| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF001J23 | Sequence | 543 | 008998 (9) | gb|ACX42226.1| | 8e-92 | heat shock protein 90 [Ipomoea nil] | 776 | 001062 (6) | gb|ACX42226.1| | 2e-86 | heat shock protein 90 [Ipomoea nil] |
| JMFF011N08 | Sequence | 542 | 008998 (9) | gb|ACX42226.1| | 4e-91 | heat shock protein 90 [Ipomoea nil] | 721 | 001062 (6) | gb|ACX42226.1| | 1e-71 | heat shock protein 90 [Ipomoea nil] |
| JMFF018C19 | Sequence | 569 | 008998 (9) | gb|ACX42226.1| | 6e-97 | heat shock protein 90 [Ipomoea nil] | 471 | 001062 (6) | gb|ACX42226.1| | 4e-11 | heat shock protein 90 [Ipomoea nil] |
| JMFS009D08 | Sequence | 601 | 008998 (9) | gb|ACX42226.1| | 3e-111 | heat shock protein 90 [Ipomoea nil] | |||||
| JMFS018D02 | Sequence | 633 | 008998 (9) | gb|ACX42226.1| | 2e-95 | heat shock protein 90 [Ipomoea nil] | |||||
| JMFS087H02 | Sequence | 613 | 008998 (9) | gb|ACX42226.1| | 2e-106 | heat shock protein 90 [Ipomoea nil] | |||||
| JMFS138E02 | Sequence | 587 | 008998 (9) | gb|ACX42226.1| | 3e-118 | heat shock protein 90 [Ipomoea nil] | |||||
| JMSF034G23 | Sequence | 672 | 008998 (9) | gb|ACX42226.1| | 6e-113 | heat shock protein 90 [Ipomoea nil] | 610 | 001062 (6) | gb|ACX42226.1| | 1e-62 | heat shock protein 90 [Ipomoea nil] |
| JMSF049I18 | Sequence | 597 | 008998 (9) | gb|ACX42226.1| | 2e-91 | heat shock protein 90 [Ipomoea nil] | 699 | 001062 (6) | gb|ACX42226.1| | 9e-92 | heat shock protein 90 [Ipomoea nil] |
This contig is upended
. : . : . : . : . : . :
JMFF018C19+ CTGTGGTGAAGTGAGTGTAAGCAAGTGGATCCAGGAACTCGCTAAAGGTATTC
____________________________________________________________
consensus CTGTGGTGAAGTGAGTGTAAGCAAGTGGATCCAGGAACTCGCTAAAGGTATTC
. : . : . : . : . : . :
JMFF018C19+ TTATAGAATTCCTGGTACTGTTCTTTCTCAACATCCTTTGGACTGCGCATCCATATGGGC
____________________________________________________________
consensus TTATAGAATTCCTGGTACTGTTCTTTCTCAACATCCTTTGGACTGCGCATCCATATGGGC
. : . : . : . : . : . :
JMFF018C19+ TTTGTCTCATTCGTTAATTCCCAGTCCCAGTACTTTTCAGTTTTGGTCTTCTTCGTCTTT
____________________________________________________________
consensus TTTGTCTCATTCGTTAATTCCCAGTCCCAGTACTTTTCAGTTTTGGTCTTCTTCGTCTTT
. : . : . : . : . : . :
JMFF018C19+ TTCTTCTCTCCCTCAGTATTTTCTTCTCCTTCTTTAGGCTCCTCCTCTTCTTCCACCTCA
____________________________________________________________
consensus TTCTTCTCTCCCTCAGTATTTTCTTCTCCTTCTTTAGGCTCCTCCTCTTCTTCCACCTCA
. : . : . : . : . : . :
JMFF018C19+ ACAGTTCTTGATTTCTCTTGCCAAGTGTAGATGGGGAAGGAAACAAATTGTGAGTAGGTC
JMFS138E02+ ATGGGGAAGGAAACAAATTGTGAGTAGGTC
____________________________________________________________
consensus ACAGTTCTTGATTTCTCTTGCCAAGTGTAGATGGGGAAGGAAACAAATTGTGAGTAGGTC
. : . : . : . : . : . :
JMFF018C19+ TTCACCAAATCTTGGATCTTCTTTGGTTCTGCGAATTCATACTTGTCATCCTCCCTTAAA
JMFS138E02+ TTCACCAAATCTTGGATCTTCTTTGGTTCTGCGAATTCATACTTGTCATCCTCCCTTAAA
____________________________________________________________
consensus TTCACCAAATCTTGGATCTTCTTTGGTTCTGCGAATTCATACTTGTCATCCTCCCTTAAA
. : . : . : . : . : . :
JMFF018C19+ TATAGAGTAATTTGTGTTCCTCTGGGCAGGAGCTTTTCAGGGTCAGTTTCCTCCCTAATC
JMFS138E02+ TATAGAGTAATTTGTGTTCCTCTGGGCAGGAGCTTTTCAGGGTCAGTTTCCTCCCTAATC
____________________________________________________________
consensus TATAGAGTAATTTGTGTTCCTCTGGGCAGGAGCTTTTCAGGGTCAGTTTCCTCCCTAATC
. : . : . : . : . : . :
JMFF018C19+ TTGTATGAGCTGCTATCGGCAAGAGCTTCCCAAACATATTGCTTGTCTGACCTGGGGCTC
JMFS138E02+ TTGTATGAGCTGCTATCGGCAAGAGCTTCCCAAACATATTGCTTGTCTGACCTGGGGCTC
____________________________________________________________
consensus TTGTATGAGCTGCTATCGGCAAGAGCTTCCCAAACATATTGCTTGTCTGACCTGGGGCTC
. : . : . : . : . : . :
JMFF018C19+ TTAGTAGAAACTACAACCTTTTCAGCAACCAAGAAAGCAGAATAAAATCCAACACCAAAT
JMFS138E02+ TTAGTAGAAACTACAACCTTTTCAGCAACCAAGAAAGCAGAATAAAATCCAACACCAAAT
____________________________________________________________
consensus TTAGTAGAAACTACAACCTTTTCAGCAACCAAGAAAGCAGAATAAAATCCAACACCAAAT
. : . : . : . : . : . :
JMFF018C19+ TGACCAATCAATCCATTATCTGATGCAAGATCCTTA
JMFS138E02+ TGACCAATCAATCCATTATCTGATGCAAGATCCTTATTCTCCTTAAGAGCATTCAAAAAC
JMFS009D08+ AGCATTCAAAAAC
JMSF034G23+ AGCATTCAAAAAC
____________________________________________________________
consensus TGACCAATCAATCCATTATCTGATGCAAGATCCTTATTCTCCTTAAGAGCATTCAAAAAC
. : . : . : . : . : . :
JMFS138E02+ TTTTTGGTACCACTTTGTGCAATGGTTCCAAGACAGTCTATGAGATCTTCCCTTGTCATT
JMFS087H02+ GTACCACTTTGTGCAATGGTTCCAAGACAGTCTATGAGATCTTCCCTTGTCATT
JMFS009D08+ TTTTTGGTACCACTTTGTGCAATGGTTCCAAGACAGTCTATGAGATCTTCCCTTGTCATT
JMSF034G23+ TTTTTGGTACCACTTTGTGCAATGGTTCCAAGACAGTCTATGAGATCTTCCCTTGTCATT
____________________________________________________________
consensus TTTTTGGTACCACTTTGTGCAATGGTTCCAAGACAGTCTATGAGATCTTCCCTTGTCATT
. : . : . : . : . : . :
JMFS138E02+ CCTATACCAGTATCAGTTATGGTGATGGTCCCATTGTCTGGGTCGGCTTTGATACGAATC
JMFS087H02+ CCTATACCAGTATCAGTTATGGTGATGGTCCCATTGTCTGGGTCGGCTTTGATACGAATC
JMFS009D08+ CCTATACCAGTATCAGTTATGGTGATGGTCCCATTGTCTGGGTCGGCTTTGATACGAATC
JMFF011N08+ TTGATACGAATC
JMFF001J23+ TTTGATACGAATC
JMSF034G23+ CCTATACCAGTATCAGTTATGGTGATGGTCCCATTGTCTGGGTCGGCTTTGATACGAATC
JMSF049I18+ TGATACGAATC
JMFS018D02+ GTCCCATTGTCTGGGTCGGCTNTGATACGAATC
____________________________________________________________
consensus CCTATACCAGTATCAGTTATGGTGATGGTCCCATTGTCTGGGTCGGCTTTGATACGAATC
. : . : . : . : . : . :
JMFS138E02+ TGAAGCTCACCAGCATCACCAAGTAAAGAAGGCTCAGTCACACTCAAAAACCTTAACTTG
JMFS087H02+ TGAAGCTCACCAGCATCACCAAGTAAAGAAGGCTCAGTCACACTCAAAAACCTTAACTTG
JMFS009D08+ TGAAGCTCACCAGCATCACCAAGTAAAGAAGGCTCAGTCACACTCAAAAACCTTAACTTG
JMFF011N08+ TGAAGCTCACCAGCATCACCAAGTAAAGAAGGCTCAGTCACACCCAAAAACCTTAACTTG
JMFF001J23+ TGAAGCTCACCAGCATCACCAAGTAAAGAAGGCTCAGTCACACCCAAAAACCTTAACTTG
JMSF034G23+ TGAAGCTCACCAGCATCACCAAGTAAAGAAGGCTCAGTCACACTCAAAAACCTTAACTTG
JMSF049I18+ TGAAGCTCACCAGCATCACCAAGTAAAGAAGGCTCAGTCACACTCAAAAACCTTAACTTG
JMFS018D02+ TGAAGCTCACCAGCATCACCAAGTAAAGAAGGCTCAGTCACACTCAAAAACCTTAACTTG
____________________________________________________________
consensus TGAAGCTCACCAGCATCACCAAGTAAAGAAGGCTCAGTCACACTCAAAAACCTTAACTTG
. : . : . : . : . : . :
JMFS138E02+ TCAAGTGCATCACTTGCATTACTAACAAGTTCTCGAAGAAAGATCTCCTTGTGGCTGTAT
JMFS087H02+ TCAAGTGCATCACTTGCATTACTAACAAGTTCTCGAAGAAAGATCTCCTTGTGGCTGTAT
JMFS009D08+ TCAAGTGCATCACTTGCATTACTAACAAGTTCTCGAAGAAAGATCTCCTTGTGGCTGTAT
JMFF011N08+ TCAAGTGCATCACTTGCATTACTAACAAGTTCTCGAAGAAAGATCTCCTTGTGGCTGTAT
JMFF001J23+ TCAAGTGCATCACTTGCATTACTAACAAGTTCTCGAAGAAAGATCTCCTTGTGGCTGTAT
JMSF034G23+ TCAAGTGCATCACTTGCATTACTAACAAGTTCTCGAAGAAAGATCTCCTTGTGGCTGTAT
JMSF049I18+ TCAAGTGCATCACTTGCATTACTAACAAGTTCTCGAAGAAAGATCTCCTTGTGGCTGTAT
JMFS018D02+ TCAAGTGCATCACTTGCATTACTAACAAGTTCTCGAAGAAAGATCTCCTTGTGGCTGTAT
____________________________________________________________
consensus TCAAGTGCATCACTTGCATTACTAACAAGTTCTCGAAGAAAGATCTCCTTGTGGCTGTAT
. : . : . : . : . : . :
JMFS138E02+ AAACTGTGAACTATCAA
JMFS087H02+ AAACTGTGAACTATCAAGTCCAATAGGCGGCTGACCTCAGCCTGGTACCCATGGGTCTCT
JMFS009D08+ AAACTGTGAACTATCAAGTTCAATAGGCGGCTGACCTCAGCCTGGTACCCATGGGTCTCT
JMFF011N08+ AAACTGTGAACTATCAAGTCCAATAGGCGGCTGACCTCAGCCTGGTACCCATGGGTCTCT
JMFF001J23+ AAACTGTGAACTATCAAGTCCAATAGGCGGCTGACCTCAGCCTGGTACCCATGGGTCTCT
JMSF034G23+ AAACTGTGAACTATCAAGTCCAATAGGCGGCTGACCTCAGCCTGGTACCCATGGGTCTCT
JMSF049I18+ AAACTGTGAACTATCAAGTCCAATAGGCGGCTGACCTCAGCCTGGTACCCATGGGTCTCT
JMFS018D02+ AAACTGTGAACTATCAAGTCCAATAGGCGGCTGACCTCAGCCTGGTACCCATGGGTCTCT
____________________________________________________________
consensus AAACTGTGAACTATCAAGTCCAATAGGCGGCTGACCTCAGCCTGGTACCCATGGGTCTCT
. : . : . : . : . : . :
JMFS087H02+ CCCTCGCTCTCAGGGGCTTCCTTCTCAGCCACGGCAGAGGCCTCACACCTCACCACCACA
JMFS009D08+ CCCTCGCTCTCAGGGGCTTCCTTCTCAGCCACGGCAGAGGCCTCACACCTCACCACCACA
JMFF011N08+ CCCTCGCTCTCAGGGGCTTCCTTCTCAGCCACGGCAGAGGCCTCACACCTCACCACCACA
JMFF001J23+ CCCTCGCTCTCAGGGGCTTCCTTCTCAGCCACGGCAGAGGCCTCACACCTCACCACCACA
JMSF034G23+ CCCTCGCTCTCAGGGGCTTCCTTCTCAGCCACGGCAGAGGCCTCACACCTCACCACCACA
JMSF049I18+ CCCTCGCTCTCAGGGGCTTCCTTCTCAGCCACGGCAGAGGCCTCACACCTCACCACCACA
JMFS018D02+ CCCTCGCTCTCAGGGGCTTCCTTCTCAGCCACGGCAGAGGCCTCACACCTCACCACCACA
____________________________________________________________
consensus CCCTCGCTCTCAGGGGCTTCCTTCTCAGCCACGGCAGAGGCCTCACACCTCACCACCACA
. : . : . : . : . : . :
JMFS087H02+ CTGCTATCTCTCCTCTCAAGCTTCCATTTCAACCCGGAGCTGGAGAGCCTGTTCCTCAGA
JMFS009D08+ CTGCTATCTCTCCTCTCAAGCTTCCATTTCAACCCGGAGCTGGAGAGCCTGTTCCTCAGA
JMFF011N08+ CTGCTATCTCTCCTCTCAAGCTTCCATTTCAACCCGGAGCTGGAGAGCCTGTTCCTCAGA
JMFF001J23+ CTGCTATCTCTCCTCTCAAGCTTCCATTTCAACCCGGAGCTGGAGAGCCTGTTCCTCAGA
JMSF034G23+ CTGCTATCTCTCCTCTCAAGCTTCCATTTCAACCCGGAGCTGGAGAGCCTGTTCCTCAGA
JMSF049I18+ CTGCTATCTCTCCTCTCAAGCTTCCATTTCAACCCGGAGCTGGAGAGCCTGTTCCTCAGA
JMFS018D02+ CTGCTATCTCTCCTCTCAAGCTTCCATTTCAACCCGGAGCTGGAGAGCCTGTTCCTCAGA
____________________________________________________________
consensus CTGCTATCTCTCCTCTCAAGCTTCCATTTCAACCCGGAGCTGGAGAGCCTGTTCCTCAGA
. : . : . : . : . : . :
JMFS087H02+ CCATTCCTGGGCAAGAAAGCACTTCTCAACGCTGCTACCCTATTGCCACCTGCACTCTTC
JMFS009D08+ CCATTCCTGGGCAAGAAAGCACTTCTCAACGCTGCTACCCTATTGCCACCTGCACTCTTC
JMFF011N08+ CCATTCCTGGGCAAGAAAGCACTTCTCAACGCTGCTACCCTATTGCCACCTGCACTCTTC
JMFF001J23+ CCATTCCTGGGCAAGAAAGCACTTCTCAACGCTGCTACCCTATTGCCACCTGCACTCTTC
JMSF034G23+ CCATTCCTGGGCAAGAAAGCACTTCTCAACGCTGCTACCCTATTGCCACCTGCACTCTTC
JMSF049I18+ CCATTCCTGGGCAAGAAAGCACTTCTCAACGCTGCTACCCTATTGCCACCTGCACTCTTC
JMFS018D02+ CCATTCCTGGGCAAGAAAGCACTTCTCAACGCTGCTACCCTATTGCCACCTGCACTCTTC
____________________________________________________________
consensus CCATTCCTGGGCAAGAAAGCACTTCTCAACGCTGCTACCCTATTGCCACCTGCACTCTTC
. : . : . : . : . : . :
JMFS087H02+ TGTGGGAATGACGGCGTAAAGGGCACCGCAGCCACGGAGGTCAAACTCCGGCTCATCACT
JMFS009D08+ TGTGGGAATGACGGCGTAAAGGGCACCGCAGCCACGGAGGTCAAACTCCGGCTCATCACT
JMFF011N08+ TGTGGGAATGACGGCGTAAAGGGCACCGCAGCCACGGAGGTCAAACTCCGGCTCATCACT
JMFF001J23+ TGTGGGAATGACGGCGTAAAGGGCACCGCAGCCACGGAGGTCAAACTCCGGCTCATCACT
JMSF034G23+ TGTGGGAATGACGGCGTAAAGGGCACCGCAGCCACGGAGGTCAAACTCCGGCTCATCACT
JMSF049I18+ TGTGGGAATGACGGCGTAAAGGGCACCGCAGCCACGGAGGTCAAACTCCGGCTCATCACT
JMFS018D02+ TGTGGGAATGACGGCGTAAAGGGCACCGCAGCCACGGAGGTCAAAATCCGGCTCATCACT
____________________________________________________________
consensus TGTGGGAATGACGGCGTAAAGGGCACCGCAGCCACGGAGGTCAAACTCCGGCTCATCACT
. : . : . : . : . : . :
JMFS087H02+ GGGGCCATTTAGCTCAATACCCAGATGGAGTTTGGGCGTTACTATTGTTTTCCAACGCTT
JMFS009D08+ GGGGCCATTTAGCTCAATACCCAGATGGAGTTTGGGCGTTACTATTGT
JMFF011N08+ GGGGCCATTTAGCTCAATACCCAGATGGAGTTTGGGCGTTACTATTGTTTTCCAACGCTT
JMFF001J23+ GGGGCCATTTAGCTCAATACCCAGATGGAGTTTGGGCGTTACTATTGTTTTCCAACGCTT
JMSF034G23+ GGGGCCATTTAGCTCAATACCCAGATGGAGTTTGGGCGTTACTATTGTTTTCCAACGCTT
JMSF049I18+ GGGGCCATTTAGCTCAATACCCAGATGGAGTTTGGGCGTTACTATTGTTTTCCAACGCTT
JMFS018D02+ GGGGCCATTTAGCTCAATACCCAGATGGAGTTTGGGCGTTACTATTGTTTTCCAACGCTT
____________________________________________________________
consensus GGGGCCATTTAGCTCAATACCCAGATGGAGTTTGGGCGTTACTATTGTTTTCCAACGCTT
. : . : . : . : . : . :
JMFS087H02+ ACAGTGTGAGTATTTTGGT
JMFF011N08+ ACAGTGTGAGTATTTTGGTGGGCAGCTTAAACGGGGAAATGAAGAAGAGT
JMFF001J23+ ACAGTGTGAGTATTTTGGTGGGCAGCTTAAACGGGGAAATGAAGAAGAGT
JMSF034G23+ ACAGTGTGAGTATTTTGGTGGGCAGCTTAAACGGGGAAATGAAGAAGAGT
JMSF049I18+ ACAGTGTGAGTATTTTGGTGGGCAGCTTAAACGGGGAAATGAAGAAGAGTGCGAAAACCC
JMFS018D02+ ACAGTGTGAGTATTTTGGTGGGCAGCTTAAACGGGGAAATGAAGAAGAGTGCGAAAACCC
____________________________________________________________
consensus ACAGTGTGAGTATTTTGGTGGGCAGCTTAAACGGGGAAATGAAGAAGAGTGCGAAAACCC
. : . : . : . : . : . :
JMSF049I18+ TGGAGATGAAAAGTGGGGTTTAAGGAGGAGGCGCCGGAGAGTTCT
JMFS018D02+ TGGAGATGAAAAGTGGGGTTTAAGGAGGAGGCGCCGGAGAGTTCTAGAACTCCCAAATTG
____________________________________________________________
consensus TGGAGATGAAAAGTGGGGTTTAAGGAGGAGGCGCCGGAGAGTTCTAGAACTCCCAAATTG