Contig 009000:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS019B04Sequence641009000 (6)ref|XP_010249725.1|52.8PREDICTED: disease resistance protein RPM1-like [Nelumbo nucifera]
JMFS024E06Sequence623009000 (6)ref|XP_010249725.1|52.8PREDICTED: disease resistance protein RPM1-like [Nelumbo nucifera]
JMFS026F01Sequence298009000 (6)
JMFS061G07Sequence588009000 (6)ref|XP_010249725.1|52.8PREDICTED: disease resistance protein RPM1-like [Nelumbo nucifera]
JMFS126B09Sequence626009000 (6)ref|XP_010249725.1|52.8PREDICTED: disease resistance protein RPM1-like [Nelumbo nucifera]
JMSF004A10Sequence192009000 (6)358004183 (2)

Alignment

This contig is upended


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JMFS126B09+                                    CCAAATCGTGATCAACTTCACTTGACCACTACGCT
JMFS061G07+                                                          TGACCACTACGCT
JMFS024E06+                                                    TTCACTTGACCACTACGCT
JMFS019B04+                              AGTTCCCCAAATCGTGATCACNTTCACTTGACCACTACGCT
                      ____________________________________________________________
consensus                                AGTTCCCCAAATCGTGATCACCTTCACTTGACCACTACGCT
 
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JMFS126B09+           TCTCAATCAGTTGTGCTATCCGGTCGACTTCCATGTCGATCCCCACTGCTTCTATCCCCT
JMFS061G07+           TCTCAATCAGTTGTGCTATCCGGTCGACTTCCATGTCGATCCCCACTGCTTCTATCCCCT
JMFS024E06+           TCTCAATCAGTTGTGCTATCCGGTCGACTTCCATGTCGATCCCCACTGCTTCTATCCCCT
JMFS019B04+           TCTCAATCAGTTGTGCTATCCGGTCGACTTCCATGTCGATCCCCACTGCTTCTATCCCCT
                      ____________________________________________________________
consensus             TCTCAATCAGTTGTGCTATCCGGTCGACTTCCATGTCGATCCCCACTGCTTCTATCCCCT
 
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JMFS126B09+           CCATATATCCACTCCCACTTCCTACTAACTCATTGCTGCTGCTGCTGCTGCTTCCTTCAT
JMFS061G07+           CCATATATCCACTCCCACTTCCTACTAACTCATTGCTGCTGCTGCTGCTGCTTCCTTCAT
JMFS026F01+                                                                   TCAT
JMFS024E06+           CCATATATCCACTCCCACTTCCTACTAACTCATTGCTGCTGCTGCTGCTGCTTCCTTCAT
JMFS019B04+           CCATATATCCACTCCCACTTCCTACTAACTCATTGCTGCTGCTGCTGCTGCTTCCTTCAT
                      ____________________________________________________________
consensus             CCATATATCCACTCCCACTTCCTACTAACTCATTGCTGCTGCTGCTGCTGCTTCCTTCAT
 
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JMFS126B09+           TTGTCTTAACTTCTATTTTGTACTTTGACTTCTCTTCTTCTAGAAGAAGCAGCTTCTCAT
JMFS061G07+           TTGTCTTAACTTCTATTTTGTACTTTGACTTCTCTTCTTCTAGAAGAAGCAGCTTCTCAT
JMFS026F01+           TTGTCTGAACTTCTATTTTGTACTTTGACTTCTCTTCTTCTAGAAGAAGCAGCTTCTCAT
JMFS024E06+           TTGTCTTAACTTCTATTTTGTACTTTGACTTCTCTTCTTCTAGAAGAAGCAGCTTCTCAT
JMFS019B04+           TTGTCTTAACTTCTATTTTGTACTTTGACTTCTCTTCTTCTAGAAGAAGCAGCTTCTCAT
                      ____________________________________________________________
consensus             TTGTCTTAACTTCTATTTTGTACTTTGACTTCTCTTCTTCTAGAAGAAGCAGCTTCTCAT
 
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JMFS126B09+           CCATCTCTTTTAGCTGCTGATGGAAGCGATACTGGATCATCACCCTCTTGGCAAAGCTCT
JMFS061G07+           CCATCTCTTTTAGCTGCTGATGGAAGCGATACTGGATCATCACCCTCTTGGCAAAGCTCT
JMFS026F01+           CCATCTCTTTTAGCTGCTGATGGAAGCGATACTGGATCATCACCCTCTTGGCAAAGCTCT
JMFS024E06+           CCATCTCTTTTAGCTGCTGATGGAAGCGATACTGGATCATCACCCTCTTGGCAAAGCTCT
JMFS019B04+           CCATCTCTTTTAGCTGCTGATGGAAGCGATACTGGATCATCACCCTCTTGGCAAAGCTCT
                      ____________________________________________________________
consensus             CCATCTCTTTTAGCTGCTGATGGAAGCGATACTGGATCATCACCCTCTTGGCAAAGCTCT
 
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JMFS126B09+           GAATAGTGGCGATGAGGGACTTGGGTTGACAGAAATTGCAGGGTGGAGTATTGAGCTCAA
JMFS061G07+           GAATAGTGGCGATGAGGGACTTGGGTTGACAGAAATTGCAGGGTGGAGTATTGAGCTCAA
JMFS026F01+           GAATAGTGGCGATGAGGGACTTGGGTTGACAGAAATTGCAGGGTGGAGTATTGAGCTCAA
JMFS024E06+           GAATAGTGGCGATGAGGGACTTGGGTTGACAGAAATTGCAGGGTGGAGTATTGAGCTCAA
JMFS019B04+           GAATAGTGGCGATGAGGGACTTGGGTTGACAGAAATTGCAGGGTGGAGTATTGAGCTCAA
                      ____________________________________________________________
consensus             GAATAGTGGCGATGAGGGACTTGGGTTGACAGAAATTGCAGGGTGGAGTATTGAGCTCAA
 
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JMFS126B09+           GGAGCTTCATATCCACCATGAACTCCTCAACCAAGTCCTCGAGTTCAAGTGAGGTCTCCC
JMFS061G07+           GGAGCTTCATATCCACCATGAACTCCTCAACCAAGTCCTCGAGTTCAAGTGAGGTCTCCC
JMFS026F01+           GGAGCTTCATATCCACCATGAACTCCTCAACCAAGTCCTCGAGTTCAAGTGAGGTCTCCC
JMFS024E06+           GGAGCTTCATATCCACCATGAACTCCTCAACCAAGTCCTCGAGTTCAAGTGAGGTCTCCC
JMFS019B04+           GGAGCTTCATATCCACCATGAACTCCTCAACCAAGTCCTCGAGTTCAAGTGAGGTCTCCC
                      ____________________________________________________________
consensus             GGAGCTTCATATCCACCATGAACTCCTCAACCAAGTCCTCGAGTTCAAGTGAGGTCTCCC
 
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JMFS126B09+           TCAACTGATTCACCCAATTCTCTGCTATCTTGGTTTCCTGTTTCCCCCAACCCAAATGCT
JMFS061G07+           TCAACTGATTCACCCAATTCTCTGCTATCTTGGTTTCCTGTTTCCCCCAACCCAAATGCT
JMFS026F01+           TCAACTGATTCACCCAATTCTCTGCTATCTTGGTTTCCTGTTTCCCCCAACCCA      
JMSF004A10+                                                     TCCCCCAACCCAAATGCT
JMFS024E06+           TCAACTGATTCACCCAATTCTCTGCTATCTTGGTTTCCTGTTTCCCCCAACCCAAATGCT
JMFS019B04+           TCAACTGATTCACCCAATTCTCTGCTATCTTGGTTTCCTGTTTCCCCCAACCCAAATGCT
                      ____________________________________________________________
consensus             TCAACTGATTCACCCAATTCTCTGCTATCTTGGTTTCCTGTTTCCCCCAACCCAAATGCT
 
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JMFS126B09+           CAACATAGCCTTTCATATTTTCTAGCCGAGTTGTGATTTTTTCTGTCTCAGCTTTGATTC
JMFS061G07+           CAACATAGCCTTTCATATTTTCTAGCCGAGTTGTGATTTTTTCTGTCTCAGCTTTGATTC
JMSF004A10+           CAACATAGCCTTTCATATTTTCTAGCCGAGTTGTGATTTTTTCTGTCTCAGCTTTGATTC
JMFS024E06+           CAACATAGCCTTTCATATTTTCTAGCCGAGTTGTGATTTTTTCTGTCTCAGCTTTGATTC
JMFS019B04+           CAACATAGCCTTTCATATTTTCTAGCCGAGTTGTGATTTTTTCTGTCTCAGCTTTGATTC
                      ____________________________________________________________
consensus             CAACATAGCCTTTCATATTTTCTAGCCGAGTTGTGATTTTTTCTGTCTCAGCTTTGATTC
 
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JMFS126B09+           TCCACTGGAATATAAATTCTTGGTAAGCTGGTTCCTTCAGCTTTTCAACCAGAGCATTAA
JMFS061G07+           TCCACTGGAATATAAATTCTTGGTAAGCTGGTTCCTTCAGCTTTTCAACCAGAGCATTAA
JMSF004A10+           TCCACTGGAATATAAATTCTTGGTAAGCTGGTTCCTTCAGCTTTTCAACCAGAGCATTAA
JMFS024E06+           TCCACTGGAATATAAATTCTTGGTAAGCTGGTTCCTTCAGCTTTTCAACCAGAGCATTAA
JMFS019B04+           TCCACTGGAATATAAATTCTTGGTAAGCTGGTTCCTTCAGCTTTTCAACCAGAGCATTAA
                      ____________________________________________________________
consensus             TCCACTGGAATATAAATTCTTGGTAAGCTGGTTCCTTCAGCTTTTCAACCAGAGCATTAA
 
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JMFS126B09+           CTACAGTAGAAGCCATGGTTATTACAGAATAAGAGAGAGTGTCT                
JMFS061G07+           CTACAGTAGAAGCCATGGTTATTACAGAATAAGAG                         
JMSF004A10+           CTACAGTAGAAGCCATGGTTATTACAGAATAAGAGAGAGTGTCT                
JMFS024E06+           CTACAGTAGAAGCCATGGTTATTACAGAATAAGAGAGAGTGTCT                
JMFS019B04+           CTACAGTAGAAGCCATGGTTATTACAGAATAAGAGAGAGTGTCTAAAGCAGCCTCAGCCC
                      ____________________________________________________________
consensus             CTACAGTAGAAGCCATGGTTATTACAGAATAAGAGAGAGTGTCTAAAGCAGCCTCAGCCC