Contig 008971:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN008J07Sequence627008971 (6)dbj|BAF46310.1|1e-128SEC14 cytosolic factor / phosphoglyceride transfer family protein [Ipomoea nil]
JMFN030L10Sequence652008971 (6)dbj|BAF46310.1|3e-140SEC14 cytosolic factor / phosphoglyceride transfer family protein [Ipomoea nil]
JMFN041H09Sequence637008971 (6)dbj|BAF46310.1|3e-131SEC14 cytosolic factor / phosphoglyceride transfer family protein [Ipomoea nil]
JMFN042H04Sequence358008971 (6)dbj|BAF46310.1|3e-58SEC14 cytosolic factor / phosphoglyceride transfer family protein [Ipomoea nil]
JMFS163A10Sequence615008971 (6)dbj|BAF46310.1|1e-72SEC14 cytosolic factor / phosphoglyceride transfer family protein [Ipomoea nil]
JMSF001F11Sequence369010991 (4)dbj|BAF46310.1|2e-54SEC14 cytosolic factor / phosphoglyceride transfer family protein [Ipomoea nil]715008971 (6)dbj|BAF46310.1|4e-147SEC14 cytosolic factor / phosphoglyceride transfer family protein [Ipomoea nil]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF001F11-                                                         GTAGAATTTATTA
                      ____________________________________________________________
consensus                                                            GTAGAATTTATTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF001F11-          CATTGAGAATATTTCTTAATTCTCGAGATACAGATAGTTGTGTGACCAAGTATTCATACA
                      ____________________________________________________________
consensus             CATTGAGAATATTTCTTAATTCTCGAGATACAGATAGTTGTGTGACCAAGTATTCATACA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF001F11-          AAGGGTATTTTGAGCTAGCCTTCCACAGCCAAAGGGTTGATTACAACATCCTGCATAGCT
                      ____________________________________________________________
consensus             AAGGGTATTTTGAGCTAGCCTTCCACAGCCAAAGGGTTGATTACAACATCCTGCATAGCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF001F11-          ACAAACTTTGACTTCCCACCATACTCTTCTGGCAACACATCTTCTCCTACTTCTCTCATC
                      ____________________________________________________________
consensus             ACAAACTTTGACTTCCCACCATACTCTTCTGGCAACACATCTTCTCCTACTTCTCTCATC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF001F11-          AACTGCAACCTTTCCTCTTCATTGCTAACAATCACAATCTTTTCAAGAGTTGCTTTCTCA
                      ____________________________________________________________
consensus             AACTGCAACCTTTCCTCTTCATTGCTAACAATCACAATCTTTTCAAGAGTTGCTTTCTCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF001F11-          AGGAAACGGGAAACCAACTTCCAGACAGCAACGAAGAATAGTGGCATGTGTAATAGGTAA
JMFN008J07+                                        AACGAAGAATAGTGGCATGTGTAATAGGTAA
                      ____________________________________________________________
consensus             AGGAAACGGGAAACCAACTTCCAGACAGCAACGAAGAATAGTGGCATGTGTAATAGGTAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF001F11-          AACTTGGCTAAGCGTTCAGGGTAGTAAGCCTGTAAGAACTGAAAACCGGTGATTAGTGCA
JMFN008J07+           AACTTGGCTAAGCGTTCAGGGTAGTAAGCCTGTAAGAACTGAAAACCGGTGATTAGTGCA
                      ____________________________________________________________
consensus             AACTTGGCTAAGCGTTCAGGGTAGTAAGCCTGTAAGAACTGAAAACCGGTGATTAGTGCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF001F11-          CGGGCATCAACGTTTTTATAGCTAATATGCTGCAAATCAAGAATACCAATCAACTTTTCG
JMFN041H09+                                                         CAATCAACTTTTCG
JMFN030L10+                                                         CAATCAACTTTTCG
JMFN008J07+           CGGGCATCAACGTTTTTATAGCTAATATGCTGCAAATCAAGAATACCAATCAACTTTTCG
                      ____________________________________________________________
consensus             CGGGCATCAACGTTTTTATAGCTAATATGCTGCAAATCAAGAATACCAATCAACTTTTCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF001F11-          CTTCCTATTTCTCCATCCTTCGAAGAACTTGCAAGTGTTTTGTCTAGAAGGTGAACCACA
JMFN041H09+           CTTCCTATTTCTCCATCCTTCGAAGAACTTGCAAGTGTTTTGTCTAGAAGGTGAACCACA
JMFN030L10+           CTTCCTATTTCTCCATCCTTCGAAGAACTTGCAAGTGTTTTGTCTAGAAGGTGAACCACA
JMFN008J07+           CTTCCTATTTCTCCATCCTTCGAAGAACTTGCAAGTGTTTTGTCTAGAAGGTGAACCACA
                      ____________________________________________________________
consensus             CTTCCTATTTCTCCATCCTTCGAAGAACTTGCAAGTGTTTTGTCTAGAAGGTGAACCACA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF001F11-          AATTTCTTAAATTGGAGTTGATCCTTGGCAGGAAAATGATTGCGACCTTTCACGATCATA
JMFN041H09+           AATTTCTTAAATTGGAGTTGATCCTTGGCAGGAAAATGATTGCGACCTTTCACGATCATA
JMFN030L10+           AATTTCTTAAATTGGAGTTGATCCTTGGCAGGAAAATGATTGCGACCTTTCACGATCATA
JMFS163A10+               TCTTAAATTGGAGTTGATCCTTGGCAGGAAAATGATTGCGACCTTTCACGATCATA
JMFN008J07+           AATTTCTTAAATTGGAGTTGATCCTTGGCAGGAAAATGATTGCGACCTTTCACGATCATA
                      ____________________________________________________________
consensus             AATTTCTTAAATTGGAGTTGATCCTTGGCAGGAAAATGATTGCGACCTTTCACGATCATA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF001F11-          ACTGGGAACCCATTTTTGGATAATCCTTGTAAGCAAATCTTCCTAGATTCCAGTTCATCT
JMFN041H09+           ACTGGGAACCCATTTTTGGATAATCCTTGTAAGCAAATCTTCCTAGATTCCAGTTCATCT
JMFN030L10+           ACTGGGAACCCATTTTTGGATAATCCTTGTAAGCAAATCTTCCTAGATTCCAGTTCATCT
JMFS163A10+           ACTGGGAACCCATTTTTGGATAATCCTTGTAAGCAAATCTTCCTAGATTCCAGTTCATCT
JMFN008J07+           ACTGGGAACCCATTTTTGGATAATCCTTGTAAGCAAATCTTCCTAGATTCCAGTTCATCT
JMFN042H04+             TGGGAACCCATTTTTGGATAATCCTTGTAAGCAAATCTTCCTAGATTCCAGTTCATCT
                      ____________________________________________________________
consensus             ACTGGGAACCCATTTTTGGATAATCCTTGTAAGCAAATCTTCCTAGATTCCAGTTCATCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF001F11-          GGCACTTCAGAGTCAGGANTATATCCGAGCGGAACAAAAGCAGCTCTCCATTGCCGCCAT
JMFN041H09+           GGCACTTCAGAGTCAGGAATATATCCGAGCGGAACAAAAGCAGCTCTCCATTGCCGCCAT
JMFN030L10+           GGCACTTCAGAGTCAGGAATATATCCGAGCGGAACAAAAGCAGCTCTCCATTGCCGCCAT
JMFS163A10+           GGCACTTCAGAGTCAGGAATATATCCGAGCGGAACAAAAGCAGCTCTCCATTGCCGCCAT
JMFN008J07+           GGCACTTCAGAGTCAGGAATATATCCGAGCGGAACAAAAGCAGCTCTCCATTGCCGCCAT
JMFN042H04+           GGCACTTCAGAGTCAGGAATATATCCGAGCGGAACAAAAGCAGCTCTCCATTGCCGCCAT
                      ____________________________________________________________
consensus             GGCACTTCAGAGTCAGGAATATATCCGAGCGGAACAAAAGCAGCTCTCCATTGCCGCCAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF001F11-          TGCACAAACATCTTGGCTGCCTTTTCTGGGTCCATTGCTCTT                  
JMFN041H09+           TGCACAAACATCTTGGCTGCCTTTTCTGGGTCCATTGCTCTTGCAATCAAGAACCTCATA
JMFN030L10+           TGCACAAACATCTTGGCTGCCTTTTCTGGGTCCATTGCTCTTGCAATCAAGAACCTCATA
JMFS163A10+           TGCACAAACATCTTGGCTGCCTTTTCTGGGTCCATTGCTCTTGCAATCAAGAACCTCATA
JMFN008J07+           TGCACAAACATCTTGGCTGCCTTTTCTGGGTCCATTGCTCTTGCAATCAAGAACCTCATA
JMFN042H04+           TGCACAAACATCTTGGCTGCCTTTTCTGGGTCCATTGCTCTTGCAATCAAGAACCTCATA
                      ____________________________________________________________
consensus             TGCACAAACATCTTGGCTGCCTTTTCTGGGTCCATTGCTCTTGCAATCAAGAACCTCATA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN041H09+           AGAGTTGGGTCACCGTAGCTCTCTGTAGAAGAACCAAGCTTCTCAACTGACTTCCTTATC
JMFN030L10+           AGAGTTGGGTCACCGTAGCTCTCTGTAGAAGAACCAAGCTTCTCAACTGACTTCCTTATC
JMFS163A10+           AGAGTTGGGTCACCGTAGCTCTCTGTAGAAGAACCAAGCTTCTCAACTGACTTCCTTATC
JMFN008J07+           AGAGTTGGGTCACCGTAGCTCTCTGTAGAAGAACCAAGCTTCTCAACTGACTTCCTTATC
JMFN042H04+           AGAGTTGGGTCACCGTAGCTCTCTGTAGAAGAACCAAGCTTCTCAACTGACTTCCTTATC
                      ____________________________________________________________
consensus             AGAGTTGGGTCACCGTAGCTCTCTGTAGAAGAACCAAGCTTCTCAACTGACTTCCTTATC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN041H09+           TGGGTCAGTGCAAGCTCTTCTTGTGCTCTTTCCATTTTTCCAAATCTGAAAATGGTGATT
JMFN030L10+           TGGGTCAGTGCAAGCTCTTCTTGTGCTCTTTCCATTTTTCCAAATCTGAAAATGGTGATT
JMFS163A10+           TGGGTCAGTGCAAGCTCTTCTTGTGCTCTTTCCATTTTTCCAAATCTGAAAATGGTGATT
JMFN008J07+           TGGGTCAGTGCAAGCTCTTCTTGTGCTCTTTCCATTTTTCCAAATCTGAAAATGGTGATT
JMFN042H04+           TGGGTCAGTGCAAGCTCTTCTTGTGCTCTTTCCATTTTTCCAAATCTGAAAATGGTGATT
                      ____________________________________________________________
consensus             TGGGTCAGTGCAAGCTCTTCTTGTGCTCTTTCCATTTTTCCAAATCTGAAAATGGTGATT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN041H09+           CCTTTGGGCTGAAAGAAGAAAGATGGAATTTTTTAATAAGAAAGGGGGGAAGGAAA    
JMFN030L10+           CCTTTGGGCTGAAAGAAGAAAGATGGAATTTT                            
JMFS163A10+           CCTTTGGGCTGAAAGAAGAAAGATGGAATTTTTTAATAAGAAA                 
JMFN008J07+           CCTTTGGGCTGAAAGAAGAAAGATGGAATTTTTTAATAAGAAAGGGGGGAAGGAAA    
JMFN042H04+           CCTTTGGGCTGAAAGAAGAAAGATGGAATTTTTTAATAAGAAAGGGGGGAAGGAAAGAGA
                      ____________________________________________________________
consensus             CCTTTGGGCTGAAAGAAGAAAGATGGAATTTTTTAATAAGAAAGGGGGGAAGGAAAGAGA