| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF042A02 | Sequence | 663 | 008988 (11) | ref|XP_010648652.1| | 8e-78 | PREDICTED: cellulose synthase A catalytic subunit 1 [UDP-forming] [Vitis vinife | 627 | 005274 (39) | ref|XP_008392524.1| | 4e-146 | PREDICTED: LOW QUALITY PROTEIN: cellulose synthase A catalytic subunit 1 [UDP-f |
| JMFF042F02 | Sequence | 633 | 008988 (11) | ref|XP_010648652.1| | 5e-70 | PREDICTED: cellulose synthase A catalytic subunit 1 [UDP-forming] [Vitis vinife | 635 | 005274 (39) | ref|XP_008392524.1| | 4e-144 | PREDICTED: LOW QUALITY PROTEIN: cellulose synthase A catalytic subunit 1 [UDP-f |
| JMFF046M02 | Sequence | 546 | 008988 (11) | gb|AGV22109.1| | 1e-53 | cellulose synthase 7 [Betula luminifera] | 612 | 005274 (39) | gb|AGV22109.1| | 4e-111 | cellulose synthase 7 [Betula luminifera] |
| JMFS008C02 | Sequence | 623 | 008988 (11) | ref|XP_010648652.1| | 6e-79 | PREDICTED: cellulose synthase A catalytic subunit 1 [UDP-forming] [Vitis vinife | |||||
| JMFS010B04 | Sequence | 595 | 008988 (11) | ref|XP_010648652.1| | 3e-69 | PREDICTED: cellulose synthase A catalytic subunit 1 [UDP-forming] [Vitis vinife | |||||
| JMFS042D04 | Sequence | 619 | 008988 (11) | ref|XP_010648652.1| | 6e-79 | PREDICTED: cellulose synthase A catalytic subunit 1 [UDP-forming] [Vitis vinife | |||||
| JMFS056H10 | Sequence | 628 | 008988 (11) | emb|CAN60659.1| | 6e-94 | hypothetical protein VITISV_018069 [Vitis vinifera] | |||||
| JMFS077C08 | Sequence | 627 | 008988 (11) | ref|XP_010648652.1| | 3e-81 | PREDICTED: cellulose synthase A catalytic subunit 1 [UDP-forming] [Vitis vinife | |||||
| JMFS089D02 | Sequence | 432 | 008988 (11) | ref|XP_010648652.1| | 4e-69 | PREDICTED: cellulose synthase A catalytic subunit 1 [UDP-forming] [Vitis vinife | |||||
| JMFS093H10 | Sequence | 622 | 008988 (11) | gb|AGV22109.1| | 1e-80 | cellulose synthase 7 [Betula luminifera] | |||||
| JMFS100C11 | Sequence | 593 | 008988 (11) | ref|XP_010648652.1| | 3e-74 | PREDICTED: cellulose synthase A catalytic subunit 1 [UDP-forming] [Vitis vinife | |||||
This contig is upended
. : . : . : . : . : . :
JMFS056H10+ GACTTGAGTGGC
____________________________________________________________
consensus GACTTGAGTGGC
. : . : . : . : . : . :
JMFS056H10+ CATGCCTGTCACCAGGACCCAAAGGTCCTGAGATGCTCCTTACAGATTGAGTATCTGGTG
____________________________________________________________
consensus CATGCCTGTCACCAGGACCCAAAGGTCCTGAGATGCTCCTTACAGATTGAGTATCTGGTG
. : . : . : . : . : . :
JMFF042A02+ GAGAAGAGGTATTGGCT
JMFS056H10+ TAGCACTTGGAGGGATTTCACCAGAAATAGGCTGACCATTCATGAGAAGAGGTATTGGCT
JMFS093H10+ CTGACCATTCATGAGAAGAGGTATTGGCT
JMFS077C08+ AGGCTGACCATTCATGAGAAGAGGTATTGGCT
JMFS042D04+ CATTCATGAGAAGAGGTATTGGCT
JMFS089D02+ GCT
JMFS008C02+ CATTCATGAGAAGAGGTATTGGCT
____________________________________________________________
consensus TAGCACTTGGAGGGATTTCACCAGAAATAGGCTGACCATTCATGAGAAGAGGTATTGGCT
. : . : . : . : . : . :
JMFF042A02+ GCTGAGACTCATGCCTTGTAGAAGAAGAGAGATCCACATCTTCTCCCTGCCACTGGTGTC
JMFS056H10+ GCTGAGACTCATGCCTTGTAGAAGAAGAGAGATCCACATCTTCTCCCTGCCACTGGTGTC
JMFS100C11+ GCTGAGACTCATGCCTTGTAGAAGAAGAGAGATCCACATCTTCTCCCTGCCACTGGTGTC
JMFS093H10+ GCTGAGACTCATGCCTTGTAGAAGAAGAGAGATCCACATCTTCTCCCTGCCACTGGTGTC
JMFS077C08+ GCTGAGACTCATGCCTTGTAGAAGAAGAGAGATCCACATCTTCTCCCTGCCACTGGTGTC
JMFS042D04+ GCTGAGACTCATGCCTTGTAGAAGAAGAGAGATCCACATCTTCTCCCTGCCACTGGTGTC
JMFF042F02+ GAGACTCATGCC-TGTAGAAGAAGAGAGATCCACATCTTCTCCCTGCCACTGGTGTC
JMFS089D02+ GCTGAGACTCATGCCTTG-AGAAGAAGAGAGATCCACATCTTCTCCCTGCCACTGGTGTC
JMFS008C02+ GCTGAGACTCATGCCTTGTAGAAGAAGAGAGATCCACATCTTCTCCCTGCCACTGGTGTC
JMFS010B04+ AGAAGAGAGATCCACATCTTCTCCCTGCCACTGGTGTC
____________________________________________________________
consensus GCTGAGACTCATGCCTTGTAGAAGAAGAGAGATCCACATCTTCTCCCTGCCACTGGTGTC
. : . : . : . : . : . :
JMFF042A02+ TAGCCTTGCTATTCCCCTGGGCATGATTAAACTCATCATTCAGGTCATCAGAATAATCTT
JMFS056H10+ TAGCCTTGCTATTCCCCTGGGCATGATTAAACTCATCATCCAGGTCATCAGAATAATCTT
JMFS100C11+ TAGCCTTGCTATTCCCCTGGGCATGATTAAACTCATCATCCAGGTCATCAGAATAATCTT
JMFS093H10+ TAGCCTTGCTATTCCCCTGGGCATGATTAAACTCATCATCCAGGTCATCAGAATAATCTT
JMFS077C08+ TAGCCTTGCTATTCCCCTGGGCATGATTAAACTCATCATCCAGGTCATCAGAATAATCTT
JMFS042D04+ TAGCCTTGCTATTCCCCTGGGCATGATTAAACTCATCATCCAGGTCATCAGAATAATCTT
JMFF046M02+ CTCATCATTCAGGTCATCAGAATAATCTT
JMFF042F02+ TAGCCTTGCTATTCCCCTGGGCATGATTAAACTCATCATTCAGGTCATCAGAATAATCTT
JMFS089D02+ TAGCCTTGCTATTCCCCTGGGCATGATTAAACTCATCATCCAGGTCATCAGAATAATCTT
JMFS008C02+ TAGCCTTGCTATTCCCCTGGGCATGATTAAACTCATCATCCAGGTCATCAGAATAATCTT
JMFS010B04+ TAGCCTTGCTATTCCCCTGGGCATGATTAAACTCATCATCCAGGTGATCAGAATAATCTT
____________________________________________________________
consensus TAGCCTTGCTATTCCCCTGGGCATGATTAAACTCATCATCCAGGTCATCAGAATAATCTT
. : . : . : . : . : . :
JMFF042A02+ CCTCATCATCCCCATCAACCCGTGGACTCCCTTTTTGTCTCTTGTATCTAGTTTTGCACT
JMFS056H10+ CCTCATCATCCCCATCAACCCGTGGACTCCCTTTTTGTCTCTTGTATCTAGTTTTGCACT
JMFS100C11+ CCTCATCATCCCCATCAACCCGTGGACTCCCTTTTTGTCTCTTGTATCTAGTTTTGCACT
JMFS093H10+ CCTCATCATCCCCATCAACCCGTGGACTCCCTTTTTGTCTCTTGTATCTAGTTTTGCACT
JMFS077C08+ CCTCATCATCCCCATCAACCCGTGGACTCCCTTTTTGTCTCTTGTATCTAGTTTTGCACT
JMFS042D04+ CCTCATCATCCCCATCAACCCGTGGACTCCCTTTTTGTCTCTTGTATCTAGTTTTGCACT
JMFF046M02+ CCTCATCATCCCCATCAACCCGTGGACTCCCTTTTTGTCTCTTGTATCTAGTTTGCACNT
JMFF042F02+ CCTCATCATCCCCATCAACCCGTGGACTCCCTTTTTGTCTCTTGTATCTAGTTTTGCACT
JMFS089D02+ CCTCATCATCCCCATCAACCCGTGGACTCCCTTTTTGTCTCTTGTATCTAGTTTTGCACT
JMFS008C02+ CCTCATCATCCCCATCAACCCGTGGACTCCCTTTTTGTCTCTTGTATCTAGTTTTGCACT
JMFS010B04+ CCTCATCATCCCCATCAACCCGTGGACTCCCTTTTTGTCTCTTGTATCTAGTTTTGCACT
____________________________________________________________
consensus CCTCATCATCCCCATCAACCCGTGGACTCCCTTTTTGTCTCTTGTATCTAGTTTTGCACT
. : . : . : . : . : . :
JMFF042A02+ GGGGACATGCTTGATTTCCATCTTTGCGCTCATACTCATAACAAGGCCGGCAAACAGGGA
JMFS056H10+ GGGGACATGCTTGATTTCCATCTTTGCGCTCATACTCATAACAAGGCCGGCAAACAGGGA
JMFS100C11+ GGGGACATGCTTGATTTCCATCTTTGCGCTCATACTCATAACAAGGCCGGCAAACAGGGA
JMFS093H10+ GGGGACATGCTTGATTTCCATCTTTGCGCTCATACTCATAACAAGGCCGGCAAACAGGGA
JMFS077C08+ GGGGACATGCTTGATTTCCATCTTTGCGCTCATACTCATAACAAGGCCGGCAAACAGGGA
JMFS042D04+ GGGGACATGCTTGATTTCCATCTTTGCGCTCATACTCATAACAAGGCCGGCAAACAGGGA
JMFF046M02+ GGGGACATGCTTGATTTCCATCTTTGCGCTCATACTCATAACAAGGCCGGCAAACAGGGA
JMFF042F02+ GGGGACATGCTTGATTTCCATCTTTGCGCTCATACTCATAACAAGGCCGGCAAACAGGGA
JMFS089D02+ GGGGACATGCTTGATTTCCATCTTTGCGCTCATACTCATAACAAGGCCGGCAAACAGGGA
JMFS008C02+ GGGGACATGCTTGATTTCCATCTTTGCGCTCATACTCATAACAAGGCCGGCAAACAGGGA
JMFS010B04+ GGGGACATGCTTGATTTCCATCTTTGCGCTCATACTCATAACAAGGCCGGCAAACAGGGA
____________________________________________________________
consensus GGGGACATGCTTGATTTCCATCTTTGCGCTCATACTCATAACAAGGCCGGCAAACAGGGA
. : . : . : . : . : . :
JMFF042A02+ AGGCACACTCATTACACGCAACAAATGCATCACCACTAGCAGTCACCCCAACAGCATCAC
JMFS056H10+ AGGCACACTCATTACACGCAACAAATGCATCACCACTAGCAGTCACCCCAACAGCATCAC
JMFS100C11+ AGGCACACTCATTACACGCAACAAATGCATCACCACTAGCAGTCACCCCAACAGCATCAC
JMFS093H10+ AGGCACACTCATTACACGCAACAAATGCATCACCACTAGCAGTCACCCCAACAGCATCAC
JMFS077C08+ AGGCACACTCATTACACGCAACAAATGCATCACCACTAGCAGTCACCCCAACAGCATCAC
JMFS042D04+ AGGCACACTCATTACACGCAACAAATGCATCACCACTAGCAGTCACCCCAACAGCATCAC
JMFF046M02+ AGGCACACTCATTACACGCAACAAATGCATCACCACTAGCAGTCACCCCAACAGCATCAC
JMFF042F02+ AGGCACACTCATTACACGCAACAAATGCATCACCACTAGCAGTCACCCCAACAGCATCAC
JMFS089D02+ AGGCACACTCATTACACGCAACAAATGCATCACCACTAGCAGTCACCCCAACAGCATCAC
JMFS008C02+ AGGCACACTCATTACACGCAACAAATGCATCACCACTAGCAGTCACCCCAACAGCATCAC
JMFS010B04+ AGGCACACTCATTACACGCAACAAATGCATCACCACTAGCAGTCACCCCAACAGCATCAC
____________________________________________________________
consensus AGGCACACTCATTACACGCAACAAATGCATCACCACTAGCAGTCACCCCAACAGCATCAC
. : . : . : . : . : . :
JMFF042A02+ CACAAATCTGACATATCTGACTATTCAGATCCTTAAGGGGTTTTGGCGCACTATCAGAAT
JMFS056H10+ CACAAATCTGACATATCTGACTATTCAGATCCTTAAGGGGTTTTGGCGCACTATCAGAAT
JMFS100C11+ CACAAATCTGACATATCTGACTATTCAGATCCTTAAGGGGTTTTGGCGCACTATCAGAAT
JMFS093H10+ CACAAATCTGACATATCTGACTATTCAGATCCTTAAGGGGTTTTGGCGCACTATCAGAAT
JMFS077C08+ CACAAATCTGACATATCTGACTATTCAGATCCTTAAGGGGTTTTGGCGCACTATCAGAAT
JMFS042D04+ CACAAATCTGACATATCTGACTATTCAGATCCTTAAGGGGTTTTGGCGCACTATCAGAAT
JMFF046M02+ CACAAATCTGACATATCTGACTATTCAGATCCTTAAGGGGTTTTGGCGCACTATCAGAAT
JMFF042F02+ CACAAATCTGACATATCTGACTATTCAGATCCTTAAGGGGTTTTGGCGCACTATCAGAAT
JMFS089D02+ CACAAATCTGACATATCTGACTATTCAGATCCTTAAGGGGTTTTGGCGCACTATCAGAAT
JMFS008C02+ CACAAATCTGACATATCTGACTATTCAGATCCTTAAGGGGTTTTGGCGCACTATCAGAAT
JMFS010B04+ CACAAATCTGACATATCTGACTATTCAGATCCTTAAGGGGTTTTGGCGCACTATCAGAAT
____________________________________________________________
consensus CACAAATCTGACATATCTGACTATTCAGATCCTTAAGGGGTTTTGGCGCACTATCAGAAT
. : . : . : . : . : . :
JMFF042A02+ CATGGCGGATTTGAACCAGCTCATTCCGTTTGTGCGATCCGGCAACCATCCCAGCACCGG
JMFS056H10+ CATGGCGGATTTGAACCAGCTCATTCCGTTTGTGCGATCCGGCAACCATCCCAGCACCGG
JMFS100C11+ CATGGCGGATTTGAACCAGCTCATTCCGTTTGTGCGATCCGGCAACCATCCCAGCACCGG
JMFS093H10+ CATGGCGGATTTGAACCAGCTCATTCCGTTTGTGCGATCCGGCAACCATCCCAGCACCGG
JMFS077C08+ CATGGCGGATTTGAACCAGCTCATTCCGTTTGTGCGATCCGGCAACCATCCCAGCACCGG
JMFS042D04+ CATGGCGGATTTGAACCAGCTCATTCCGTTTGTGCGATCCGGCAACCATCCCAGCACCGG
JMFF046M02+ CATGGCGGATTTGAACCAGCTCATTCCGTTTGTGCGATCCGGCAACCATCCCAGCACCGG
JMFF042F02+ CATGGCGGATTTGAACCAGCTCATTCCGTTTGTGCGATCCGGCAACCATCCCAGCACCGG
JMFS089D02+ CATGGCGGATTTGAACCAGCTCATTCCGTTTGTGCGATCCGGCAACCATCCCAGCACCGG
JMFS008C02+ CATGGCGGATTTGAACCAGCTCATTCCGTTTGTGCGATCCGGCAACCATCCCAGCACCGG
JMFS010B04+ CATGGCGGATTTGAACCAGCTCATTCCGTTTGTGCGATCCGGCAACCATCCCAGCACCGG
____________________________________________________________
consensus CATGGCGGATTTGAACCAGCTCATTCCGTTTGTGCGATCCGGCAACCATCCCAGCACCGG
. : . : . : . : . : . :
JMFF042A02+ CCTCCATTTCTTC
JMFS056H10+ CCTCCATTTCTTCCCCGAGAAACAGAGGACTTCACTTCACCGCAATTATTTCTGATGAAT
JMFS100C11+ CCTCCATTTCTTCCCCGAGAAACAGAGGACTTCACTTCACCGCAATTATTTCTGATGAAT
JMFS093H10+ CCTCCATTTCTTCCCCGAGAAACAGAGGACTTCACTTCACCGCAATTATTTCTGATGAAT
JMFS077C08+ CCTCCATTTCTTCCCCGAGAAACAGAGGACTTCACTTCACCGCAATTATTTCTGATGAAT
JMFS042D04+ CCTCCATTTCTTCCCCGAGAAACAGAGGACTTCACTTCACCGCAATTATTTCTGATGAAT
JMFF046M02+ CCTCCATTTCTTCCCCGAGAAACAGAGGACTTCACTTCACCGCAATTATTTCTGATGAAT
JMFF042F02+ CCTCCATTTCTTCCCCGAGAAACAGAGGACTTCACTTCACCGCAATTATTTCTGATGAAT
JMFS089D02+ CCTCCATTTC
JMFS008C02+ CCTCCATTTCTTCCCCGAGAAACAGAGGACTTCACTTCACCGCAATTATTTCTGATGAAT
JMFS010B04+ CCTCCATTTCTTCCCCGAGAAACAGAGGACTTCACTTCACCGCAATTATTTCTGATGAAT
____________________________________________________________
consensus CCTCCATTTCTTCCCCGAGAAACAGAGGACTTCACTTCACCGCAATTATTTCTGATGAAT
. : . : . : . : . : . :
JMFS056H10+ TACAACAGCAATGCGG
JMFS100C11+ TACAACAGCAATGCGGATTCAAAATTGTGGGATGATTAGATCATTGATGTTAATGGGGAC
JMFS093H10+ TACAACAGCAATGCGGATTCAAAATTGTGGGATGATTAGATCATTGATGTTAATGGGGAC
JMFS077C08+ TACAACAGCAATGCGGATTCAAAATTGTGGGATGATTAGATCATTGATGTTAATGGGGAC
JMFS042D04+ TACAACAGCAATGCGGATTCAAAATTGTGGGATGATTAGATCATTGATGTTAATGGGGAC
JMFF046M02+ TACAACAG-AATGCGGATTCAAAATTGTGGGATGATTAGATCATTGATGTTAATGGGGAC
JMFF042F02+ TACAACAG-AATGCGGATTCAAAATTGTGGGATGATTAGATCATTGATGTTAATGGGGAC
JMFS008C02+ TACAACAGCAATGCGGATTCAAAATTGTGGGATGATTAGATCATTGATGTTAATGGGGAC
JMFS010B04+ TACAACAGCAATGCGGATTCAAAATTGTGGGATGATTAGATCATTGATGTTAATGGGGAC
____________________________________________________________
consensus TACAACAGCAATGCGGATTCAAAATTGTGGGATGATTAGATCATTGATGTTAATGGGGAC
. : . : . : . : . : . :
JMFS100C11+ TAAATAAATAAATCGCGATCTTCTTCTGGGTCTATCAGAAGAGAAGAGAAAGA
JMFS093H10+ TAAATAAATAAATCGCGATCTTCTTCTGGGTCTATCAGAAGAGAAGAGAAAGA
JMFS077C08+ TAAATAAATAAATCGCGATCTTCTTCTGGGTCTATCAGAAGAGAAGAGAAAGAGA
JMFS042D04+ TAAATAAATAAATCGCGATCTTCTTCTGGGTCTATCAGAAGAGAAGAGAAAGAGA
JMFF046M02+ TAAATAAATAAATCGCGATCT
JMFF042F02+ TAAATAAATAAATCGCGATCT
JMFS008C02+ TAAATAAATAAATCGCGATCTTCTTCTGGGTCTATCAGAAGAGAAGAGAAAGAGAGAAG
JMFS010B04+ TAAATAAATAAATCGCGATCTTCTTCTGGGTCTATCAGAAGAGAAGAGAAAGAGAGAAGG
____________________________________________________________
consensus TAAATAAATAAATCGCGATCTTCTTCTGGGTCTATCAGAAGAGAAGAGAAAGAGAGAAGG