Contig 008979:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS153G10+                                                  GTTTGTAGACATGTTCTTTTC
                      ____________________________________________________________
consensus                                                    GTTTGTAGACATGTTCTTTTC
 
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JMFS153G10+           TTTTCCATTTCAGCAACTTTGATTCTGAAAAAGCTTCAAGTTCATCCGCCTTCTTCTTTG
                      ____________________________________________________________
consensus             TTTTCCATTTCAGCAACTTTGATTCTGAAAAAGCTTCAAGTTCATCCGCCTTCTTCTTTG
 
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JMFS153G10+           AATCGGTAAGAAGACACTCAAGTTCCATTATCTTATTCCCTAACTCGATTCTCATTTTCT
                      ____________________________________________________________
consensus             AATCGGTAAGAAGACACTCAAGTTCCATTATCTTATTCCCTAACTCGATTCTCATTTTCT
 
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JMFS153G10+           CTAAATGTGTTTCCAATTGCAAGCATTTCCCTTCATATGTCTTTTTGCACAGCTCTAACT
                      ____________________________________________________________
consensus             CTAAATGTGTTTCCAATTGCAAGCATTTCCCTTCATATGTCTTTTTGCACAGCTCTAACT
 
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JMFS153G10+           CATGGTTTAGTGAAGAAATCTGCATTTCATGATGATCTTTATCTTTCTGCAACATACAAA
                      ____________________________________________________________
consensus             CATGGTTTAGTGAAGAAATCTGCATTTCATGATGATCTTTATCTTTCTGCAACATACAAA
 
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JMFS153G10+           TTATCTGCTCCCTGTGTTTCTCTTTCTCCTCCGATTTAGCCTTCTCAATCTCATGTTCTT
JMFS154D04+                                                                      T
                      ____________________________________________________________
consensus             TTATCTGCTCCCTGTGTTTCTCTTTCTCCTCCGATTTAGCCTTCTCAATCTCATGTTCTT
 
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JMFS153G10+           CAGCAGCTCCTGTTCTAAGAGCCTCATATGCTCTATCTTTTAATTGATATTTTTGTTCGC
JMFS154D04+           CAGCAGCTCCTGTTCTAAGAGCCTCATATGCTCTATCTTTTAATTGATATTTTTGTTCGC
                      ____________________________________________________________
consensus             CAGCAGCTCCTGTTCTAAGAGCCTCATATGCTCTATCTTTTAATTGATATTTTTGTTCGC
 
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JMFS153G10+           GAGACTTGTAGGAGTTATGTTGCTTTCTCAGATTTTCAGATTGCTTTGAAACACGTTGCT
JMFS154D04+           GAGACTTGTAGGAGTTATGTTGCTTTCTCAGATTTTCAGATTGCTTTGAAACACGTTGCT
JMFS111C02+                                              TCAGATTGCTTTGAAACACGTTGCT
                      ____________________________________________________________
consensus             GAGACTTGTAGGAGTTATGTTGCTTTCTCAGATTTTCAGATTGCTTTGAAACACGTTGCT
 
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JMFS153G10+           CAATTTCTTGCAGAACTAGCTTTAGCAGAGATGAAACACACTGAGGAATATCCCCATTCT
JMFS154D04+           CAATTTCTTGCAGAACTAGCTTTAGCAGAGATGAAACACACTGAGGAATATCCCCATTCT
JMFS111C02+           CAATTTCTTGCAGAACTAGCTTTAGCAGAGATGAAACACACTGAGGAATATCCCCATTCT
JMFS003G08+                        AACTAGCTTTAGCAGAGATGAAACACACTGAGGAATATCCCCATTCT
                      ____________________________________________________________
consensus             CAATTTCTTGCAGAACTAGCTTTAGCAGAGATGAAACACACTGAGGAATATCCCCATTCT
 
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JMFS153G10+           TTCTCTCAATGTTTTCATTTAGAATGTCACCCACAGCACTGAACAATAACCGAGTGGAAG
JMFS154D04+           TTCTCTCAATGTTTTCATTTAGAATGTCACCCACAGCACTGAACAATAACCGAGTGGAAG
JMFS111C02+           TTCTCTCAATGTTTTCATTTAGAATGTCACCCACAGCACTGAACAATAACCGAGTGGAAG
JMFS003G08+           TTCTCTCAATGTTTTCATTTAGAATGTCACCCACAGCACTGAACAATAACCGAGTGGAAG
                      ____________________________________________________________
consensus             TTCTCTCAATGTTTTCATTTAGAATGTCACCCACAGCACTGAACAATAACCGAGTGGAAG
 
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JMFS153G10+           CACTCTCCAAACTTTTTTGTTTCATCAGTTCTGAAATCTTGTAAGCTAGGATGTCTTCA 
JMFS154D04+           CACTCTCCAAACTTTTTTGTTTCATCAGTTCTGAAATCTTGTAAGCTAGGATGTCTTCAC
JMFS111C02+           CACTCTCCAAACTTTTTTGTTTCATCAGTTCTGAAATCTTGTAAGCTAGGATGTCTTCAC
JMFS003G08+           CACTCTCCAAACTTTTTTGTTTCATCAGTTCTGAAATCTTGTAAGCTAGGATGTCTTCAC
                      ____________________________________________________________
consensus             CACTCTCCAAACTTTTTTGTTTCATCAGTTCTGAAATCTTGTAAGCTAGGATGTCTTCAC
 
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JMFS154D04+           AGCCAATCTTCAACTGGAACACATCAGGGAGCTTACTCCCAGCATGATTATTTGATGCAG
JMFS111C02+           AGCCAATCTTCAACTGGAACACATCAGGGAGCTTACTCCCAGCATGATTATTTGATGCAG
JMFS003G08+           AGCCAATCTTCAACTGGAACACATCAGGGAGCTTACTCCCAGCATGATTATTTGATGCAG
                      ____________________________________________________________
consensus             AGCCAATCTTCAACTGGAACACATCAGGGAGCTTACTCCCAGCATGATTATTTGATGCAG
 
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JMFS154D04+           ATAGTTCTTTAGCCATATTGTTGAAACAGTCTATCTGCTCAGAAGCATTAAAGCTACGAA
JMFS111C02+           ATAGTTCTTTAGCCATATTGTTGAAACAGTCTATCTGCTAAGAAGCATTAAAGCTACGAA
JMFS003G08+           ATAGTTCTTTAGCCATATTGTTGAAACAGTCTATCTGCTCAGAAGCATTAAAGCTACGAA
                      ____________________________________________________________
consensus             ATAGTTCTTTAGCCATATTGTTGAAACAGTCTATCTGCTCAGAAGCATTAAAGCTACGAA
 
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JMFS154D04+           ATGCATTTATGTTGGCTTGTTCTCCTTTTTCAGCCCCAGGCATTTCTGACTCTGTATTCA
JMFS111C02+           ATGCATTTATGTTGGCTTGTTCTCCTTTTTCAGCCCCAGGCATTTCTGACTCTGTATTCA
JMFS003G08+           ATGCATTTATGTTGGCTTGTTCTCCTTTTTCAGCCCCAGGCATTTCTGACTCTGTATTCA
                      ____________________________________________________________
consensus             ATGCATTTATGTTGGCTTGTTCTCCTTTTTCAGCCCCAGGCATTTCTGACTCTGTATTCA
 
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JMFS154D04+           TGATATAAACTTGATATACGTCTTTGGAGATCAAAGATGGATAATACTGGAGAAAGTTGC
JMFS111C02+           TGATATAAACTTGATATACGTCTTTGGAGATCAAAGATGGATAATACTGGAGAAAGTTGC
JMFS003G08+           TGATATAAACTTGATATACGTCTTTGGAGATCAAAGATGGATAATACTGGAGAAAGTTGC
                      ____________________________________________________________
consensus             TGATATAAACTTGATATACGTCTTTGGAGATCAAAGATGGATAATACTGGAGAAAGTTGC
 
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JMFS154D04+           AATCTTGGAGATCTAGAGAAACAATTCGAATCCGGCTTGTTGGTTTACAGTTCTGAGAGA
JMFS111C02+           AATCTTGGAGATCTAGAGAAACAATTCGAATCCGGCTTGTTGGTTTACAGTTCTGAGAGA
JMFS003G08+           AATCTTGGAGATCTAGAGAAACAATTCGAATCCGGCCTGTTGGTTTACAGTTCTGAGAGA
                      ____________________________________________________________
consensus             AATCTTGGAGATCTAGAGAAACAATTCGAATCCGGCTTGTTGGTTTACAGTTCTGAGAGA
 
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JMFS154D04+           TCGAAGCAGCGTTTAGAAGCTTTC                                    
JMFS111C02+           TCGAAGCAGCGTTTAGAAGCTTTCTCTCTTGTCTTTGAGCTTTTTGTTGTGGGAAGGTAC
JMFS003G08+           TCGAAGCAGCGTTTAGAAGCTTTCTCTCTTGTCTTTGAGCTTTTTGTTGTGGGAAGGTAC
                      ____________________________________________________________
consensus             TCGAAGCAGCGTTTAGAAGCTTTCTCTCTTGTCTTTGAGCTTTTTGTTGTGGGAAGGTAC
 
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JMFS111C02+           AGCTCAATTTGAATGCCTATATTTAGAAGCAAAGCGGTGATGATGA              
JMFS003G08+           AGCTCAATTTGAATGCCTATATTTAGAAGCAAAGCGGTGATGATGATACACACATTTTGG
                      ____________________________________________________________
consensus             AGCTCAATTTGAATGCCTATATTTAGAAGCAAAGCGGTGATGATGATACACACATTTTGG