| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF003I04 | Sequence | 575 | 005920 (4) | ref|XP_006367480.1| | 8e-77 | PREDICTED: ADP,ATP carrier protein 3, mitochondrial-like [Solanum tuberosum] | 744 | 008966 (5) | ref|XP_007043627.1| | 1e-87 | ADP/ATP carrier 3 isoform 1 [Theobroma cacao] ref|XP_007043628.1| ADP/ATP carrie |
| JMFF011N14 | Sequence | 534 | 005920 (4) | ref|XP_006367480.1| | 3e-59 | PREDICTED: ADP,ATP carrier protein 3, mitochondrial-like [Solanum tuberosum] | 737 | 008966 (5) | ref|XP_007043627.1| | 4e-91 | ADP/ATP carrier 3 isoform 1 [Theobroma cacao] ref|XP_007043628.1| ADP/ATP carrie |
| JMFF036M16 | Sequence | 553 | 005920 (4) | ref|XP_006367480.1| | 2e-71 | PREDICTED: ADP,ATP carrier protein 3, mitochondrial-like [Solanum tuberosum] | 743 | 008966 (5) | ref|XP_010689049.1| | 1e-88 | PREDICTED: ADP,ATP carrier protein [Beta vulgaris subsp. vulgaris] ref|XP_010689 |
| JMFF045H24 | Sequence | 646 | 005920 (4) | ref|XP_006367480.1| | 1e-89 | PREDICTED: ADP,ATP carrier protein 3, mitochondrial-like [Solanum tuberosum] | 567 | 008966 (5) | ref|XP_010497666.1| | 5e-37 | PREDICTED: ADP,ATP carrier protein 3, mitochondrial-like, partial [Camelina sat |
| JMFN039A23 | Sequence | 495 | 008966 (5) | ||||||||
This contig is upended
. : . : . : . : . : . :
rJMFF011N14+ ATTATGCCAGAACACGCCT
____________________________________________________________
consensus ATTATGCCAGAACACGCCT
. : . : . : . : . : . :
rJMFF011N14+ GGNTAATGATGGCAAGGCTGCAAAAAAGGGCGGTGAGAGGCAGTTTAACGGTTTGCTCGG
rJMFF003I04+ TAATGATGGCAAGGCTGCAAAAAAGGGCGGTGAGAGGCAGTTTAACGGTTTGCTCGA
rJMFF036M16+ TAATGATGGCAAGGCTGCAAAAAAGGGCGGTGAGAGGCAGTTTAACGGTTTGCTCGA
____________________________________________________________
consensus GGNTAATGATGGCAAGGCTGCAAAAAAGGGCGGTGAGAGGCAGTTTAACGGTTTGCTCGA
. : . : . : . : . : . :
rJMFF011N14+ TGTTTACAAGAAAACGATCCAGTCTGATGGTCTTGCTGGGCTCTATCGTGGATTTACCAT
rJMFF003I04+ TGTTTACAAGAAAACGATCCAGTCTGATGGTCTTGCTGGGCTCTATCGTGGATTTACCAT
rJMFF036M16+ TGTTTACAAGAAAACGATCCAGTCTGATGGTCTTGCTGGGCTCTATCGTGGATTTACCAT
____________________________________________________________
consensus TGTTTACAAGAAAACGATCCAGTCTGATGGTCTTGCTGGGCTCTATCGTGGATTTACCAT
. : . : . : . : . : . :
rJMFF011N14+ CTCGTGTGTTGGGATTATTGTTTATCGTGGGCTGTACTTTGGGATGTACGACTCACTTAA
rJMFF003I04+ CTCGTGTGTTGGGATTATTGTTTATCGTGGGCTGTACTTTGGGATGTACGACTCACTTAA
rJMFF036M16+ CTCGTGTGTTGGGATTATTGTTTATCGTGGGCTGTACTTTGGGATGTACGACTCACTTAA
____________________________________________________________
consensus CTCGTGTGTTGGGATTATTGTTTATCGTGGGCTGTACTTTGGGATGTACGACTCACTTAA
. : . : . : . : . : . :
rJMFF011N14+ ACCTGTTGTTCTAGTTGGTGGCTTACAGGACAGTTTCTTGGCAAGTTTCTTACTGGGATG
rJMFF003I04+ ACCTGTTGTTCTAGTTGGTGGCTTACAGGACAGTTTCTTGGCAAGTTTCTTACTGGGATG
rJMFF036M16+ ACCTGTTGTTCTAGTTGGTGGCTTACAGGACAGTTTCTTGGCAAGTTTCTTACTGGGATG
rJMFF045H24+ TGGCAAGTTTCTTACTGGGATG
____________________________________________________________
consensus ACCTGTTGTTCTAGTTGGTGGCTTACAGGACAGTTTCTTGGCAAGTTTCTTACTGGGATG
. : . : . : . : . : . :
rJMFF011N14+ GGGAATCACTATCGGTGCAGGCTTGGCCTCTTACCCGATTGATACTGTGCGAAGAAGGAT
rJMFF003I04+ GGGAATCACTATCGGTGCAGGCTTGGCCTCTTACCCGATTGATACTGTGCGAAGAAGGAT
rJMFF036M16+ GGGAATCACTATCGGTGCAGGCTTGGCCTCTTACCCGATTGATACTGTGCGAAGAAGGAT
rJMFF045H24+ GGGAATCACTATCGGTGCAGGCTTGGCCTCTTACCCGATTGATACTGTGCGAAGAAGGAT
____________________________________________________________
consensus GGGAATCACTATCGGTGCAGGCTTGGCCTCTTACCCGATTGATACTGTGCGAAGAAGGAT
. : . : . : . : . : . :
rJMFF011N14+ GATGATGACATCTGGAGAGGCGGTCAAATACAAGGGCTCGATGGATGCCTTTTCTCAGAT
rJMFF003I04+ GATGATGACATCTGGAGAGGCGGTCAAATACAAGGGCTCGATGGATGCCTTTTCTCAGAT
rJMFF036M16+ GATGATGACATCTGGAGAGGCGGTCAAATACAAGGGCTCGATGGATGCCTTTTCTCAGAT
rJMFF045H24+ GATGATGACATCTGGAGAGGCGGTCAAATACAAGGGCTCGATGGATGCCTTTTCTCAGAT
____________________________________________________________
consensus GATGATGACATCTGGAGAGGCGGTCAAATACAAGGGCTCGATGGATGCCTTTTCTCAGAT
. : . : . : . : . : . :
rJMFF011N14+ AATAAAGAAAGAAGGCAGCAAGTCACTTTTCAAGGGAGCCGGAGCCAACATTCTGCGAGC
rJMFF003I04+ AATAAAGAAAGAAGGCAGCAAGTCACTTTTCAAGGGAGCCGGAGCCAACATTCTGCGAGC
rJMFF036M16+ AATAAAGAAAGAAGGCAGCAAGTCACTTTTCAAGGGAGCCGGAGCCAACATTCTGCGAGC
rJMFF045H24+ AATAAAGAAAGAAGGCAGCAAGTCACTTTTCAAGGGAGCCGGAGCCAACATTCTGCGAGC
JMFN039A23- CAACATTCTGCGAGC
____________________________________________________________
consensus AATAAAGAAAGAAGGCAGCAAGTCACTTTTCAAGGGAGCCGGAGCCAACATTCTGCGAGC
. : . : . : . : . : . :
rJMFF011N14+ TGTTGCTGGTGCCGGTGTGCTAGCTGGGTACGACAAGTTGCAGCTCATCGTTCTTGGAAA
rJMFF003I04+ TGTTGCTGGTGCCGGTGTGCTAGCTGGGTACGACAAGTTGCAGCTCATCGTTCTTGGAAA
rJMFF036M16+ TGTTGCTGGTGCCGGTGTGCTAGCTGGGTACGACAAGTTGCAGCTCATCGTTCTTGGAAA
rJMFF045H24+ TGTTGCTGGTGCCGGTGTGCTAGCTGGGTACGACAAGTTGCAGCTCATCGTTCTTGGAAA
JMFN039A23- TGTTGCTGGTGCCGGTGTGCTAGCTGGGTACGACAAGTTGCAGCTCATCGTTCTTGGAAA
____________________________________________________________
consensus TGTTGCTGGTGCCGGTGTGCTAGCTGGGTACGACAAGTTGCAGCTCATCGTTCTTGGAAA
. : . : . : . : . : . :
rJMFF011N14+ GAAATACGGAAGTGGTGGCGGTGGTTAATATCCATCGTCCATCCAGAAAGCGCGATAATG
rJMFF003I04+ GAAATACGGAAGTGGTGGCGGTGGTTAATATCCATCGTCCATCCAGAAAGCGCGATAATG
rJMFF036M16+ GAAA-ATGGAAGTGGTGGCGGTGGTTAATATCCATCGTCCATCCAGAGAGCGCGATAATG
rJMFF045H24+ GAAATACGGAAGTGGTGGCGGTGGTTAATATCCATCGTCCATCCAGAAAGCGCGATAATG
JMFN039A23- GAAATACGGAAGTGGTGGCGGTGGTTAATATCCATCGTCCATCCAGAAAGCGCGATAATG
____________________________________________________________
consensus GAAATACGGAAGTGGTGGCGGTGGTTAATATCCATCGTCCATCCAGAAAGCGCGATAATG
. : . : . : . : . : . :
rJMFF011N14+ ACGATAAGTGAAAGTAACAACCTGTGTAGGTTTTCTCAGCTCCTTCCTTTACTTTCAATA
rJMFF003I04+ ACGATAAGTGAAAGTAACAACCTGTGTAGGTTTTCTCAGCTCCTTCCTTTACTTTCAATA
rJMFF036M16+ ACGATAAGTGAAAGTAACAACCTGTGTAGGTTTTCTCAGCTCCTTCCTTTACTTTCAATA
rJMFF045H24+ ACGATAAGTGAAAGTAACAACCTGTGTAGGTTTTCTCAGCTCCTTCCTTTACTTTCAATA
JMFN039A23- ACGATAAGTGAAAGTAACAACCTGTGTAGGTTTTCTCAGCTCCTTCCTTTACTTTCAATA
____________________________________________________________
consensus ACGATAAGTGAAAGTAACAACCTGTGTAGGTTTTCTCAGCTCCTTCCTTTACTTTCAATA
. : . : . : . : . : . :
rJMFF011N14+ ATGTTGGGGAACAATGTAACTGCCCAGTGGTTGTTTAGGATCCCAGATGGTCAACATAGA
rJMFF003I04+ ATGTTGGGGAACAATGTAACTGCCCAGTGGTTGTTTAGGATCCCAGATGGTCAACATAGA
rJMFF036M16+ ATGTTGGGGAACAATGTAACTGCCCAGTGGTTGTTTAGGATCCCAGATGGTCAACATAGA
rJMFF045H24+ ATGTTGGGGAACAATGTAACTGCCCAGTGGTTGTTTAGGATCCCAGATGGTCAACATAGA
JMFN039A23- ATGTTGGGGAACAATGTAACTGCCCAGTGGTTGTTTAGGATCCCAGATGGTCAACATAGA
____________________________________________________________
consensus ATGTTGGGGAACAATGTAACTGCCCAGTGGTTGTTTAGGATCCCAGATGGTCAACATAGA
. : . : . : . : . : . :
rJMFF011N14+ TTGAACAATTAATGTTGTTATGCAGTGTCAGACCTCAGATGGTTTTCTTGTATATATC
rJMFF003I04+ TTGAACAATTAATGTTGTTATGCAGTGTCAGACCTCAGATGGTTTTCTTGTATATATCTA
rJMFF036M16+ TTGAACAATTAATGTTGTTATGCAGTGTCAGACCTCAGATGGTTTTCTTGTATATATCTA
rJMFF045H24+ TTGAACAATTAATGTTGTTATGCAGTGTCAGACCTCAGATGGTTTTCTTGTATATATCTA
JMFN039A23- TTGAACAATTAATGTTGTTATGCAGTGTCAGACCTCAGATGGTTTTCTTGTATATATCTA
____________________________________________________________
consensus TTGAACAATTAATGTTGTTATGCAGTGTCAGACCTCAGATGGTTTTCTTGTATATATCTA
. : . : . : . : . : . :
rJMFF003I04+ TATATATATAGTTGTTGCAGCAAAGAA
rJMFF036M16+ TATATATATAGTTGTTGCAGCAAAGAA
rJMFF045H24+ TATATATATAGTTGTTGCAGCAAAGAATAAATAGTTTTACCTTTCAGGTT
JMFN039A23- TATATATATAGTTGTTGCAGCAAAGAATAAATAGTTTTACCTTTCAGGTTXXXXXXXXXX
____________________________________________________________
consensus TATATATATAGTTGTTGCAGCAAAGAATAAATAGTTTTACCTTTCAGGTTNNNNNNNNNN
. : . : . : . : . : . :
JMFN039A23- XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
____________________________________________________________
consensus NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
. : . : . : . : . : . :
JMFN039A23- XXXXXXXXXXXXXXGAGGAAACCCCCCCCCAAAAAAAAAAAAATTTCGGGGGGGGGCCCG
____________________________________________________________
consensus NNNNNNNNNNNNNNGAGGAAACCCCCCCCCAAAAAAAAAAAAATTTCGGGGGGGGGCCCG