Contig 008975:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN040O23Sequence444008975 (4)ref|XP_009598350.1|72.0PREDICTED: uncharacterized protein LOC104094178 [Nicotiana tomentosiformis]
JMFN045L05Sequence629008975 (4)ref|XP_009598350.1|156PREDICTED: uncharacterized protein LOC104094178 [Nicotiana tomentosiformis]
JMSF036E17Sequence677008975 (4)ref|XP_009598350.1|156PREDICTED: uncharacterized protein LOC104094178 [Nicotiana tomentosiformis]638008975 (4)ref|XP_009598350.1|156PREDICTED: uncharacterized protein LOC104094178 [Nicotiana tomentosiformis]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF036E17+                                        TTGAAACAATACTACACAACCAACATAACAG
                      ____________________________________________________________
consensus                                          TTGAAACAATACTACACAACCAACATAACAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF036E17-                            ACAGAAAGTACAATCTGAAGAGAAATCAAATCCAGCCTGGTT
JMSF036E17+           AAAGGAGTGTTCTGTTCAACAGAAAGTACAATCTGAAGAGAAATCAAATCCAGCCT-GTT
                      ____________________________________________________________
consensus             AAAGGAGTGTTCTGTTCAACAGAAAGTACAATCTGAAGAGAAATCAAATCCAGCCTGGTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF036E17-          AACTTCCAAACTTCACCAAATTCGGGCCATAAATTTCCATGGATTACGTTTATTTGATAC
JMSF036E17+           AACTTCCAAACTTCACCAAATTCGGGCCATAAATTTCCATGGATTACGTTTATTTGATAC
JMFN045L05+                                         AAATTTCCATGGATTACGTTTATNTGATAC
                      ____________________________________________________________
consensus             AACTTCCAAACTTCACCAAATTCGGGCCATAAATTTCCATGGATTACGTTTATTTGATAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF036E17-          TTACAAACTCGGGATGGACTTGGCTCTAATGAACTGTTTAAGAATGGCTTTTTCCTCGTC
JMSF036E17+           TTACAAACTCGGGATGGACTTGGCTCTAATGAACTGTTTAAGAATGGCTTTTTCCTCGTC
JMFN045L05+           TTACAAACTCGGGATGGACTTGGCTCTAATGAACTGTTTAAGAATGGCTTTTTCCTCGTC
                      ____________________________________________________________
consensus             TTACAAACTCGGGATGGACTTGGCTCTAATGAACTGTTTAAGAATGGCTTTTTCCTCGTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF036E17-          AATGCGTCTTTTCTCTTCAGGATCTTTTGGCTTCAGCTTTCTCTTCTCTTCCAGTATCCA
JMSF036E17+           AATGCGTCTTTTCTCTTCAGGATCTTTTGGCTTCAGCTTTCTCTTCTCTTCCAGTATCCA
JMFN040O23+                                           TCAGCTATCTCTTCTCTTCCAGTATCCA
JMFN045L05+           AATGCGTCTTTTCTCTTCAGGATCTTTTGGCTTCAGCTTTCTCTTCTCTTCCAGTATCCA
                      ____________________________________________________________
consensus             AATGCGTCTTTTCTCTTCAGGATCTTTTGGCTTCAGCTTTCTCTTCTCTTCCAGTATCCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF036E17-          CTTGAATATCTCACGCTTATCATTATCTGATATTGGTTCCATAACAGGCTGCACTACGGG
JMSF036E17+           CTTGAATATCTCACGCTTATCATTATCTGATATTGGTTCCATAACAGGCTGCACTACGGG
JMFN040O23+           CGAGAATATCTCCCGCTCATCATTCTCTGATATTGGTTCCACAACAGTCTGCGCTACGGG
JMFN045L05+           CTTGAATATCTCACGCTTATCATTATCTGATATTGGTTCCATAACAGGCTGCACTACGGG
                      ____________________________________________________________
consensus             CTTGAATATCTCACGCTTATCATTATCTGATATTGGTTCCATAACAGGCTGCACTACGGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF036E17-          TGGAGTGACAAGCTTCTCAGCAATTTTAGTAGATTCGGTAGCAGTCACCAGGGGAGCACT
JMSF036E17+           TGGAGTGACAAGCTTCTCAGCAATTTTAGTAGATTCGGTAGCAGTCACCAGGGGAGCACT
JMFN040O23+           TGGAGTGTCAAGCTCATCAGCCATTGTAGCAGATTCGGTATCAGTCACCAGGGGAGCAGT
JMFN045L05+           TGGAGTGACAAGCTTCTCAGCAATTTTAGTAGATTCGGTAGCAGTCACCAGGGGAGCACT
                      ____________________________________________________________
consensus             TGGAGTGACAAGCTTCTCAGCAATTTTAGTAGATTCGGTAGCAGTCACCAGGGGAGCACT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF036E17-          AGGAACTTCTTCCATTTCTATGACAGGGTCTTTGTTTTTTGTCCTCATGTAAAGGTAGGC
JMSF036E17+           AGGAACTTCTTCCATTTCTATGACAGGGTCTTTGTTTTTTGTCCTCATGTAAAGGTAGGC
JMFN040O23+           AGGAACTTCTTCCATCTTTATGACAGGGTCGTTGTTTATAGTCCTCATGTAAAGCTAGGC
JMFN045L05+           AGGAACTTCTTCCATTTCTATGACAGGGTCTTTGTTTTTTGTCCTCATGTAAAGGTAGGC
                      ____________________________________________________________
consensus             AGGAACTTCTTCCATTTCTATGACAGGGTCTTTGTTTTTTGTCCTCATGTAAAGGTAGGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF036E17-          TCCGATAGAGAGATTAACGGCCAAGAGCATAGGCAACATGAACCTGTAACGCCGAAGGAA
JMSF036E17+           TCCGATAGAGAGATTAACGGCCAAGAGCATAGGCAACATGAACCTGTAACGCCGAAGGAA
JMFN040O23+           TCCGATAGACAGATTCCCGTCCAAGAGCATAGGCAACACGATCCTGTACCGCCGAAGGAG
JMFN045L05+           TCCGATAGAGAGATTAACGGCCAAGAGCATAGGCAACATGAACCTGTAACGCCGAAGGAA
                      ____________________________________________________________
consensus             TCCGATAGAGAGATTAACGGCCAAGAGCATAGGCAACATGAACCTGTAACGCCGAAGGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF036E17-          CGGTTCCTTTGCCGGCGGAGAAGGTGGTGCGGGCTTAGTCGCCGCCGTTGAAGTTGAAGA
JMSF036E17+           CGGTTCCTTTGCCGGCGGAGAAGGTGGTGCGGGCTTAGTCGCCGCCGTTGAAGTTGAAGA
JMFN040O23+           CGGTTCCTTTGCCGGCGGAGAAGGTGGTGCGGGCTTCGTCGCCGCCGTTGAAGTTGAAGA
JMFN045L05+           CGGTTCCTTTGCCGGCGGAGAAGGTGGTGCGGGCTTAGTCGCCGCCGTTGAAGTTGAAGA
                      ____________________________________________________________
consensus             CGGTTCCTTTGCCGGCGGAGAAGGTGGTGCGGGCTTAGTCGCCGCCGTTGAAGTTGAAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF036E17-          CGCCATCGATGATGACGACGACGACGAAGGTGTTTGAGTAG-AAGATGCTTTTTGCTTCA
JMSF036E17+           CGCCATCGATGATGACGACGACGACGAAGGTGTTTGAGTAG-AAGATGCTTTTTGCTTCA
JMFN040O23+           CGCCATCGATGATGACGACGCCGTCGAAGGAGTTTGAGTAGTAAGATGCTTTTTGCTTCA
JMFN045L05+           CGCCATCGATGATGACGACGACGACGAAGGTGTTTGAGTAG-AAGATGCTTTTTGCTTCA
                      ____________________________________________________________
consensus             CGCCATCGATGATGACGACGACGACGAAGGTGTTTGAGTAG-AAGATGCTTTTTGCTTCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF036E17-          GCTGCGATTTCTTAGGCTTGTTCATGTAGAGCTTCGTCCCCTC                 
JMSF036E17+           GCTGCGATTTCTTAGGCTTGTTCATGTAGAGCTTCGTCCCCTC                 
JMFN040O23+           GATGCGATTTCCTAGCCTTGTTCATTTAGAGTTTCCTCCCCTC                 
JMFN045L05+           GCTGCGATTTCTTAGGCTTGTTCATGTAGAGCTTCGTCCCCTCACTCATCCTTCTTCCTT
                      ____________________________________________________________
consensus             GCTGCGATTTCTTAGGCTTGTTCATGTAGAGCTTCGTCCCCTCACTCATCCTTCTTCCTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN045L05+           CTCACACGCTTCTTATTTTGATACAGAATCGCCCTTCACTCTGCTCACAGGAGATCGTCA
                      ____________________________________________________________
consensus             CTCACACGCTTCTTATTTTGATACAGAATCGCCCTTCACTCTGCTCACAGGAGATCGTCA