuolar membrane proteon pump 1 [Ipomoea batatas]
JMSF031H02Sequence650009005 (7)gb|AFQ00710.1|8e-104pyrophosphate-energized vacuolar membrane proteon pump 1 [Ipomoea batatas]732004749 (5)gb|ABK94904.1|6e-114unknown [Populus trichocarpa]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS088E10+                                                AAGACCATTAGCAGCAAGAAGGA
                      ____________________________________________________________
consensus                                                  AAGACCATTAGCAGCAAGAAGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF031H02+                                 AAACGCTGTGATGAAAGCCTTCCCAACGCCCTTTCTAG
JMFS088E10+           AACCCATCACAGCACCCGATCTAAACGCTGTGATGAAAGCCTTCCCAACGCCCTTTCTAG
JMFS168B05+                                 AAACGCTGTGATGANAGCCTTCCCACNGCCCTTTCTAG
JMFS115F05+                                                  CCTTCCCAACGCCCTTTCTAG
JMFS021G05+                                 AAACGCTGTGATGAAAGCCTTCCCAACGCCCTTTNTAG
                      ____________________________________________________________
consensus             AACCCATCACAGCACCCGATCTAAACGCTGTGATGAAAGCCTTCCCAACGCCCTTTCTAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF031H02+           CCTCCAGGGTAGTCCTGGCATTTGCATAAGTTGCGATTTTCATTCCAAGAAATCCAGACA
JMFS088E10+           CCTCCAGGGTAGTCCTGGCATTTGCATAAGTTGCGATTTTCATTCCAAGAAATCCAGACA
JMFS168B05+           CCTCCAGGGTAGTCCTGGCATNTGCATAAGTTGCGATTTTCATTCCAAGAAATCCAGACA
JMFS095C02+                            GCATNTGCATAAGTTGCGATTTTCATTCCAAGAAATCCAGACA
JMFF026P22+                                                  TCATTCCAAGAAATCCAGACA
JMFS115F05+           CCTCCAGGGTAGTCCTGGCATTTGCATAAGTTGCGATTTTCATTCCAAGAAATCCAGACA
JMFS021G05+           CCTCCAGGGTAGTCCTGGCATTTGCATAAGTTGCGATTTTCATTCCAAGAAATCCAGACA
                      ____________________________________________________________
consensus             CCTCCAGGGTAGTCCTGGCATTTGCATAAGTTGCGATTTTCATTCCAAGAAATCCAGACA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF031H02+           CTACTGAAGTAACAGCACCGAGCAAGAAAGATATGGTGCTGAAGACAGCAGTGGCAAGAG
JMFS088E10+           CTACTGAAGTAACAGCACCGAGCAAGAAAGATATGGTGCTGAAGACAGCAGTGGCAAGAG
JMFS168B05+           CTACTGAAGTAACAGCACCGAGCAAGAAAGATATGGTGCTGAAGACAGCAGTGGCAAGAG
JMFS095C02+           CTACTGAAGTAACAGCACCGAGCAAGAAAGATATGGTGCTGAAGACAGCAGTGGCAAGAG
JMFF026P22+           CTACTGAAGTAACAGCACCGAGCAAGAAAGATATGGTGCTGAAGACAGCAGTGGCAAGAG
JMFS115F05+           CTACTGAAGTAACAGCACCGAGCAAGAAAGATATGGTGCTGAAGACAGCAGTGGCAAGAG
JMFS021G05+           CTACTGAAGTAACAGCACCGAGCAAGAAAGATATGGTGCTGAAGACAGCAGTGGCAAGAG
                      ____________________________________________________________
consensus             CTACTGAAGTAACAGCACCGAGCAAGAAAGATATGGTGCTGAAGACAGCAGTGGCAAGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF031H02+           CGGGCTTGCACATTTTGGAGCTGTCATATGTACATGCCCGGCTCTTTGTGCTGAAACTCT
JMFS088E10+           CGGGCTTGCACATTTTGGAGCTGTCATATGTACATGCCCGGCTCTTTGTGCTGAAACTCT
JMFS168B05+           CGGGCTTGCACATTTTGGAGCTGTCATATGTACATGCCCGGCTCTTTGTGCTGAAACTCT
JMFS095C02+           CGGGCTTGCACATTTTGGAGCTGTCATATGTACATGCCCGGCTCTTTGTGCTGAAACTCT
JMFF026P22+           CGGGCTTGCACATTTTGGAGCTGTCATATGTACATGCCCGGCTCTTTGTGCTGAAACTCT
JMFS115F05+           CGGGCTTGCACATTTTGGAGCTGTCATATGTACATGCCCGGCTCTTTGTGCTGAAACTCT
JMFS021G05+           CGGGCTTGCACATTTTGGAGCTGTCATATGTACATGCCCGGCTCTTTGTGCTGAAACTCT
                      ____________________________________________________________
consensus             CGGGCTTGCACATTTTGGAGCTGTCATATGTACATGCCCGGCTCTTTGTGCTGAAACTCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF031H02+           CAACCGAGCCAAGGAAAACAAAGATCAAAATGGCAAAGGCTACCATGAATACACCAACAT
JMFS088E10+           CAACCGAGCCAAGGAAAACAAAGATCAAAATGGCAAAGGCTACCATGAATACACCAACAT
JMFS168B05+           CAACCGAGCCAAGGAAAACAAAGATCAAAATGGCAAAGGCTACCATGAATACACCAACAT
JMFS095C02+           CAACCGAGCCAAGGAAAACAAAGATCAAAATGGCAAAGGCTACCATGAATACACCAACAT
JMFF026P22+           CAACCGAGCCAAGGAAAACAAAGATCAAAATGGCAAAGGCTACCATGAATACACCAACAT
JMFS115F05+           CAACCGAGCCAAGGAAAACAAAGATCAAAATGGCAAAGGCTACCATGAATACACCAACAT
JMFS021G05+           CAACCGAGCCAAGGAAAACAAAGATCAAAATGGCAAAGGCTACCATGAATACACCAACAT
                      ____________________________________________________________
consensus             CAACCGAGCCAAGGAAAACAAAGATCAAAATGGCAAAGGCTACCATGAATACACCAACAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF031H02+           ACTGGTATTCCGTGAAAAGGAATGAAGTTGCACCTTCGGAGATGGCGTTTTGGATGTCGG
JMFS088E10+           ACTGGTATTCCGTGAAAAGGAATGAAGTTGCACCTTCGGAGATGGCGTTTTGGATGTCGG
JMFS168B05+           ACTGGTATTCCGTGAAAAGGAATGAAGTTGCACCTTCGGAGATGGCGTTTTGGATGTCGG
JMFS095C02+           ACTGGTATTCCGTGAAAAGGAATGAAGTTGCACCTTCGGAGATGGCGTTTTGGATGTCGG
JMFF026P22+           ACTGGTATTCCGTGAAAAGGAATGAAGTTGCACCTTCGGAGATGGCGTTTTGGATGTCGG
JMFS115F05+           ACTGGTATTCCGTGAAAAGGAATGAAGTTGCACCTTCGGAGATGGCGTTTTGGATGTCGG
JMFS021G05+           ACTGGTATTCCGTGAAAAGGAATGAAGTTGCACCTTCGGAGATGGCGTTTTGGATGTCGG
                      ____________________________________________________________
consensus             ACTGGTATTCCGTGAAAAGGAATGAAGTTGCACCTTCGGAGATGGCGTTTTGGATGTCGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF031H02+           CGCACTTGTGAACGACGCTGTGGTCATTGATGCCTTCCTCCTCCTCAATAAGCGACTCGG
JMFS088E10+           CGCACTTGTGAACGACGCTGTGGTCATTGATGCCTTCCTCCTCCTCAATAAGCGACTCGG
JMFS168B05+           CGCACTTGTGAACGACGCTGTGGTCATTGATGCCTTCCTCCTCCTCAATAAGCGACTCGG
JMFS095C02+           CGCACTTGTGAACGACGCTGTGGTCATTGATGCCTTCCTCCTCCTCAATAAGCGACTCGG
JMFF026P22+           CGCACTTGTGAACGACGCTGTGGTCATTGATGCCTTCCTCCTCCTCAATAAGCGACTCGG
JMFS115F05+           CGCACTTGTGAACGACGCTGTGGTCATTGATGCCTTCCTCCTCCTCAATAAGCGACTCGG
JMFS021G05+           CGCACTTGTGAACGACGCTGTGGTCATTGATGCCTTCCTCCTCCTCAATAAGCGACTCGG
                      ____________________________________________________________
consensus             CGCACTTGTGAACGACGCTGTGGTCATTGATGCCTTCCTCCTCCTCAATAAGCGACTCGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF031H02+           AGAAGCCGTTTTTGGCAGTTGGGGCGGAATTGTCCGGGGAGAGCTTGACCTTGGAGACGA
JMFS088E10+           AGAAGCCGTTTTTGGCAGTTGGGGCGGAATTGTCCGGGGAGAGCTTGACCTTGGAGACGA
JMFS168B05+           AGAAGCCGTTTTTGGCAGTTGGGGCGGAATTGTCCGGGGAGAGCTTGACCTTGGAGACGA
JMFS095C02+           AGAAGCCGTTTTTGGCAGTTGGGGCGGAATTGTCCGGGGAGAGCTTGACCTTGGAGACGA
JMFF026P22+           AGAAGCCGTTTTTGGCAGTTGGGGCGGAATTGTCCGGGGAGAGCTTGACCTTGGAGACGA
JMFS115F05+           AGAAGCCGTTTTTGGCAGTTGGGGCGGAATTGTCCGGGGAGAGCTTGACCTTGGAGACGA
JMFS021G05+           AGAAGCCGTTTTTGGCAGTTGGGGCGGAATTGTCCGGGGAGAGCTTGACCTTGGAGACGA
                      ____________________________________________________________
consensus             AGAAGCCGTTTTTGGCAGTTGGGGCGGAATTGTCCGGGGAGAGCTTGACCTTGGAGACGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF031H02+           GGACCCACTGGAGGAGAGCGAAGGCGATGCCGATGACGGCGCACACCGGGATCAGGATCT
JMFS088E10+           GGACCCACTGGAGGAGAGCGAAGGCGATGCCGATGACGGCGCACACCGGGATCAGGATCT
JMFS168B05+           GGACCCACTGGAGGAGAGCGAAGGCGATGCCGATGACGGCGCACACCGGGATCAGGATCT
JMFS095C02+           GGACCCACTGGAGGAGAGCGAAGGCGATGCCGATGACGGCGCACACCGGGATCAGGATCT
JMFF026P22+           GGACCCACTGGAGGAGAGCGAAGGCGATGCCGATGACGGCGCACACCGGGATCAGGATCT
JMFS115F05+           GGACCCACTGGAGGAGAGCGAAGGCGATGCCGATGACGGCGCACACCGGGATCAGGATCT
JMFS021G05+           GGACCCACTGGAGGAGAGCGAAGGCGATGCCGATGACGGCGCACACCGGGATCAGGATCT
                      ____________________________________________________________
consensus             GGACCCACTGGAGGAGAGCGAAGGCGATGCCGATGACGGCGCACACCGGGATCAGGATCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF031H02+           CGGTGGCGAGATCTGGCAGAAT                                      
JMFS088E10+           CGGTGGCGAGATCTGGCAGAATTGTCACTCCACTCATCTCTGGGACGGCGGATATGGGCG
JMFS168B05+           CGGTGGCGAGATCTGGCAGAATTGTCACTCCACTCATCTCTGGGACGGCGGATATGGGCG
JMFS095C02+           CGGTGGCGAGATCTGGCAGAAT                                      
JMFF026P22+           CGGTGGCGAGATCTGGCAGAAT                                      
JMFS115F05+           CGGTGGCGAGATCTGGCAGAATTGTCACTCCACTCATCTCTGGGACGGCGGATATGGGCG
JMFS021G05+           CGGTGGCGAGATCTGGCAGAATTGTCACTCCACTCATCTCTGGGACGGCGGATATGGGCG
                      ____________________________________________________________
consensus             CGGTGGCGAGATCTGGCAGAATTGTCACTCCACTCATCTCTGGGACGGCGGATATGGGCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS088E10+           TGAGAGAGAGAAATGAGAAATGTGCGCAGTACACAGAGA                     
JMFS168B05+           TGAGAGAGAGAAATGAGAAATGTGCGCAGTACACAGAGAGAAGA                
JMFS115F05+           TGAGAGAGAGAAATGAGAAATGTGCGCAGTACACAGAGAGAAGAAGCAAATCAAGTTC  
JMFS021G05+           TGAGAGAGAGAAATGAGAAATGTGCGCAGTACACAGAGAGAAGAAGCAAATCAAGTTCGG
                      ____________________________________________________________
consensus             TGAGAGAGAGAAATGAGAAATGTGCGCAGTACACAGAGAGAAGAAGCAAATCAAGTTCGG