Contig 008961:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN036M18Sequence573008961 (5)ref|XP_009776207.1|6e-70PREDICTED: heme-binding protein 2 [Nicotiana sylvestris]
JMFS055G03Sequence483008961 (5)emb|CDP06084.1|2e-57unnamed protein product [Coffea canephora]
JMFS159C09Sequence464008961 (5)ref|XP_009776207.1|2e-56PREDICTED: heme-binding protein 2 [Nicotiana sylvestris]
JMSF001G01Sequence365008961 (5)ref|XP_010092719.1|1e-53hypothetical protein L484_024614 [Morus notabilis] gb|EXB52064.1| hypothetical p522008961 (5)emb|CDP06084.1|4e-73unnamed protein product [Coffea canephora]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS055G03+                                                                   CAAA
                      ____________________________________________________________
consensus                                                                     CAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS055G03+           TCCATATTTATTATTACTCCGTACTACTTATTAGAACAACAGTAACAACATTATATGAAA
rJMSF001G01-                                                ACAGTAACAACATTATATGAAA
                      ____________________________________________________________
consensus             TCCATATTTATTATTACTCCGTACTACTTATTAGAACAACAGTAACAACATTATATGAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS055G03+           ATTAAAGCCGCATATATACAGATTTAGCAGCAGCATCATCGTACAGATCAAACGTGAACC
rJMSF001G01-          ATTAAAGCCGCATATATACAGATTTAGCAGCAGCATCATCGTACAGATCAAACGTGAACC
                      ____________________________________________________________
consensus             ATTAAAGCCGCATATATACAGATTTAGCAGCAGCATCATCGTACAGATCAAACGTGAACC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS055G03+           AAACCTCGTTAACTCTGCCCTCGAACTCAAACGGGGAGTTGTACTGCGCCACCGCGTACA
rJMSF001G01-          AAACCTCGTTAACTCTGCCCTCGAACTCAAACGGGGAGTTGTACTGCGCCACCGCGTACA
                      ____________________________________________________________
consensus             AAACCTCGTTAACTCTGCCCTCGAACTCAAACGGGGAGTTGTACTGCGCCACCGCGTACA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS055G03+           TGGTGGCGTTTTCTCCGCCGTGGCTTTTCATGATGGCGTCCAGCCACACCGTCCCTTGCA
rJMSF001G01-          TGGTGGCGTTTTCTCCGCCGTGGCTTTTCATGATGGCGTCCAGCCACACCGTCCCTTGCA
JMSF001G01+                          CGCCGTGGCTTTTCATGATGGCGTCCAGCCACACCGTCCCTTGCA
                      ____________________________________________________________
consensus             TGGTGGCGTTTTCTCCGCCGTGGCTTTTCATGATGGCGTCCAGCCACACCGTCCCTTGCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS055G03+           GGCTACCACTCAGCGCCGCCGCTTCCTTCCCCACATCGGAATCCGACACAAAACCTCCGA
rJMSF001G01-          GGCTACCACTCAGCGCCGCCGCTTCCTTCCCCACATCGGAATCCGACACAAAACCTCCGA
JMSF001G01+           GGCTACCACTCAGCGCCGCCGCTTCCTTCCCCACATCGGAATCCGACACAAAACCTCCGA
JMFN036M18+                                      TCCCCACATCGGAATCCGACACAAAACCTCCGA
                      ____________________________________________________________
consensus             GGCTACCACTCAGCGCCGCCGCTTCCTTCCCCACATCGGAATCCGACACAAAACCTCCGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS055G03+           ATTGCCTCACGGCCACGTACGTTTCCCCCCATTTCTGCGCGTGCAGGGATTGCGCCGGCG
rJMSF001G01-          ATTGCCTCACGGCCACGTACGTTTCCCCCCATTTCTGCGCGTGCAGGGATTGCGCCGGCG
JMSF001G01+           ATTGCCTCACGGCCACGTACGTTTCCCCCCATTTCTGCGCGTGCAGGGATTGCGCCGGCG
JMFN036M18+           ATTGCCTCACGGCCACGTACGTTTCCCCCCATTTCTGCGCGTGCAGGGATTGCGCCGGCG
                      ____________________________________________________________
consensus             ATTGCCTCACGGCCACGTACGTTTCCCCCCATTTCTGCGCGTGCAGGGATTGCGCCGGCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS055G03+           GCGGATTTGCCTGGTTCGCCTTCGGAACGTAGAAGCTCACCACGAACGATGATGCACAAA
rJMSF001G01-          GCGGATTTGCCTGGTTCGCCTTCGGAACGTAGAAGCTCACCACGAACGATGATGCACAAA
JMSF001G01+           GCGGATTTGCCTGGTTCGCCTTCGGAACGTAGAAGCTCACCACGAACGATGATGCACAAA
JMFS159C09+                      TGGTTCGCCTTCGGAACGTAGAAGCTCACCACGAACGATGATGCACAAA
JMFN036M18+           GCGGATTTGCCTGGTTCGCCTTCGGAACGTAGAAGCTCACCACGAACGATGATGCACAAA
                      ____________________________________________________________
consensus             GCGGATTTGCCTGGTTCGCCTTCGGAACGTAGAAGCTCACCACGAACGATGATGCACAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS055G03+           ACGGTCCATCGCTGGGCTTCACTTCCGTCAATACTGGCGCTGTCATCTCTATTTTCTCA 
rJMSF001G01-          ACGGTCCATCGCTGGGCTTCACTTCCGTCAATACTGGCGCTGTCATCTCTATTTTCTCAT
JMSF001G01+           ACGGTCCATCGCTGGGCTTCACTTCCGTCAATACTGGCGCTGTCATCTCTATTTTCTCAT
JMFS159C09+           ACGGTCCATCGCTGGGCTTCACTTCCGTCAATACTGGCGCTGTCATCTCTATTTTCTCAT
JMFN036M18+           ACGGTCCATCGCTGGGCTTCACTTCCGTCAATACTGGCGCTGTCATCTCTATTTTCTCAT
                      ____________________________________________________________
consensus             ACGGTCCATCGCTGGGCTTCACTTCCGTCAATACTGGCGCTGTCATCTCTATTTTCTCAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF001G01-          TGTAATAGTTCTCTCCTGAAATGTAATCAAACAAACGAAGGAAGCCGGTTCTTGTGGCTT
JMSF001G01+           TGTAATAGTTCTCTCCTGAAATGTAATCAAACAAACGAAGGAAGCCGGTTCTTGTGGCTT
JMFS159C09+           TGTAATAGTTCTCTCCTGAAATGTAATCAAACAAACGAAGGAAGCCGGTTCTTGTGGCTT
JMFN036M18+           TGTAATAGTTCTCTCCTGAAATGTAATCAAACAAACGAAGGAAGCCGGTTCTTGTGGCTT
                      ____________________________________________________________
consensus             TGTAATAGTTCTCTCCTGAAATGTAATCAAACAAACGAAGGAAGCCGGTTCTTGTGGCTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF001G01-          GAACAAGGGAGATATCATC                                         
JMSF001G01+           GAACAAGGGAGATATCATC                                         
JMFS159C09+           GAACAAGGGAGATATCATCAATGGGAGCGGTAGACATCCACATCGACGAATTATAGCGAC
JMFN036M18+           GAACAAGGGAGATATCATCAATGGGAGCGGTAGACATCCACATCGACGAATTATAGCGAC
                      ____________________________________________________________
consensus             GAACAAGGGAGATATCATCAATGGGAGCGGTAGACATCCACATCGACGAATTATAGCGAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS159C09+           GAATTTCGTAGTCTTTGCCAGCTTCGATCAGGTCATAGGTGGGACACTCGATCCGTTCGC
JMFN036M18+           GAATTTCGTAGTCTTTGCCAGCTTCGATCAGGTCATAGGTGGGACACTCGATCCGTTCGC
                      ____________________________________________________________
consensus             GAATTTCGTAGTCTTTGCCAGCTTCGATCAGGTCATAGGTGGGACACTCGATCCGTTCGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS159C09+           AGGTCGGAGGAAACAGACCAAGCTGCTGCACATGATGATTCTTAGCATTGATTGAGGTTG
JMFN036M18+           AGGTCGGAGGAAACAGACCAAGCTGCTGCACATGATGATTCTTAGCATTGATTGAGGTTG
                      ____________________________________________________________
consensus             AGGTCGGAGGAAACAGACCAAGCTGCTGCACATGATGATTCTTAGCATTGATTGAGGTTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS159C09+           TTGAAGTAGTGCTGATGGTCCAAGAATGGTGGACGAAGTAGTTGATCAGAATCACAACTA
JMFN036M18+           TTGAAGTAGTGCTGATGGTCCAAGAATGGTGGACGAAGTAGTTGATCAGAATCACAACTA
                      ____________________________________________________________
consensus             TTGAAGTAGTGCTGATGGTCCAAGAATGGTGGACGAAGTAGTTGATCAGAATCACAACTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS159C09+           GCTTAACCCAATCCAACATTTTTCTTGGATGCCCCAAAATGGAAGGATGATTGGA     
JMFN036M18+           GCTTAACCCAATCCAACATTTTTCTTGGATGCCCCAAAATGGAAGGATGATTGGAGAAAT
                      ____________________________________________________________
consensus             GCTTAACCCAATCCAACATTTTTCTTGGATGCCCCAAAATGGAAGGATGATTGGAGAAAT