Contig 008985:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF037E16+                                                                     CA
                      ____________________________________________________________
consensus                                                                       CA
 
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JMSF037E16+           CCCATAAGAACAAATTATATCAGNTAAGGCAGTCATTTGGTAGGAATCACTCTGTGTCAT
                      ____________________________________________________________
consensus             CCCATAAGAACAAATTATATCAGNTAAGGCAGTCATTTGGTAGGAATCACTCTGTGTCAT
 
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JMSF037E16+           CCGAACAAAATAAGGGAATTGGAAAGCAGAGAGAGTTGGATCACTTGCAGCAAATGAGAC
JMFS010D12+                                                         GCAGCAAATGAGAC
JMFS009E02+                                                                      C
                      ____________________________________________________________
consensus             CCGAACAAAATAAGGGAATTGGAAAGCAGAGAGAGTTGGATCACTTGCAGCAAATGAGAC
 
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JMSF037E16+           AAGAGGCACATGAAGATCATTAGCAATAAAAGATATCATATGAGCTATTGCTGAAGACTG
JMFS010D12+           AAGAGGCACATGAAGATCATTAGCAATAAAAGATATCATATGAGCTATTGCTGAAGACTG
JMFS009E02+           AAGAGGCACATGAAGATCATTAGCAATAAAGGATATCATATGAGCTATTGCTGAAGACTG
                      ____________________________________________________________
consensus             AAGAGGCACATGAAGATCATTAGCAATAAAAGATATCATATGAGCTATTGCTGAAGACTG
 
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JMSF037E16+           TGGACCTATTATTGTCACCACTTCCTTCCCAATCAGCTGAAATGCTCCAATGGAAGCCAA
JMFS010D12+           TGGACCTATTATTGTCACCACTTCCTTCCCAATCAGCTGAAATGCTCCAATGGAAGCCAA
JMFS009E02+           TGGACCTATTATTGTCACCACTTCCTTCCCAATCAGCTGAAATGCTCCAATGGAAGCCAA
                      ____________________________________________________________
consensus             TGGACCTATTATTGTCACCACTTCCTTCCCAATCAGCTGAAATGCTCCAATGGAAGCCAA
 
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JMSF037E16+           AAAGCCACTGCAATTGGAATCCACCGGAATCAAGTTGAGCTTAGTCCCTGGCAGAATACT
JMFS010D12+           AAAGCCACTGCAATTGGAATCCACCGGAATCAAGTTGAGCTTAGTCCCTGGCAGAATACT
JMFS009E02+           AAAGCCACTGCAATTGGAATCCACCGGAATCAAGTTGAGCTTAGTCCCTGGCAGAATACT
                      ____________________________________________________________
consensus             AAAGCCACTGCAATTGGAATCCACCGGAATCAAGTTGAGCTTAGTCCCTGGCAGAATACT
 
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JMSF037E16+           GGGATCCCCGTTGATATCAGTGACTGCAATATCCATTGCAGCCTTTGCCGCCCTCCCAAT
JMFS010D12+           GGGATCCCCGTTGATATCAGTGACTGCAATATCCATTGCAGCCTTTGCCGCCCTCCCAAT
JMFS009E02+           GGGATCCCCGTTGATATCAGTGACTGCAATATCCATTGCAGCCTTTGCCGCCCTCCCAAT
                      ____________________________________________________________
consensus             GGGATCCCCGTTGATATCAGTGACTGCAATATCCATTGCAGCCTTTGCCGCCCTCCCAAT
 
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JMSF037E16+           GATTGAATTGAAAGTGAACACAGACCCAACATTCACAACCGCAGGCTTTTCACACTCCAC
JMFS010D12+           GATTGAATTGAAAGTGAACACAGACCCAACATTCACAACCGCAGGCTTTTCACACTCCAC
JMFS009E02+           GATTGAATTGAAAGTGAACACAGACCCAACATTCACAACCGCAGGCTTTTCACACTCCAC
                      ____________________________________________________________
consensus             GATTGAATTGAAAGTGAACACAGACCCAACATTCACAACCGCAGGCTTTTCACACTCCAC
 
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JMSF037E16+           AATTCCTATACTCGACACCAAACTCAGAGCTAGTGCCACCACCCCAAGAAGCCTCATTCT
JMFS010D12+           AATTCCTATACTCGACACCAAACTCAGAGCTAGTGCCACCACCCCAAGAAGCCTCATTCT
JMFS009E02+           AATTCCTATACTCGACACCAAACTCAGAGCTAGTGCCACCACCCCAAGAAGCCTCATTCT
                      ____________________________________________________________
consensus             AATTCCTATACTCGACACCAAACTCAGAGCTAGTGCCACCACCCCAAGAAGCCTCATTCT
 
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JMSF037E16+           TGGAGCCTCAAAAAGGCAAAAACAACAAGAACTGGGATACGATGTTCTGCTCAAGAAACT
JMFS010D12+           TGGAGCCTCAAAAAGGCAAAAACAACAAGAACTGGGATACGATGTTCTGCTCAAGAAACT
JMFS009E02+           TGGAGCCTCAAAAAGGCAAAAACAACAAGAACTGGGATACGATGTTCTGCTCAAGAAACT
                      ____________________________________________________________
consensus             TGGAGCCTCAAAAAGGCAAAAACAACAAGAACTGGGATACGATGTTCTGCTCAAGAAACT
 
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JMSF037E16+           ATATATGGTTGTGGAATTTGAACGAAGTAGCATGGAAAGTTTCACGTGTGAAACGGTGCG
JMFS010D12+           ATATATGGTTGTGGAATTTGAACGAAGTAGCATGGAAAGTTTCACGTGTGAAACGGTGCG
JMFS009E02+           ATATATGGTTGTGGAATTTGAACGAAGTAGCATGGAAAGTTTCACGTGTGAAACGGTGCG
                      ____________________________________________________________
consensus             ATATATGGTTGTGGAATTTGAACGAAGTAGCATGGAAAGTTTCACGTGTGAAACGGTGCG
 
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JMSF037E16+           AGAAACTACGCAGCCACCCACTTGATACACAAGTCTGAAATTGAGAAAAACA        
JMFS010D12+           AGAAACTACGCAGCCACCCACTTGATACACAAGTCTGAAATTGAGAAAAACATGGCGTCT
JMFS009E02+           AGAAACTACGCAGCCACCCACTTGATACACAAGTCTGAAATTGAGAAAAACATGGCGTCT
                      ____________________________________________________________
consensus             AGAAACTACGCAGCCACCCACTTGATACACAAGTCTGAAATTGAGAAAAACATGGCGTCT
 
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JMFS010D12+           GACCACAGTCAAGCAGCCCTATACTGTGGACTGGAGTCTGTAGTA               
JMFS009E02+           GACCACAGTCAAGCAGCCCTATACTGTGGACTGGAGTCTGTAGTAGTAGCCTGTGAGAGA
                      ____________________________________________________________
consensus             GACCACAGTCAAGCAGCCCTATACTGTGGACTGGAGTCTGTAGTAGTAGCCTGTGAGAGA