Contig 008962:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN003G07Sequence627008962 (2)emb|CDP05827.1|4e-65unnamed protein product [Coffea canephora]
JMFN038B07Sequence609008962 (2)emb|CDP05827.1|5e-61unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMFN003G07+                                                             AATAATGCTA
                      ____________________________________________________________
consensus                                                               AATAATGCTA
 
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JMFN003G07+           CTGTTTGTGTTTTTGATTTTATTCTACTGAAACAGCAACCCAATACATACAGAAGAAGTA
JMFN038B07+                                                             AGAAGAAGTA
                      ____________________________________________________________
consensus             CTGTTTGTGTTTTTGATTTTATTCTACTGAAACAGCAACCCAATACATACAGAAGAAGTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN003G07+           AGCATCTTTTCTATCTTTGAGCTTCAAATAATCCCTTCTCCGCCTTCCTGCTTTTCTTCT
JMFN038B07+           AGCATCTTTTCTATCTTTGAGCTTCAAATAATCCCTTCTCCGCCTTCCTGC-TTTCTTCT
                      ____________________________________________________________
consensus             AGCATCTTTTCTATCTTTGAGCTTCAAATAATCCCTTCTCCGCCTTCCTGCTTTTCTTCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN003G07+           TCAACCCCAAACCCCCTGCATCTTTTTTGCAGTCTGGGGGGTCTTCAAAGAGGGAAAGGG
JMFN038B07+           TCAACCCCAAACCCCCTGCATCTTTTTTGCAGTCTGGGGGGTCTTCAAAGAGGGAAAGGG
                      ____________________________________________________________
consensus             TCAACCCCAAACCCCCTGCATCTTTTTTGCAGTCTGGGGGGTCTTCAAAGAGGGAAAGGG
 
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JMFN003G07+           AGAGCTGTTTGTGAGCCAAGCCAATATCAATGAGAATGAGGCCAGAAGAAGGGTCATCAA
JMFN038B07+           AGAGCTGTTTGTGAGCCAAGCCAATATCAATGAGAATGAGGCCAGAAGAAGGGTCATCAA
                      ____________________________________________________________
consensus             AGAGCTGTTTGTGAGCCAAGCCAATATCAATGAGAATGAGGCCAGAAGAAGGGTCATCAA
 
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JMFN003G07+           CGATGATGTCTTTGACAGGGAGCCAAACAAAGAGCTCTTCCTGGGAGAAGCCCTGAACGC
JMFN038B07+           CGATGATGTCTTTGACAGGGAGCCAAACAAAGAGCTCTTCCTGGGAGAAGCCCTGAACGC
                      ____________________________________________________________
consensus             CGATGATGTCTTTGACAGGGAGCCAAACAAAGAGCTCTTCCTGGGAGAAGCCCTGAACGC
 
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JMFN003G07+           CAGTGAGGCAACCATGGGTGAGATTAGCAGTGACCACACTGTCATAGAAGGCCATGGTGT
JMFN038B07+           CAGTGAGGCAACCATGGGTGAGATTAGCAGTGACCACACTGTCATAGAAGGCCATGGTGT
                      ____________________________________________________________
consensus             CAGTGAGGCAACCATGGGTGAGATTAGCAGTGACCACACTGTCATAGAAGGCCATGGTGT
 
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JMFN003G07+           CAAATTTGGTGAGACAAGGCTCATCAAGGAAGACTTGAAGAAGCCCAGATTCTGATACAG
JMFN038B07+           CAAATTTGGTGAGACAAGGCTCATCAAGGAAGACTTGAAGAAGCCCAGATTCTGATACAG
                      ____________________________________________________________
consensus             CAAATTTGGTGAGACAAGGCTCATCAAGGAAGACTTGAAGAAGCCCAGATTCTGATACAG
 
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JMFN003G07+           TGTAGTTGCTCACTTCCTTTGGGAACAGACCTGCTGGCAACCCCTTTGACTTTAGAAGAT
JMFN038B07+           TGTAGTTGCTCACTTCCTTTGGGAACAGACCTGCTGGCAACCCCTTTGACTTTAGAAGAT
                      ____________________________________________________________
consensus             TGTAGTTGCTCACTTCCTTTGGGAACAGACCTGCTGGCAACCCCTTTGACTTTAGAAGAT
 
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JMFN003G07+           CATGGATGGAGATGGAGAGACATGGAGGGCAAAATAGGAAAGCCAAAAAGAAGAGGAAGA
JMFN038B07+           CATGGATGGAGATGGAGAGACATGGAGGGCAAAATAGGAAAGCCAAAAAGAAGAGGAAGA
                      ____________________________________________________________
consensus             CATGGATGGAGATGGAGAGACATGGAGGGCAAAATAGGAAAGCCAAAAAGAAGAGGAAGA
 
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JMFN003G07+           GGTTTTGGAAGGCTGCCATGGATGGATGGAGATCAGAGCTTAAGTTCTCTCACTTTCTTG
JMFN038B07+           GGTTTTGGAAGGCTGCCATGGATGGATGGAGATCAGAGCTTAAGTTCTCTCACTTTCTTG
                      ____________________________________________________________
consensus             GGTTTTGGAAGGCTGCCATGGATGGATGGAGATCAGAGCTTAAGTTCTCTCACTTTCTTG
 
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JMFN003G07+           GGGAAGACAGGGTTTAA                                           
JMFN038B07+           GGGAAGACAGGGTTTAAGGGAAGTGTGAATAATGAGTATAGAATGAAGTATGTTTTGGAG
                      ____________________________________________________________
consensus             GGGAAGACAGGGTTTAAGGGAAGTGTGAATAATGAGTATAGAATGAAGTATGTTTTGGAG