Contig 008958:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF006C04Sequence486008958 (5)ref|XP_009799759.1|171PREDICTED: uncharacterized protein LOC104245788 [Nicotiana sylvestris]645008958 (5)ref|XP_009799759.1|165PREDICTED: uncharacterized protein LOC104245788 [Nicotiana sylvestris]
JMFF013A19Sequence506008958 (5)gb|ABU45171.1|3e-42unknown [Solanum melongena]
JMFN019O04Sequence546008958 (5)ref|XP_009799759.1|171PREDICTED: uncharacterized protein LOC104245788 [Nicotiana sylvestris]
JMFN034O24Sequence570008958 (5)ref|XP_009799759.1|171PREDICTED: uncharacterized protein LOC104245788 [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMFF013A19-                  TATAAATTCAGAAATTCAAGTTGTCATTAGCAGGCTGAGAAAATATATGGTA
rJMFF006C04-                  TATAAATTCAGAAATTCAAGTTGTCATTAGCAGGCTGAGAAAATATAT-GTA
                      ____________________________________________________________
consensus                     TATAAATTCAGAAATTCAAGTTGTCATTAGCAGGCTGAGAAAATATATGGTA
 
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rJMFF013A19-          TATTGAAGTTGAGCATANATTAAGGTAATTCCGAAACAAAATCGTAGTGTTATCGATTCA
rJMFF006C04-          TATTGAAGTTGAGCATANATTAAGGTAATTCCGAAACAAAATCGTAGTGTTATCGATTCA
JMFN034O24+                                         CCGAAACAAAATCGTAGTGTTATCGATTCA
                      ____________________________________________________________
consensus             TATTGAAGTTGAGCATANATTAAGGTAATTCCGAAACAAAATCGTAGTGTTATCGATTCA
 
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rJMFF013A19-          AGTCAAGAATTAAATANAAACACTTATTTTTCCAACAACTACACCAGAGAATATCAACAA
rJMFF006C04-          AGTCAAGAATTAAATANAAACACTTATTTTTCCAACAACTACACCAGAGAATATCAACAA
JMFF006C04+                                                           GAATATCAACAA
JMFN034O24+           AGTCAAGAATTAAATAGAAACACTTATTTTTCCAACAACTACACCAGAGAATATCAACAA
                      ____________________________________________________________
consensus             AGTCAAGAATTAAATAGAAACACTTATTTTTCCAACAACTACACCAGAGAATATCAACAA
 
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rJMFF013A19-          TCAGGATCAGCATCAGCGGCCTTCCTCTAAAAGCCCTAATTGACAAATCGCANATGCANA
rJMFF006C04-          TCAGGATCAGCATCAGCGGCCTTCCTCTAAAAGCCCTAATTGACAAATCGCANATGCANA
JMFF006C04+           TCAGGATCAGCATCAGCGGCCTTCCTCTAAAAGCCCTAATTGACAAATCGCAGATGCAGA
JMFN034O24+           TCAGGATCAGCATCAGCGGCCTTCCTCTAAAAGCCCTAATTGACAAATCGCAGATGCAGA
                      ____________________________________________________________
consensus             TCAGGATCAGCATCAGCGGCCTTCCTCTAAAAGCCCTAATTGACAAATCGCAGATGCAGA
 
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rJMFF013A19-          TGGATCCACCAATCTTTCAATCGGAATCATCACTGGACTCTTGTTCNAGGCGTTTAANAG
rJMFF006C04-          TGGATCCACCAATCTTTCAATCGGAATCATCACTGGACTCTTGTTCNAGGCGTTTAANAG
JMFF006C04+           TGGATCCACCAATCTTTCAATCGGAATCATCACTGGACTCTTGTTCGAGGCGTTTAAGAG
JMFN034O24+           TGGATCCACCAATCTTTCAATCGGAATCATCACTGGACTCTTGTTCGAGGCGTTTAAGAG
                      ____________________________________________________________
consensus             TGGATCCACCAATCTTTCAATCGGAATCATCACTGGACTCTTGTTCGAGGCGTTTAAGAG
 
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rJMFF013A19-          CTTCACCGTGGGCCCAGGTCTCGATTGTGANATCGGGCTTGGCGTTAAGGCCGACGCCGA
rJMFF006C04-          CTTCACCGTGGGCCCAGGTCTCGATTGTGANATCGGGCTTGGCGTTAAGGCCGACGCCGA
JMFN019O04+                   TGGGCCCAGGTCTCGATTGTGAGATCGGGCTTGGCGTTAAGGCCGACGCCGA
JMFF006C04+           CTTCACCGTGGGCCCAGGTCTCGATTGTGAGATCGGGCTTGGCGTTAAGGCCGACGCCGA
JMFN034O24+           CTTCACCGTGGGCCCAGGTCTCGATTGTGAGATCGGGCTTGGCGTTAAGGCCGACGCCGA
                      ____________________________________________________________
consensus             CTTCACCGTGGGCCCAGGTCTCGATTGTGAGATCGGGCTTGGCGTTAAGGCCGACGCCGA
 
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rJMFF013A19-          GGATGACNATGGTGAGGAAGCTGGTGACGTAGCAGGGGAGCTCCCAATCCTCCCACTTGC
rJMFF006C04-          GGATGACNATGGTGAGGAAGCTGGTGACGTAGCAGGGGAGCTCCCAATCCTCCCACTTGC
JMFN019O04+           GGATGACGATGGTGAGGAAGCTGGTGACGTAGCAGGGGAGCTCCCAATCCTCCCACTTGC
JMFF006C04+           GGATGACGATGGTGAGGAAGCTGGTGACGTAGCAGGGGAGCTCCCAATCCTCCCACTTGC
JMFN034O24+           GGATGACGATGGTGAGGAAGCTGGTGACGTAGCAGGGGAGCTCCCAATCCTCCCACTTGC
                      ____________________________________________________________
consensus             GGATGACGATGGTGAGGAAGCTGGTGACGTAGCAGGGGAGCTCCCAATCCTCCCACTTGC
 
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rJMFF013A19-          GGGACTGTCCGGGGGGCAGCGGGGTCCGGTTGAANAGGTAGCCGTTGGGGCGCTCCTGGT
rJMFF006C04-          GGGACTGTCCGGGGGGCAGCGGGGTCCGGTTGAANAGGTAGCCGTTGGGGCGCTCCTGGT
JMFN019O04+           GGGACTGTCCGGGGGGCAGCGGGGTCCGGTTGAAGAGGTAGCCGTTGGGGCGCTCCTGGT
JMFF006C04+           GGGACTGTCCGGGGGGCAGCGGGGTCCGGTTGAAGAGGTAGCCGTTGGGGCGCTCCTGGT
JMFN034O24+           GGGACTGTCCGGGGGGCAGCGGGGTCCGGTTGAAGAGGTAGCCGTTGGGGCGCTCCTGGT
                      ____________________________________________________________
consensus             GGGACTGTCCGGGGGGCAGCGGGGTCCGGTTGAAGAGGTAGCCGTTGGGGCGCTCCTGGT
 
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rJMFF013A19-          GGCCGGGAGTGAGGAAAGGGTTGGGGCCATGGCC                          
rJMFF006C04-          GGCCGGGAGTGAGGAAAGGGTTGGGGCCATGGCCTCCTCGCGTGCGGAGGCCGGAGCTCA
JMFN019O04+           GGCCGGGAGTGAGGAAAGGGTTGGGGCCATGGCCTCCTCGCGTGCGGAGGCCGGAGCTCA
JMFF006C04+           GGCCGGGAGTGAGGAAAGGGTTGGGGCCATGGCCTCCTCGCGTGCGGAGGCCGGAGCTCA
JMFN034O24+           GGCCGGGAGTGAGGAAAGGGTTGGGGCCATGGCCTCCTCGCGTGCGGAGGCCGGAGCTCA
                      ____________________________________________________________
consensus             GGCCGGGAGTGAGGAAAGGGTTGGGGCCATGGCCTCCTCGCGTGCGGAGGCCGGAGCTCA
 
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rJMFF006C04-          GGCGGGTTCTCAGCATACCGGCGGCGTTCGCGAAGGGTTTCGCGGATGGCATCTTTGATG
JMFN019O04+           GGCGGGTTCTCAGCATACCGGCGGCGTTCGCGAAGGGTTTCGCGGATGGCATCTTTGATG
JMFF006C04+           GGCGGGTTCTCAGCATACCGGCGGCGTTCGCGAAGGGTTTCGCGGATGGCATCTTTGATG
JMFN034O24+           GGCGGGTTCTCAGCATACCGGCGGCGTTCGCGAAGGGTTTCGCGGATGGCATCTTTGATG
                      ____________________________________________________________
consensus             GGCGGGTTCTCAGCATACCGGCGGCGTTCGCGAAGGGTTTCGCGGATGGCATCTTTGATG
 
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rJMFF006C04-          AAATTTGGAGAGAGTTTTTGTGTGGACTTGGAGATGGTCTTTGTAGTGTGGAGT      
JMFN019O04+           AAATTTG                                                     
JMFF006C04+           AAATTTGGAGAGAGTTTTTGTGTGGACTTGGAGATGGTCTTTGTAGTGTGGAGT      
JMFN034O24+           AAATTTGGAGAGAGTTTTTGTGTGGACTTGGAGATGGTCTTTGTAGTGTGGAGTGATGAA
                      ____________________________________________________________
consensus             AAATTTGGAGAGAGTTTTTGTGTGGACTTGGAGATGGTCTTTGTAGTGTGGAGTGATGAA