Contig 008970:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN034O15Sequence517008970 (3)
JMFN042C02Sequence525008970 (3)
JMFS069F11Sequence349008970 (3)

Alignment

This contig is upended


. : . : . : . : . : . :
JMFN034O15+ GATAACTTCAATAATTATAATGGTAAATATTTAATACGGA
JMFN042C02+ GGGTGGATAACTTCAATAATTATAATGGTAAATATTTAATACGGA
                      ____________________________________________________________
consensus GGGTGGATAACTTCAATAATTATAATGGTAAATATTTAATACGGA
 
. : . : . : . : . : . :
JMFN034O15+ GTACAAAATACCGAGTAATATATTGTAATCCGGAGTAACC--AAAAAAAAAAAAAAGTAT
JMFN042C02+ GTACAAAATACCGAGTAATATATTGTAATACGGAGTAAACAAAAAAAAAAAAAAAAGTAT
                      ____________________________________________________________
consensus GTACAAAATACCGAGTAATATATTGTAATCCGGAGTAACCAAAAAAAAAAAAAAAAGTAT
 
. : . : . : . : . : . :
JMFN034O15+ ATAATCGTATCCATCAATAATAAAATATATAAATGGCAAAAAAAAAAGAAAAAATTAACA
JMFS069F11+ AAAATTAACA
JMFN042C02+ ATAATCGTATCCATCAATAATAAAATATATAAATGGCAAAAAAAAAAGAAAAAATTAACA
                      ____________________________________________________________
consensus ATAATCGTATCCATCAATAATAAAATATATAAATGGCAAAAAAAAAAGAAAAAATTAACA
 
. : . : . : . : . : . :
JMFN034O15+ ACCCTGCTATTCATCAAGAATCATTGCAATGCACAGTCACTCGCACGTCTCTGTATACAA
JMFS069F11+ ACCCTGCTATTCATCAAGAATCATTGCAATGCACAGTCACTCGCACGTCTCTGTATACAA
JMFN042C02+ ACCCTGCTATTCATCAAGAATCATTGCAATGCACAGTCACTCGCACGTCTCTGTATACAA
                      ____________________________________________________________
consensus ACCCTGCTATTCATCAAGAATCATTGCAATGCACAGTCACTCGCACGTCTCTGTATACAA
 
. : . : . : . : . : . :
JMFN034O15+ CAAAATAGAATAGAATAAATGATGGGAACAGATGAGAACTCGGATATGCCATCTCTAGTG
JMFS069F11+ CAAAATAGAATAGAATAAATGATGGGAACAGATGAGAACTCGGATATGCCATCTCTAGTG
JMFN042C02+ CAAAATAGAATAGAATAAATGATGGGAACAGATGAGAACTCGGATATGCCATCTCTAGTG
                      ____________________________________________________________
consensus CAAAATAGAATAGAATAAATGATGGGAACAGATGAGAACTCGGATATGCCATCTCTAGTG
 
. : . : . : . : . : . :
JMFN034O15+ CTTGATAAGAGTTGCGAGAGAGAGGAGCATTGAGGAAACCAGAACCACTCCGGTCACCGG
JMFS069F11+ CTTGATAAGAGTTGCGAGAGAGAGGAGCATTGAGGAAACCAGAACCACTCCGGTCACCGG
JMFN042C02+ CTTGATAAGAGTTGCGAGAGAGAGGAGCATTGAGGAAACCAGAACCACTCCGGTCACCGG
                      ____________________________________________________________
consensus CTTGATAAGAGTTGCGAGAGAGAGGAGCATTGAGGAAACCAGAACCACTCCGGTCACCGG
 
. : . : . : . : . : . :
JMFN034O15+ CAAAGAGGATGCTCCGCCTTTGTCAGGCGACGGGGCCGGAGCCGCCGACTGAGCTGAAAC
JMFS069F11+ CAAAGAGGATGCTCCGCCTTTGTCAGGCGACGGGGCCGGAGCCGCCGACTGAGCTGAAAC
JMFN042C02+ CAAAGAGGATGCTCCGCCTTTGTCAGGCGACGGGGCCGGAGCCGCCGACTGAGCTGAAAC
                      ____________________________________________________________
consensus CAAAGAGGATGCTCCGCCTTTGTCAGGCGACGGGGCCGGAGCCGCCGACTGAGCTGAAAC
 
. : . : . : . : . : . :
JMFN034O15+ GGCAGAAACCGCCACCATGACGGCAACGAAAACTGCCAAAACCTTCAAGAAATTCACCGC
JMFS069F11+ GGCAGAAACCGCCACCATGACGGCAACGAAAACTGCCAAAACCTTCAAGAAATTCACCGC
JMFN042C02+ GGCAGAAACCGCCACCATGACGGCAACGAAAACTGCCAAAACCTTCAAGAAATTCACCGC
                      ____________________________________________________________
consensus GGCAGAAACCGCCACCATGACGGCAACGAAAACTGCCAAAACCTTCAAGAAATTCACCGC
 
. : . : . : . : . : . :
JMFN034O15+ AGCCATTGCAGACAATTCACTGATCGGAGTAGTTTTGAATATATATGCAATGACTTTGA
JMFS069F11+ AGCCATTGCAGACAATTCACTGATCGGAGTAGTTTTGAA
JMFN042C02+ AGCCATTGCAGACAATTCACTGATCGGAGTAGTTTTGAATATATATGCAATGACTTTGAT
                      ____________________________________________________________
consensus AGCCATTGCAGACAATTCACTGATCGGAGTAGTTTTGAATATATATGCAATGACTTTGAT