Contig 008961:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN036M18Sequence573008961 (5)ref|XP_009776207.1|6e-70PREDICTED: heme-binding protein 2 [Nicotiana sylvestris]
JMFS055G03Sequence483008961 (5)emb|CDP06084.1|2e-57unnamed protein product [Coffea canephora]
JMFS159C09Sequence464008961 (5)ref|XP_009776207.1|2e-56PREDICTED: heme-binding protein 2 [Nicotiana sylvestris]
JMSF001G01Sequence365008961 (5)ref|XP_010092719.1|1e-53hypothetical protein L484_024614 [Morus notabilis] gb|EXB52064.1| hypothetical p522008961 (5)emb|CDP06084.1|4e-73unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS055G03+ CAAA
                      ____________________________________________________________
consensus CAAA
 
. : . : . : . : . : . :
JMFS055G03+ TCCATATTTATTATTACTCCGTACTACTTATTAGAACAACAGTAACAACATTATATGAAA
rJMSF001G01- ACAGTAACAACATTATATGAAA
                      ____________________________________________________________
consensus TCCATATTTATTATTACTCCGTACTACTTATTAGAACAACAGTAACAACATTATATGAAA
 
. : . : . : . : . : . :
JMFS055G03+ ATTAAAGCCGCATATATACAGATTTAGCAGCAGCATCATCGTACAGATCAAACGTGAACC
rJMSF001G01- ATTAAAGCCGCATATATACAGATTTAGCAGCAGCATCATCGTACAGATCAAACGTGAACC
                      ____________________________________________________________
consensus ATTAAAGCCGCATATATACAGATTTAGCAGCAGCATCATCGTACAGATCAAACGTGAACC
 
. : . : . : . : . : . :
JMFS055G03+ AAACCTCGTTAACTCTGCCCTCGAACTCAAACGGGGAGTTGTACTGCGCCACCGCGTACA
rJMSF001G01- AAACCTCGTTAACTCTGCCCTCGAACTCAAACGGGGAGTTGTACTGCGCCACCGCGTACA
                      ____________________________________________________________
consensus AAACCTCGTTAACTCTGCCCTCGAACTCAAACGGGGAGTTGTACTGCGCCACCGCGTACA
 
. : . : . : . : . : . :
JMFS055G03+ TGGTGGCGTTTTCTCCGCCGTGGCTTTTCATGATGGCGTCCAGCCACACCGTCCCTTGCA
rJMSF001G01- TGGTGGCGTTTTCTCCGCCGTGGCTTTTCATGATGGCGTCCAGCCACACCGTCCCTTGCA
JMSF001G01+ CGCCGTGGCTTTTCATGATGGCGTCCAGCCACACCGTCCCTTGCA
                      ____________________________________________________________
consensus TGGTGGCGTTTTCTCCGCCGTGGCTTTTCATGATGGCGTCCAGCCACACCGTCCCTTGCA
 
. : . : . : . : . : . :
JMFS055G03+ GGCTACCACTCAGCGCCGCCGCTTCCTTCCCCACATCGGAATCCGACACAAAACCTCCGA
rJMSF001G01- GGCTACCACTCAGCGCCGCCGCTTCCTTCCCCACATCGGAATCCGACACAAAACCTCCGA
JMSF001G01+ GGCTACCACTCAGCGCCGCCGCTTCCTTCCCCACATCGGAATCCGACACAAAACCTCCGA
JMFN036M18+ TCCCCACATCGGAATCCGACACAAAACCTCCGA
                      ____________________________________________________________
consensus GGCTACCACTCAGCGCCGCCGCTTCCTTCCCCACATCGGAATCCGACACAAAACCTCCGA
 
. : . : . : . : . : . :
JMFS055G03+ ATTGCCTCACGGCCACGTACGTTTCCCCCCATTTCTGCGCGTGCAGGGATTGCGCCGGCG
rJMSF001G01- ATTGCCTCACGGCCACGTACGTTTCCCCCCATTTCTGCGCGTGCAGGGATTGCGCCGGCG
JMSF001G01+ ATTGCCTCACGGCCACGTACGTTTCCCCCCATTTCTGCGCGTGCAGGGATTGCGCCGGCG
JMFN036M18+ ATTGCCTCACGGCCACGTACGTTTCCCCCCATTTCTGCGCGTGCAGGGATTGCGCCGGCG
                      ____________________________________________________________
consensus ATTGCCTCACGGCCACGTACGTTTCCCCCCATTTCTGCGCGTGCAGGGATTGCGCCGGCG
 
. : . : . : . : . : . :
JMFS055G03+ GCGGATTTGCCTGGTTCGCCTTCGGAACGTAGAAGCTCACCACGAACGATGATGCACAAA
rJMSF001G01- GCGGATTTGCCTGGTTCGCCTTCGGAACGTAGAAGCTCACCACGAACGATGATGCACAAA
JMSF001G01+ GCGGATTTGCCTGGTTCGCCTTCGGAACGTAGAAGCTCACCACGAACGATGATGCACAAA
JMFS159C09+ TGGTTCGCCTTCGGAACGTAGAAGCTCACCACGAACGATGATGCACAAA
JMFN036M18+ GCGGATTTGCCTGGTTCGCCTTCGGAACGTAGAAGCTCACCACGAACGATGATGCACAAA
                      ____________________________________________________________
consensus GCGGATTTGCCTGGTTCGCCTTCGGAACGTAGAAGCTCACCACGAACGATGATGCACAAA
 
. : . : . : . : . : . :
JMFS055G03+ ACGGTCCATCGCTGGGCTTCACTTCCGTCAATACTGGCGCTGTCATCTCTATTTTCTCA
rJMSF001G01- ACGGTCCATCGCTGGGCTTCACTTCCGTCAATACTGGCGCTGTCATCTCTATTTTCTCAT
JMSF001G01+ ACGGTCCATCGCTGGGCTTCACTTCCGTCAATACTGGCGCTGTCATCTCTATTTTCTCAT
JMFS159C09+ ACGGTCCATCGCTGGGCTTCACTTCCGTCAATACTGGCGCTGTCATCTCTATTTTCTCAT
JMFN036M18+ ACGGTCCATCGCTGGGCTTCACTTCCGTCAATACTGGCGCTGTCATCTCTATTTTCTCAT
                      ____________________________________________________________
consensus ACGGTCCATCGCTGGGCTTCACTTCCGTCAATACTGGCGCTGTCATCTCTATTTTCTCAT
 
. : . : . : . : . : . :
rJMSF001G01- TGTAATAGTTCTCTCCTGAAATGTAATCAAACAAACGAAGGAAGCCGGTTCTTGTGGCTT
JMSF001G01+ TGTAATAGTTCTCTCCTGAAATGTAATCAAACAAACGAAGGAAGCCGGTTCTTGTGGCTT
JMFS159C09+ TGTAATAGTTCTCTCCTGAAATGTAATCAAACAAACGAAGGAAGCCGGTTCTTGTGGCTT
JMFN036M18+ TGTAATAGTTCTCTCCTGAAATGTAATCAAACAAACGAAGGAAGCCGGTTCTTGTGGCTT
                      ____________________________________________________________
consensus TGTAATAGTTCTCTCCTGAAATGTAATCAAACAAACGAAGGAAGCCGGTTCTTGTGGCTT
 
. : . : . : . : . : . :
rJMSF001G01- GAACAAGGGAGATATCATC
JMSF001G01+ GAACAAGGGAGATATCATC
JMFS159C09+ GAACAAGGGAGATATCATCAATGGGAGCGGTAGACATCCACATCGACGAATTATAGCGAC
JMFN036M18+ GAACAAGGGAGATATCATCAATGGGAGCGGTAGACATCCACATCGACGAATTATAGCGAC
                      ____________________________________________________________
consensus GAACAAGGGAGATATCATCAATGGGAGCGGTAGACATCCACATCGACGAATTATAGCGAC
 
. : . : . : . : . : . :
JMFS159C09+ GAATTTCGTAGTCTTTGCCAGCTTCGATCAGGTCATAGGTGGGACACTCGATCCGTTCGC
JMFN036M18+ GAATTTCGTAGTCTTTGCCAGCTTCGATCAGGTCATAGGTGGGACACTCGATCCGTTCGC
                      ____________________________________________________________
consensus GAATTTCGTAGTCTTTGCCAGCTTCGATCAGGTCATAGGTGGGACACTCGATCCGTTCGC
 
. : . : . : . : . : . :
JMFS159C09+ AGGTCGGAGGAAACAGACCAAGCTGCTGCACATGATGATTCTTAGCATTGATTGAGGTTG
JMFN036M18+ AGGTCGGAGGAAACAGACCAAGCTGCTGCACATGATGATTCTTAGCATTGATTGAGGTTG
                      ____________________________________________________________
consensus AGGTCGGAGGAAACAGACCAAGCTGCTGCACATGATGATTCTTAGCATTGATTGAGGTTG
 
. : . : . : . : . : . :
JMFS159C09+ TTGAAGTAGTGCTGATGGTCCAAGAATGGTGGACGAAGTAGTTGATCAGAATCACAACTA
JMFN036M18+ TTGAAGTAGTGCTGATGGTCCAAGAATGGTGGACGAAGTAGTTGATCAGAATCACAACTA
                      ____________________________________________________________
consensus TTGAAGTAGTGCTGATGGTCCAAGAATGGTGGACGAAGTAGTTGATCAGAATCACAACTA
 
. : . : . : . : . : . :
JMFS159C09+ GCTTAACCCAATCCAACATTTTTCTTGGATGCCCCAAAATGGAAGGATGATTGGA
JMFN036M18+ GCTTAACCCAATCCAACATTTTTCTTGGATGCCCCAAAATGGAAGGATGATTGGAGAAAT
                      ____________________________________________________________
consensus GCTTAACCCAATCCAACATTTTTCTTGGATGCCCCAAAATGGAAGGATGATTGGAGAAAT