Contig 008984:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS008D04Sequence616008984 (2)emb|CDP14890.1|4e-78unnamed protein product [Coffea canephora]
JMFS071C01Sequence615008984 (2)ref|XP_009777758.1|1e-78PREDICTED: uncharacterized protein LOC104227244 isoform X2 [Nicotiana sylvestri

Alignment

This contig is upended


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JMFS071C01+                                                                 TCACAA
                      ____________________________________________________________
consensus                                                                   TCACAA
 
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JMFS071C01+           AGATGAGATGAAATTCCACCATATGTATCTTCAAATCCAAACTGATTAACATTAAGAGAT
                      ____________________________________________________________
consensus             AGATGAGATGAAATTCCACCATATGTATCTTCAAATCCAAACTGATTAACATTAAGAGAT
 
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JMFS071C01+           TCTGCGTCTTTTAGAACACTTGAAATGGCTTCAATCTCAAACCTGTAGTTGGTACTAGTA
                      ____________________________________________________________
consensus             TCTGCGTCTTTTAGAACACTTGAAATGGCTTCAATCTCAAACCTGTAGTTGGTACTAGTA
 
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JMFS071C01+           GCCTCATGATGACTTTCCATGAGTTCATCTCGCCGCTTCTTCAAGGCAATATCATAACTT
                      ____________________________________________________________
consensus             GCCTCATGATGACTTTCCATGAGTTCATCTCGCCGCTTCTTCAAGGCAATATCATAACTT
 
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JMFS071C01+           CGGCGGACAAAATCTATTGTGTGCTCCCTTTTCTTACCCTCTTCTAAACAGAGATCTTCT
                      ____________________________________________________________
consensus             CGGCGGACAAAATCTATTGTGTGCTCCCTTTTCTTACCCTCTTCTAAACAGAGATCTTCT
 
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JMFS071C01+           ACCACCTGTAAAGCCTCCTCATAATTTAAATGCTCACATTTTCTCTCACACAAGCCCTGA
                      ____________________________________________________________
consensus             ACCACCTGTAAAGCCTCCTCATAATTTAAATGCTCACATTTTCTCTCACACAAGCCCTGA
 
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JMFS071C01+           AGTTCATAAAATTCCTTCTCAAGTAATCTTACAATTTCCATAGCCTGTTGGGCTTTCTCT
                      ____________________________________________________________
consensus             AGTTCATAAAATTCCTTCTCAAGTAATCTTACAATTTCCATAGCCTGTTGGGCTTTCTCT
 
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JMFS071C01+           TCTCTTGAACGTGACCAGGATGTCAACTGCTCGCCACTTGATGTGCCCATAAATATCCAT
JMFS008D04+                                                       GCCCATAAATATCCAT
                      ____________________________________________________________
consensus             TCTCTTGAACGTGACCAGGATGTCAACTGCTCGCCACTTGATGTGCCCATAAATATCCAT
 
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JMFS071C01+           GATAACAATTCATCAGAATCAAGTAAGCCTCCATTGTCACATTGGATATTAGAAGAAATT
JMFS008D04+           GATAACAATTCATCAGAATCAAGTAAGCCTCCATTGTCACATTGGATATTAGAAGAAATT
                      ____________________________________________________________
consensus             GATAACAATTCATCAGAATCAAGTAAGCCTCCATTGTCACATTGGATATTAGAAGAAATT
 
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JMFS071C01+           GCTGCAGAATTAGGATTAGAATCAGTAACAACTCCATCATGAAACGTGATGGGAGTAAGC
JMFS008D04+           GCTGCAGAATTAGGATTAGAATCAGTAACAACTCCATCATGAAACGTGATGGGAGTAAGC
                      ____________________________________________________________
consensus             GCTGCAGAATTAGGATTAGAATCAGTAACAACTCCATCATGAAACGTGATGGGAGTAAGC
 
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JMFS071C01+           TTGCATGGCTTGAAATGCTCGTCAAACAATAAACATGAACCATCCTCGCTGAAAACTATT
JMFS008D04+           TTGCATGGCTTGAAATGCTCGTCAAACAATAAACATGAACCATCCTCGCTGAAAACTATT
                      ____________________________________________________________
consensus             TTGCATGGCTTGAAATGCTCGTCAAACAATAAACATGAACCATCCTCGCTGAAAACTATT
 
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JMFS071C01+           TTCTCCATA                                                   
JMFS008D04+           TTCTCCATAGCATCAACTCCCTGAATGCCAGTACTAATATCATCTATGGCAGTACTTCTC
                      ____________________________________________________________
consensus             TTCTCCATAGCATCAACTCCCTGAATGCCAGTACTAATATCATCTATGGCAGTACTTCTC
 
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JMFS008D04+           TCAGGATACCTACCGAGACCACAAGAATGAGAAAGCTCCTGAAGAAATTTCAGAATTTTC
                      ____________________________________________________________
consensus             TCAGGATACCTACCGAGACCACAAGAATGAGAAAGCTCCTGAAGAAATTTCAGAATTTTC
 
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JMFS008D04+           TTAAGTTCTGGAGCACCCAAAAAACAAATACACAAGGGAGTTTGATCAATATTGTAGTTG
                      ____________________________________________________________
consensus             TTAAGTTCTGGAGCACCCAAAAAACAAATACACAAGGGAGTTTGATCAATATTGTAGTTG
 
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JMFS008D04+           AGCAGCTGAGATCCATAACCAAGACTCTGGAGCTCCTCTACTGCAAAATGTATAACCTTG
                      ____________________________________________________________
consensus             AGCAGCTGAGATCCATAACCAAGACTCTGGAGCTCCTCTACTGCAAAATGTATAACCTTG
 
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JMFS008D04+           CTCAGATGACTAGAACCAAGATATTTGTTTTTAATCAGTGTTTGGAATACAACATTTATC
                      ____________________________________________________________
consensus             CTCAGATGACTAGAACCAAGATATTTGTTTTTAATCAGTGTTTGGAATACAACATTTATC
 
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JMFS008D04+           CTTTCAAGAAGCTTTGCACGTTCAGGGTCATCGGCTATTGGCCAGCTTTCAGAGGGAGGA
                      ____________________________________________________________
consensus             CTTTCAAGAAGCTTTGCACGTTCAGGGTCATCGGCTATTGGCCAGCTTTCAGAGGGAGGA
 
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JMFS008D04+           CAAATCTTAGTGCCTTCATTGCCATCACGGTCCATCCAAACTTCCGAGTTCTTATCATAT
                      ____________________________________________________________
consensus             CAAATCTTAGTGCCTTCATTGCCATCACGGTCCATCCAAACTTCCGAGTTCTTATCATAT