Contig 008973:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFN044A12+                               AATAATTAATGGGCTGAAAGAGXXXXXXXXXXXXXXXXXX
                      ____________________________________________________________
consensus                                 AATAATTAATGGGCTGAAAGAGNNNNNNNNNNNNNNNNNN
 
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JMFF046L21+           TCCATACAGACAATAAATAA-TAAAATGATAGAAGATGCAAACTAAAGGATTTTGAATTC
JMFN044A12+           TCCATACAGACAATAAATAATTAAAATGATAGAAGATGCAAACTAAAGGATTTTGAATTC
                      ____________________________________________________________
consensus             TCCATACAGACAATAAATAATTAAAATGATAGAAGATGCAAACTAAAGGATTTTGAATTC
 
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JMFF046L21+           TTAAATTCTAAGTTTTCTGNAAAATTCTTCCAGCAATAATGGCAGCATCCATCACATCTG
JMFN044A12+           TTTAATTCTAAGGTTTCTTGAAAATTCTTCCAGCAATAATGGCAGCATCCATCACATCTG
                      ____________________________________________________________
consensus             TTTAATTCTAAGTTTTCTTGAAAATTCTTCCAGCAATAATGGCAGCATCCATCACATCTG
 
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JMFF046L21+           TTATTATATTCACAACCTCATCAACTTTGCAAGTGTTTCCTTTAAACGTCTTGGCCTTAG
JMFN044A12+           TTATTATATTCACAACCTCATCAACTTTGCAAGTGTTTCCTTTAAACGTCTTGGCCTTAG
                      ____________________________________________________________
consensus             TTATTATATTCACAACCTCATCAACTTTGCAAGTGTTTCCTTTAAACGTCTTGGCCTTAG
 
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JMFF046L21+           ATTTCTTGAATTTTGTCACACACGCCAAAAAGTTTTTGTTGCAGTGCTGGCTTAAATAGT
JMFN044A12+           ATTTCTTGAATTTTGTCACACACGCCAAAAAGTTTTTGTTGCAGTGCTGGCTTAAATAGT
                      ____________________________________________________________
consensus             ATTTCTTGAATTTTGTCACACACGCCAAAAAGTTTTTGTTGCAGTGCTGGCTTAAATAGT
 
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JMFF046L21+           CATTGCCATTGTTTTGAATGCAAACATCATGCTGCATACAGCAAGCATCAAGGCCGTCGC
JMFN044A12+           CATTGCCATTGTTTTGAATGCAAACATCATGCTGCATACAGCAAGCATCAAGGCCGTCGC
                      ____________________________________________________________
consensus             CATTGCCATTGTTTTGAATGCAAACATCATGCTGCATACAGCAAGCATCAAGGCCGTCGC
 
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JMFF046L21+           ACGGCTTTTCCCCTGGACATCCGGTGTACAGAATCCCACAGTATTTCCCATATCTTAGGA
JMFN044A12+           ACGGCTTTTCCCCTGGACATCCGGTGTACAGAATCCCACAGTATTTCCCATATCTTAGGA
                      ____________________________________________________________
consensus             ACGGCTTTTCCCCTGGACATCCGGTGTACAGAATCCCACAGTATTTCCCATATCTTAGGA
 
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JMFF046L21+           ATGGGGGCACTCCACAGAACTTGGACTCACACCTTCTACTACATTCTTTGGCCAGGGAAA
JMFN044A12+           ATGGGGGCACTCCACAGAACTTGGACTCACACGTTCTACTACATTCTTTGGCCAGGGAAA
                      ____________________________________________________________
consensus             ATGGGGGCACTCCACAGAACTTGGACTCACACGTTCTACTACATTCTTTGGCCAGGGAAA
 
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JMFF046L21+           GGCCGGCGCCGGCGTCAACGCCGACGTTAAGGGCACGAGTTGGAATTACATAGGAGTTGA
JMFN044A12+           GGCCGGCGCCGGCGTCAACGCCGACGTTAAGGGCACGAGTTGGAATTACATAGGAGTTGA
                      ____________________________________________________________
consensus             GGCCGGCGCCGGCGTCAACGCCGACGTTAAGGGCACGAGTTGGAATTACATAGGAGTTGA
 
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JMFF046L21+           GGGATATGAATGCAAATAAGAAAAGCAGAGCAAACTTGAATGGCAGAAGAGCAGCCATTA
JMFN044A12+           GGGATATGAATGCAAATAAGAAAAGCAGAGCAAACTTGAATGGCAGAAGAGCAGCCATTA
                      ____________________________________________________________
consensus             GGGATATGAATGCAAATAAGAAAAGCAGAGCAAACTTGAATGGCAGAAGAGCAGCCATTA
 
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JMFF046L21+           AAGGATCGCAGA                                                
JMFN044A12+           AAGGATCGCAGATTAGGAAGAATGAGAAAGCTAGCGAGCTCAGATTTATTGGGAATTGAA
                      ____________________________________________________________
consensus             AAGGATCGCAGATTAGGAAGAATGAGAAAGCTAGCGAGCTCAGATTTATTGGGAATTGAA