Contig 008989:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF003E03Sequence603008989 (3)ref|XP_004230541.1|2e-99PREDICTED: methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial688013598 (2)gb|KDO44164.1|5e-118hypothetical protein CISIN_1g0094072mg, partial [Citrus sinensis] gb|KDO44165.1|
JMFS010G06Sequence629008989 (3)ref|XP_004230541.1|5e-70PREDICTED: methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial
JMSF013G10Sequence545008989 (3)ref|XP_004230541.1|9e-57PREDICTED: methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial795013598 (2)ref|XP_007042801.1|3e-111Aldehyde dehydrogenase 6B2 [Theobroma cacao] gb|EOX98632.1| Aldehyde dehydrogena

Alignment

This contig is upended


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JMFF003E03+                                              CTCTTATGCTATAGGTATCAATTCC
                      ____________________________________________________________
consensus                                                CTCTTATGCTATAGGTATCAATTCC
 
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JMFF003E03+           ATTTGAGACATTAGAAACATATTCTCCCATCTGTAAGGTTGCCATCCCACATGCATGTTC
                      ____________________________________________________________
consensus             ATTTGAGACATTAGAAACATATTCTCCCATCTGTAAGGTTGCCATCCCACATGCATGTTC
 
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JMFF003E03+           CACCACCTNTAAGCCACGGAATACATCGCCTTGGGCATCTTTCAATGTCTTCCCCTGTTC
JMFS010G06+                                          TGGGCATCTTTCAATGTCTTCCCCTGTTC
                      ____________________________________________________________
consensus             CACCACCTNTAAGCCACGGAATACATCGCCTTGGGCATCTTTCAATGTCTTCCCCTGTTC
 
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JMFF003E03+           TGTAGTAATATTCAAGGCTAGCTTATCCATGTTCTTCCGTATAAGGTCTTGGTACTTTAA
JMSF013G10+                                         GTTCTTCCGTATAAGGTCTTGGTACTTTAA
JMFS010G06+           TGTAGTAATATTCAAGGCTAGCTTATCCATGTTCTTCCGTATAAGGTCTTGGTACTTTAA
                      ____________________________________________________________
consensus             TGTAGTAATATTCAAGGCTAGCTTATCCATGTTCTTCCGTATAAGGTCTTGGTACTTTAA
 
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JMFF003E03+           CATGACACGCTGCCTTGTCGTGATAGGCGTGTTCTTCCATGATGGATATGCCTTTTTAGC
JMSF013G10+           CATGACACGCTGCCTTGTCGTGATAGGCGTGTTCTTCCATGATGGATATGCCTTTTTAGC
JMFS010G06+           CATGACACGCTGCCTTGTCGTGATAGGCGTGTTCTTCCATGATGGATATGCCTTTTTAGC
                      ____________________________________________________________
consensus             CATGACACGCTGCCTTGTCGTGATAGGCGTGTTCTTCCATGATGGATATGCCTTTTTAGC
 
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JMFF003E03+           AGCAGAAACTGCAGACTTGAACTCCTCATTCGTAGTTAACGGTATCTGAGACACCACTTC
JMSF013G10+           AGCAGAAACTGCAGACTTGAACTCCTCATTCGTAGTTAACGGTATCTGAGACACCACTTC
JMFS010G06+           AGCAGAAACTGCAGACTTGAACTCCTCATTCGTAGTTAACGGTATCTGAGACACCACTTC
                      ____________________________________________________________
consensus             AGCAGAAACTGCAGACTTGAACTCCTCATTCGTAGTTAACGGTATCTGAGACACCACTTC
 
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JMFF003E03+           TTGTGTAGCTGGGTTTATAACATCAATTGATTCCGATGACTTCGAATCTACAAAGCTGCC
JMSF013G10+           TTGTGTAGCTGGGTTTATAACATCAATTGATTCCGATGACTTCGAATCTACAAAGCTGCC
JMFS010G06+           TTGTGTAGCTGGGTTTATAACATCAATTGATTCCGATGACTTCGAATCTACAAAGCTGCC
                      ____________________________________________________________
consensus             TTGTGTAGCTGGGTTTATAACATCAATTGATTCCGATGACTTCGAATCTACAAAGCTGCC
 
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JMFF003E03+           ACCAATCAAATTGGGAAGCCTCGGCGAAGTTCGATGCTTCCACGAGGGCTCAGCTGCGGT
JMSF013G10+           ACCAATCAAATTGGGAAGCCTCGGCGAAGTTCGATGCTTCCACGAGGGCTCAGCTGCGGT
JMFS010G06+           ACCAATCAAATTGGGAAGCCTCGGCGAAGTTCGATGCTTCCACGAGGGCTCAGCTGCGGT
                      ____________________________________________________________
consensus             ACCAATCAAATTGGGAAGCCTCGGCGAAGTTCGATGCTTCCACGAGGGCTCAGCTGCGGT
 
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JMFF003E03+           GGATAAATGAGAATTAGCAAGACAATAAATCTGAGGACTCAAAGACCTCACATTTCTAGC
JMSF013G10+           GGATAAATGAGAATTAGCAAGACAATAAATCTGAGGACTCAAAGACCTCACATTTCTAGC
JMFS010G06+           GGATAAATGAGAATTAGCAAGACAATAAATCTGAGGACTCAAAGACCTCACATTTCTAGC
                      ____________________________________________________________
consensus             GGATAAATGAGAATTAGCAAGACAATAAATCTGAGGACTCAAAGACCTCACATTTCTAGC
 
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JMFF003E03+           TCGATTGACGGCGAACTGCATCATCATTATCCCCGGAAATCTGTGATCGGAATCGATAAA
JMSF013G10+           TCGATTGACGGCGAACTGCATCATCATTATCCCCGGAAATCTGTGATCGGAATCGATAAA
JMFS010G06+           TCGATTGACGGCGAACTGCATCATCATTATCCCCGGAAATCTGTGATCGGAATCGATAAA
                      ____________________________________________________________
consensus             TCGATTGACGGCGAACTGCATCATCATTATCCCCGGAAATCTGTGATCGGAATCGATAAA
 
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JMFF003E03+           GATTTCCCGGAGTCCTCTACCTTGCTTCTCTACTCAAC                      
JMSF013G10+           GATTTCCCGGAGTCCTCTACCTTGCTTCTCTACTCAACTCTCTCACTTGGGTATGTCAAT
JMFS010G06+           GATTTCCCGGAGTCCTCTACCTTGCTTCTCTACTCAACTCTCTCACTTGGGTATGTCAAT
                      ____________________________________________________________
consensus             GATTTCCCGGAGTCCTCTACCTTGCTTCTCTACTCAACTCTCTCACTTGGGTATGTCAAT
 
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JMSF013G10+           TTGGAGTATATAGTAAAAAGAGAGTGAATCAAAAATTACAACTTTGGAAATTTTTTAAAT
JMFS010G06+           TTGGAGTATATAGTAAAAAGAGAGTGAATCAAAAATTACAACTTTGGAAATTTTTTAAAT
                      ____________________________________________________________
consensus             TTGGAGTATATAGTAAAAAGAGAGTGAATCAAAAATTACAACTTTGGAAATTTTTTAAAT
 
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JMSF013G10+           TGGGTATTATCACATTGAGCCGATAAGGATTAAT                          
JMFS010G06+           TGGGTATTATCACATTGAGCCGATAAGGATTAATGAGTTGAAGAACGTGAACTGTTCCAG
                      ____________________________________________________________
consensus             TGGGTATTATCACATTGAGCCGATAAGGATTAATGAGTTGAAGAACGTGAACTGTTCCAG