Contig 008968:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF022B21Sequence520008035 (9)gb|EPS68222.1|6e-42hypothetical protein M569_06548, partial [Genlisea aurea]793008968 (5)
JMFN040F06Sequence638008968 (5)
JMFS032D03Sequence589008968 (5)
JMSF002K18Sequence400008035 (9)gb|EPS68222.1|1e-15hypothetical protein M569_06548, partial [Genlisea aurea]732008968 (5)
JMSF044B01Sequence742008035 (9)emb|CBI22388.3|1e-97unnamed protein product [Vitis vinifera]813008968 (5)

Alignment

This contig is upended


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rJMSF002K18+                                                       GCTGAGGGTGATGCT
rJMSF044B01+                                                                  TGCT
                      ____________________________________________________________
consensus                                                          GCTGAGGGTGATGCT
 
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rJMSF002K18+          GCAGACAATAAAATGATTGTTGCACCGAGTAATGAAGATCCTGAACCTGTTGCCTCCGT-
rJMSF044B01+          GCAGACAATAAANTGATTGTTGCACCGAGTAATGAAGATCCTGAACCTGTTGCCTCCGTA
                      ____________________________________________________________
consensus             GCAGACAATAAAATGATTGTTGCACCGAGTAATGAAGATCCTGAACCTGTTGCCTCCGTA
 
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rJMSF002K18+          AAATGAACATGAAAGTTCCACGGCAGTTGA-CCCAGCTCAAGAAAGTCCTAACAAGCAGA
rJMSF044B01+          AAATGAACATGAAAGTTCCACGGCAGNTGACCCCAGCTCAAGAAAGTCCTAACAAGCAGA
rJMFF022B21+                                                   GAAAGTCCTAACAAGCAGA
                      ____________________________________________________________
consensus             AAATGAACATGAAAGTTCCACGGCAGTTGACCCCAGCTCAAGAAAGTCCTAACAAGCAGA
 
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rJMSF002K18+          CAGAAGATGTAAG-TTCCATGGCAGTTGACCCAGCTCAAGAAAGTCCTAACAAGCAGACA
rJMSF044B01+          CAGAAGATGTAAGTTTCCATGGCAGTTGACCCAGCTCAAGAAAGTCCTAACAAGCAGACA
rJMFF022B21+          CAGAAGATGTAAG-TTCCATGGCAGTTGACCCAGCTCAAGAAAGTCCTAACAAGCAGACA
                      ____________________________________________________________
consensus             CAGAAGATGTAAG-TTCCATGGCAGTTGACCCAGCTCAAGAAAGTCCTAACAAGCAGACA
 
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rJMSF002K18+          GAAGTTGAAAGTTCCATGGCAGATGACACAGCTCAAGAGAATCCTAACGAGCAGACAGAT
rJMSF044B01+          GAAGTTGAAAGTTCCATGGCAGATGACACAGCTCAAGAGAATCCTAACGAGCAGACAGAT
rJMFF022B21+          GAAGTTGAAAGTTCCATGGCAGATGACACAGCTCAAGAGAATCCTAACGAGCAGACAGAT
                      ____________________________________________________________
consensus             GAAGTTGAAAGTTCCATGGCAGATGACACAGCTCAAGAGAATCCTAACGAGCAGACAGAT
 
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rJMSF002K18+          AATGCTCAGGAACAGCCAAGTGGAAGCCCAAAAGCTGGAATGGATATCGACGAGGTAGGG
rJMSF044B01+          AATGCTCAGGAACAGCCAAGTGGAAGCCCAAAAGCTGGAATGGATATCGACGAGGTAGGG
rJMFF022B21+          AATGCTCAGGAACAGCCAAGTGGAAGCCCAAAAGCTGGAATGGATATCGACGAGGTAGGG
JMFN040F06-                                GGAAGCCCAAAAGCTGGAATGGATATCGACGAGGTAGGG
                      ____________________________________________________________
consensus             AATGCTCAGGAACAGCCAAGTGGAAGCCCAAAAGCTGGAATGGATATCGACGAGGTAGGG
 
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rJMSF002K18+          AATACTACAGACACAAATGATTTATCTCACACAACACCTGCTGCCAGGGAGTCTTGTTTG
rJMSF044B01+          AATACTACAGACACAAATGATTTATCTCACACAACACCTGCTGCCAGGGAGTCTTGTTTG
rJMFF022B21+          AATACTACAGACACAAATGATTTATCTCACACAACACCTGCTGCCAGGGAGTCTTGTTTG
JMFS032D03-              ACTACAGACACAAATGATTTATCTCACACAACACCTGCTGCCAGGGAGTCTTGTTTG
JMFN040F06-           AATACTACAGACACAAATGATTTATCTCACACAACACCTGCTGCCAGGGAGTCTTGTTTG
                      ____________________________________________________________
consensus             AATACTACAGACACAAATGATTTATCTCACACAACACCTGCTGCCAGGGAGTCTTGTTTG
 
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rJMSF002K18+          ACTGATGAGGTGCATGCCGAAAATGCATGCAACGAATCCGAAAGTGGCATTGTTTCTTCT
rJMSF044B01+          ACTGATGAGGTGCATGCCGAAAATGCATGCAACGAATCCGAAAGTGGCATTGTTTCTTCT
rJMFF022B21+          ACTGATGAGGTGCATGCCGAAAATGCATGCAACGAATCCGAAAGTGGCATTGTTTCTTCT
JMFS032D03-           ACTGATGAGGTGCATGCCGAAAATGCATGCAACGAATCCGAAAGTGGCATTGTTTCTTCT
JMFN040F06-           ACTGATGAGGTGCATGCCGAAAATGCATGCAACGAATCCGAAAGTGGCATTGTTTCTTCT
                      ____________________________________________________________
consensus             ACTGATGAGGTGCATGCCGAAAATGCATGCAACGAATCCGAAAGTGGCATTGTTTCTTCT
 
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rJMSF002K18+          GGTAGTCCCCAGTTAATGAATGCAGATGACAATCCAACAAGTGGCAATGACGGTTCAGCT
rJMSF044B01+          GGTAGTCCCCAGTTAATGAATGCAGATGACAATCCAACAAGTGGCAATGACAGTTCAGCT
rJMFF022B21+          GGTAGTCCCCAGTTAATGAATGCAGATGACAATCCAACAAGTGGCAATGACGGTTCAGCT
JMFS032D03-           GGTAGTCCCCAGTTAATGAATGCAGATGACAATCCAACAAGTGGCAATGACGGTTCAGCT
JMFN040F06-           GGTAGTCCCCAGTTAATGAATGCAGATGACAATCCAACAAGTGGCAATGACGGTTCAGCT
                      ____________________________________________________________
consensus             GGTAGTCCCCAGTTAATGAATGCAGATGACAATCCAACAAGTGGCAATGACGGTTCAGCT
 
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rJMSF002K18+          TCGGCTTCGGCCGAAGCTTCTGTGTCTCCCATTGCAGAGGACCAGGTCTCTTGAACTTGC
rJMSF044B01+          TCGGCTTCGGCCGAAGCTTCTGTGTCTCCCATTGCAGAGGACCAGGTCTCTTGAACTTGC
rJMFF022B21+          TCGGCTTCGGCCGAAGCTTCTGTGTCTCCCATTGCAGAGGACCAGGTCTCTTGAACTTGC
JMFS032D03-           TCGGCTTCGGCCGAAGCTTCTGTGTCTCCCATTGCAGAGGACCAGGTCTCTTGAACTTGC
JMFN040F06-           TCGGCTTCGGCCGAAGCTTCTGTGTCTCCCATTGCAGAGGACCAGGTCTCTTGAACTTGC
                      ____________________________________________________________
consensus             TCGGCTTCGGCCGAAGCTTCTGTGTCTCCCATTGCAGAGGACCAGGTCTCTTGAACTTGC
 
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rJMSF002K18+          TAATATATGACAAAAAGATGCATTGCTGGATGTTGGCACGGGACTCCAATAAACTTTCCT
rJMSF044B01+          TAATATATGACAAAAAGATGCATTGCTGGATGTTGGCACGGGACTCCAATAAACTTTCCT
rJMFF022B21+          TAATATATGACAAAAAGATGCATTGCTGGATGTTGGCACGGGACTCCAATAAACTTTCCT
JMFS032D03-           TAATATATGACAAAAAGATGCATTGCTGGATGTTGGCACGGGACTCCAATAAACTTTCCT
JMFN040F06-           TAATATATGACAAAAAGATGCATTGCTGGATGTTGGCACGGGACTCCAATAAACTTTCCT
                      ____________________________________________________________
consensus             TAATATATGACAAAAAGATGCATTGCTGGATGTTGGCACGGGACTCCAATAAACTTTCCT
 
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rJMSF002K18+          AAGACTTGTACTCATCTTGTTCAAATCATGAGGTTTTGAGATCTTGTTACACATTTTGAG
rJMSF044B01+          AAGACTTGTACTCATCTTGTTCAAATCATGAGGTTTTGAGATCTTGTTACACATTTTGAG
rJMFF022B21+          AAGACTTGTACTCATCTTGTTCAAATCATGAGGTTTTGAGATCTTGTTACACATTTTGAG
JMFS032D03-           AAGACTTGTACTCATCTTGTTCAAATCATGAGGTTTTGAGATCTTGTTACACATTTTGAG
JMFN040F06-           AAGACTTGTACTCATCTTGTTCAAATCATGAGGTTTTGAGATCTTGTTACACATTTTGAG
                      ____________________________________________________________
consensus             AAGACTTGTACTCATCTTGTTCAAATCATGAGGTTTTGAGATCTTGTTACACATTTTGAG
 
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rJMSF002K18+          ATTTTGGACACAAAAAAACAAACATATTTTTCAGACTGTATCAT                
rJMSF044B01+          ATTTTGGACACAAAAAAACAAACATATTTTTCAGACTGTATCATTGAAATTCATGTTGGA
rJMFF022B21+          ATTTTGGACACAAAAAAACAAACATATTTTTCAGACTGTATCATTGAAATTCATGTTGGA
JMFS032D03-           ATTTTGGACACAAAAAAACAAACATATTTTTCAGACTGTATCATTGAAATTCATGTTGGA
JMFN040F06-           ATTTTGGACACAAAAAAACAAACATATTTTTCAGACTGTATCATTGAAATTCATGTTGGA
                      ____________________________________________________________
consensus             ATTTTGGACACAAAAAAACAAACATATTTTTCAGACTGTATCATTGAAATTCATGTTGGA
 
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rJMSF044B01+          GCTGTGATCCCCTCTCTTCCCATTGGGGAATTAGTTGCAAATTGTTTGGCAGGGTGGTAG
rJMFF022B21+          GCTGTGATCCCCTCTCTTCCCATTGGGGAATTAGTTGCAAATTGTTTGGCAGGGTGGTAG
JMFS032D03-           GCTGTGATCCCCTCTCTTCCCATTGGGGAATTAGTTGCAAATTGTTTGGCAGGGTGGTAG
JMFN040F06-           GCTGTGATCCCCTCTCTTCCCATTGGGGAATTAGTTGCAAATTGTTTGGCAGGGTGGTAG
                      ____________________________________________________________
consensus             GCTGTGATCCCCTCTCTTCCCATTGGGGAATTAGTTGCAAATTGTTTGGCAGGGTGGTAG
 
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rJMSF044B01+          GGGGAATGGTCTGAAG                                            
rJMFF022B21+          GGGGAATGGTCTGAAGTTTGTTGATGTCAACCCGTATACTGTTTTGGTAAATAGGCCTTG
JMFS032D03-           GGGGAATGGTCTGAAGTTTGTTGATGTCAACCCGTATACTGTTTTGGTAAATAGGCCTTG
JMFN040F06-           GGGGAATGGTCTGAAGTTTGTTGATGTCAACCCGTATACTGTTTTGGT-AATAGGCCTTG
                      ____________________________________________________________
consensus             GGGGAATGGTCTGAAGTTTGTTGATGTCAACCCGTATACTGTTTTGGTAAATAGGCCTTG
 
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rJMFF022B21+          TTTACATGGTCAGGCAT                                           
JMFS032D03-           TTTACATGGTCAGGCATTGAATCCATTGTATTTCCTAACATT                  
JMFN040F06-           TTTACATGGTCAGGCATTGAATCCATTGTATTTCCTAACATTNCATTTCAAATTTTTGCT
                      ____________________________________________________________
consensus             TTTACATGGTCAGGCATTGAATCCATTGTATTTCCTAACATTNCATTTCAAATTTTTGCT