Contig 008950:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN031N08Sequence453008950 (3)ref|XP_009616234.1|2e-16PREDICTED: aluminum-activated malate transporter 9 [Nicotiana tomentosiformis]
JMSF008D02Sequence306011913 (2)758008950 (3)ref|XP_009616234.1|2e-28PREDICTED: aluminum-activated malate transporter 9 [Nicotiana tomentosiformis]
JMSF018H12Sequence504011913 (2)ref|XP_009764790.1|3e-54PREDICTED: aluminum-activated malate transporter 9 [Nicotiana sylvestris]755008950 (3)ref|XP_009616234.1|1e-26PREDICTED: aluminum-activated malate transporter 9 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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rJMSF018H12+                                                            AGCAGCAGAA
rJMSF008D02+                                              GAGGAAGTGCATGNAGCAGCAGAA
                      ____________________________________________________________
consensus                                                 GAGGAAGTGCATGNAGCAGCAGAA
 
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rJMSF018H12+          GAGTTGCAAAAGAAGGTAGACAAGAAATCTTACCTTCTTGTCAATGCTGAAAGCTGGGAA
rJMSF008D02+          GAGTTGCAAAAGAAGGTAGACAAGAAATCTTACCTTCTTGTCAATGCTGAAAGCTGGGAA
                      ____________________________________________________________
consensus             GAGTTGCAAAAGAAGGTAGACAAGAAATCTTACCTTCTTGTCAATGCTGAAAGCTGGGAA
 
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rJMSF018H12+          ATTGGTGGGAGGCAACATGCCCAATTCAATGTCCCACAAGAAGTTTTGGCCTTCGACGAT
rJMSF008D02+          ATTGGTGGGAGGCAACATGCCCAATTCAATGTCCCACAAGAAGTTTTGGCCTTCGACGAT
                      ____________________________________________________________
consensus             ATTGGTGGGAGGCAACATGCCCAATTCAATGTCCCACAAGAAGTTTTGGCCTTCGACGAT
 
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rJMSF018H12+          GACACTGACACCACCACCACCACTGACTATCATTTCAAGTCCCTCAGTGAGGCCAAACTC
rJMSF008D02+          GACACTGACACCACCACCACCACTGACTATCATTTCAAGTCCCTCAGTGAGGCCAAACTC
                      ____________________________________________________________
consensus             GACACTGACACCACCACCACCACTGACTATCATTTCAAGTCCCTCAGTGAGGCCAAACTC
 
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rJMSF018H12+          GATTTATCCTCCATTCAAATGCCAAGGAGGTGGGATAATGATGGAAACTCTAGTCACAAT
rJMSF008D02+          GATTTATCCTCCATTCAAATGCCAAGGAGGTGGGATAATGATGGAAACTCTAGTCACAAT
                      ____________________________________________________________
consensus             GATTTATCCTCCATTCAAATGCCAAGGAGGTGGGATAATGATGGAAACTCTAGTCACAAT
 
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rJMSF018H12+          GCATTAGCAGGAGTCACATCCGAGAACCACGAAACAGCCCCTATGGAACCCGAAGAAGAA
rJMSF008D02+          GCATTAGCAGGAGTCACATCCGAGAACCACGAAACAGCCCCTATGGAACCCGAAGAAGAA
                      ____________________________________________________________
consensus             GCATTAGCAGGAGTCACATCCGAGAACCACGAAACAGCCCCTATGGAACCCGAAGAAGAA
 
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rJMSF018H12+          GAAGAAGAATCAAGGACATACGAAAATGCCAGTGCCTTATCCTTGGCAACATTCACCTCA
rJMSF008D02+          GAAGAAGAATCAAGGACATACGAAAATGCCAGTGCCTTATCCTTGGCAACATTCACCTCA
JMFN031N08-                                                 ATCCTTGGCAACATTCACCTCA
                      ____________________________________________________________
consensus             GAAGAAGAATCAAGGACATACGAAAATGCCAGTGCCTTATCCTTGGCAACATTCACCTCA
 
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rJMSF018H12+          CTACTCGTCGAATTTGTTGCAAGACTCCAGAACCTTGTTGACGCATTCCAAGAGCTAAGT
rJMSF008D02+          CTACTCGTCGAATTTGTTGCAAGACTCCAGAACCTTGTTGACGCATTCCAAGAGCTAAGT
JMFN031N08-           CTACTCGTCGAATTTGTTGCAAGACTCCAGAACCTTGTTGACGCATTCCAAGAGCTAAGT
                      ____________________________________________________________
consensus             CTACTCGTCGAATTTGTTGCAAGACTCCAGAACCTTGTTGACGCATTCCAAGAGCTAAGT
 
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rJMSF018H12+          GAAAAAGGCAAGTTTAATGAACCCGTCGAATTACCAGACAAAGATGAGGCAATTGGGTTA
rJMSF008D02+          GAAAAAGGCAAGTTTAATGAACCCGTCGAATTACCAGACAAAGATGAGGCAATTGGGTTA
JMFN031N08-           AAAAAAGGCAAGTTTAATGAACCCGTCGAATTACCAGACAAAGATAAGGCAATTGGGTTA
                      ____________________________________________________________
consensus             GAAAAAGGCAAGTTTAATGAACCCGTCGAATTACCAGACAAAGATGAGGCAATTGGGTTA
 
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rJMSF018H12+          TGGTCCAGGTTGACGCGGTATGTGAAGTTGTGGAGGAAAGATGACAACTTACTAGCTGGA
rJMSF008D02+          TGGTCCAGGTTGACGCGGTATGTGAAGTTGTGGAGGAAAGATGACAACTTACTAGCTGGA
JMFN031N08-           TGGTCCAGGTTGACGCGGTATGTGAAGTTGTGGAGGAAAGATGACAACTTACTAGCTGGA
                      ____________________________________________________________
consensus             TGGTCCAGGTTGACGCGGTATGTGAAGTTGTGGAGGAAAGATGACAACTTACTAGCTGGA
 
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rJMSF018H12+          GAGAATGCAGTTCGATTGGTGTAGAAGACCATGCTAAGCTATAACTTTGAACACTCATAT
rJMSF008D02+          GAGAATGCAGTTCGATTGGTGTAGAAGACCATGCTAAGCTATAACTTTGAACACTCATAT
JMFN031N08-           GAGAATGCAGTTCGATTGGTGTAGAAGACCATGCTAAGCTATAACTTTGAACACTCATAT
                      ____________________________________________________________
consensus             GAGAATGCAGTTCGATTGGTGTAGAAGACCATGCTAAGCTATAACTTTGAACACTCATAT
 
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rJMSF018H12+          TGGGTGTTTGGCTTTATGGGGATCTTACTCTTAAGCTGTGGAAGTTCTCCACAAGAAGCC
rJMSF008D02+          TGGGTGTTTGGCTTTATGGGGATCTTACTCTTAAGCTGTGGAAGTTCTCCACAAGAAGCC
JMFN031N08-           TGGGTGTTTGGCTTTATGGGGATCTTACTCTTAAGCTGTGGAAGTTCTCCACAAGAAGCC
                      ____________________________________________________________
consensus             TGGGTGTTTGGCTTTATGGGGATCTTACTCTTAAGCTGTGGAAGTTCTCCACAAGAAGCC
 
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rJMSF018H12+          CTTTTTGCAAGAACACCTGCTTAACATTGCTAGAGTAGTAGA                  
rJMSF008D02+          CTTTTTGCAAGAACACCTGCTTAACATTGCTAGAGTAGTAGA                  
JMFN031N08-           CTTTTTGCAAGAACACCTGCTTAACATTGCTAGAGTAGTAGACAAGATTTTACATGTTTA
                      ____________________________________________________________
consensus             CTTTTTGCAAGAACACCTGCTTAACATTGCTAGAGTAGTAGACAAGATTTTACATGTTTA
 
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JMFN031N08-           CTAACATATTTAGTGGTCTCACGTGTTAAGTACTACTATATATATGGCAATTTAATTTTA
                      ____________________________________________________________
consensus             CTAACATATTTAGTGGTCTCACGTGTTAAGTACTACTATATATATGGCAATTTAATTTTA