Contig 009003:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS020B06Sequence642009003 (2)ref|XP_006433328.1|1e-48hypothetical protein CICLE_v10000150mg [Citrus clementina] ref|XP_006472017.1| P
JMFS143F03Sequence625009003 (2)gb|KJB45239.1|1e-30hypothetical protein B456_007G297200 [Gossypium raimondii]

Alignment

This contig is upended


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JMFS143F03+           CTCCACATGTCAGACTCTCCATAACCTTTCACATCAACAGTTATTTCAACATTGTACAGA
                      ____________________________________________________________
consensus             CTCCACATGTCAGACTCTCCATAACCTTTCACATCAACAGTTATTTCAACATTGTACAGA
 
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JMFS143F03+           GATTGCTTCCCCATGCCATTAGGCCACCACAAACTTGGTTTGTAGAAAAATAGCTGTGGA
                      ____________________________________________________________
consensus             GATTGCTTCCCCATGCCATTAGGCCACCACAAACTTGGTTTGTAGAAAAATAGCTGTGGA
 
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JMFS143F03+           AGGAGAGATATAAACAACTTGAATAGTCAGGTGCCAATGCCAAAGGAAACATTCACCGTT
                      ____________________________________________________________
consensus             AGGAGAGATATAAACAACTTGAATAGTCAGGTGCCAATGCCAAAGGAAACATTCACCGTT
 
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JMFS143F03+           CCTTTTGAAGAACTACAATGCAAAAGATGTTAAGTACAGGGATGCTTTTCCGAGCATTGC
                      ____________________________________________________________
consensus             CCTTTTGAAGAACTACAATGCAAAAGATGTTAAGTACAGGGATGCTTTTCCGAGCATTGC
 
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JMFS143F03+           CAGGCTACCTATTTAGCTTCCCGGCCTGACTCTATAAATCAACTTCAACAATGCAATAGA
                      ____________________________________________________________
consensus             CAGGCTACCTATTTAGCTTCCCGGCCTGACTCTATAAATCAACTTCAACAATGCAATAGA
 
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JMFS143F03+           AAAGGAGAAAGCACATAAACTTCTTGAAAAAGTAGTATTGAAGAAAAACATCCATACAAG
                      ____________________________________________________________
consensus             AAAGGAGAAAGCACATAAACTTCTTGAAAAAGTAGTATTGAAGAAAAACATCCATACAAG
 
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JMFS143F03+           ATATGATGTCCTTAGCCTTGCAACAAAGTAACACTACTAACCTGAGGAAATGTATATTGA
JMFS020B06+                                                    CTGAGGAAATGTATATTGA
                      ____________________________________________________________
consensus             ATATGATGTCCTTAGCCTTGCAACAAAGTAACACTACTAACCTGAGGAAATGTATATTGA
 
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JMFS143F03+           ACATGTGCTCCAGGAGAAAGAGACACTTTCTGTGTCTCAAGATGCTCAACCAAGCACATA
JMFS020B06+           ACATGTGCTCCAGGAGAAAGAGACACTTTCTGTGTCTCAAGATGCTCAACCAAGCACATA
                      ____________________________________________________________
consensus             ACATGTGCTCCAGGAGAAAGAGACACTTTCTGTGTCTCAAGATGCTCAACCAAGCACATA
 
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JMFS143F03+           TTTCCTTCAAGTTCAGTTGACACTTGGATGTTTAAAGAACACTCAGCTTCCCAGGCACTT
JMFS020B06+           TTTCCTTCAAGTTCAGTTGACACTTGGATGTTTAAAGAACACTCAGCTTCCCAGGCACTT
                      ____________________________________________________________
consensus             TTTCCTTCAAGTTCAGTTGACACTTGGATGTTTAAAGAACACTCAGCTTCCCAGGCACTT
 
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JMFS143F03+           TTATTAACCAACTCAGTTGTGGTATGCAGATATACCCTTTTGTAATCATCAAAGAATGAA
JMFS020B06+           TTATTAACCAACTCAGTTGTGGTATGCAGATATACCCTTTTGTAATCATCAAAGAATGAA
                      ____________________________________________________________
consensus             TTATTAACCAACTCAGTTGTGGTATGCAGATATACCCTTTTGTAATCATCAAAGAATGAA
 
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JMFS143F03+           GATACCAAGTGAGGATCCACAATCT                                   
JMFS020B06+           GATACCAAGTGAGGATCCACAATCTTCACTGGCTGTACAAACAATAACTAAATCATCATC
                      ____________________________________________________________
consensus             GATACCAAGTGAGGATCCACAATCTTCACTGGCTGTACAAACAATAACTAAATCATCATC
 
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JMFS020B06+           TTAGAAATCTCAAAAGACCTTGGATACTTTGGGCTGTATTTTGATGGTCTAATATTAATC
                      ____________________________________________________________
consensus             TTAGAAATCTCAAAAGACCTTGGATACTTTGGGCTGTATTTTGATGGTCTAATATTAATC
 
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JMFS020B06+           GTCTAGAAAATTAAACAAAATCCACCCCACAAAAAATAAAAAATAAAAATGATGAGGAAA
                      ____________________________________________________________
consensus             GTCTAGAAAATTAAACAAAATCCACCCCACAAAAAATAAAAAATAAAAATGATGAGGAAA
 
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JMFS020B06+           TAAACTTTAAAACTCACCCCTGTTACTGTAATGGACACCTCATCCCAGATTCCAGTATTC
                      ____________________________________________________________
consensus             TAAACTTTAAAACTCACCCCTGTTACTGTAATGGACACCTCATCCCAGATTCCAGTATTC
 
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JMFS020B06+           CTATCCCTGATTGGAGTCATCCAATCCCATCCTTCAACATATTGTGCAGCAACATCTTTC
                      ____________________________________________________________
consensus             CTATCCCTGATTGGAGTCATCCAATCCCATCCTTCAACATATTGTGCAGCAACATCTTTC