| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF007I18 | Sequence | 575 | 004629 (11) | ref|XP_009608928.1| | 8e-72 | PREDICTED: peroxisomal fatty acid beta-oxidation multifunctional protein AIM1 [ | 776 | 008948 (10) | ref|XP_009766308.1| | 8e-89 | PREDICTED: peroxisomal fatty acid beta-oxidation multifunctional protein AIM1-l |
| JMFF012H03 | Sequence | 568 | 004629 (11) | ref|XP_009608928.1| | 2e-70 | PREDICTED: peroxisomal fatty acid beta-oxidation multifunctional protein AIM1 [ | 776 | 008948 (10) | ref|XP_009766308.1| | 9e-101 | PREDICTED: peroxisomal fatty acid beta-oxidation multifunctional protein AIM1-l |
| JMFF042G21 | Sequence | 659 | 004629 (11) | ref|XP_009608928.1| | 3e-86 | PREDICTED: peroxisomal fatty acid beta-oxidation multifunctional protein AIM1 [ | 496 | 008948 (10) | ref|XP_009766308.1| | 1e-45 | PREDICTED: peroxisomal fatty acid beta-oxidation multifunctional protein AIM1-l |
| JMFN030H19 | Sequence | 632 | 008948 (10) | ref|XP_006352155.1| | 3e-115 | PREDICTED: peroxisomal fatty acid beta-oxidation multifunctional protein AIM1-l | |||||
| JMFN030J08 | Sequence | 493 | 008948 (10) | ref|XP_009766308.1| | 4e-43 | PREDICTED: peroxisomal fatty acid beta-oxidation multifunctional protein AIM1-l | |||||
| JMFS096D11 | Sequence | 554 | 008948 (10) | ref|XP_009608928.1| | 7e-94 | PREDICTED: peroxisomal fatty acid beta-oxidation multifunctional protein AIM1 [ | |||||
| JMSF004M10 | Sequence | 314 | 007407 (31) | ref|XP_011092178.1| | 8e-19 | PREDICTED: chloroplast stem-loop binding protein of 41 kDa b, chloroplastic [Se | 145 | 008948 (10) | |||
| JMSF016D14 | Sequence | 386 | 004629 (11) | ref|XP_004139346.1| | 4e-48 | PREDICTED: peroxisomal fatty acid beta-oxidation multifunctional protein AIM1-l | 727 | 008948 (10) | gb|AFS41246.1| | 1e-74 | cinnamoyl-CoA hydratase-dehydrogenase [Petunia x hybrida] |
| JMSF037H15 | Sequence | 647 | 004629 (11) | ref|XP_009608928.1| | 8e-84 | PREDICTED: peroxisomal fatty acid beta-oxidation multifunctional protein AIM1 [ | 701 | 008948 (10) | gb|AFS41246.1| | 3e-79 | cinnamoyl-CoA hydratase-dehydrogenase [Petunia x hybrida] |
| JMSF049F23 | Sequence | 643 | 004629 (11) | ref|XP_009608928.1| | 7e-84 | PREDICTED: peroxisomal fatty acid beta-oxidation multifunctional protein AIM1 [ | 690 | 008948 (10) | gb|AFS41246.1| | 4e-74 | cinnamoyl-CoA hydratase-dehydrogenase [Petunia x hybrida] |
This contig is upended
. : . : . : . : . : . :
JMFS096D11- AAGAAAGTTGGTTTGAGGCC
____________________________________________________________
consensus AAGAAAGTTGGTTTGAGGCC
. : . : . : . : . : . :
JMFS096D11- TATATCAGTGATGCTAGGCACCTTAGATGTAGGCCTCAAACCAACATCAATAAAGAAAGT
____________________________________________________________
consensus TATATCAGTGATGCTAGGCACCTTAGATGTAGGCCTCAAACCAACATCAATAAAGAAAGT
. : . : . : . : . : . :
JMFS096D11- TGCTGTTATTGGTGGGGGTTTAATGGGTTCTGGTATAGCTACAGCTCTTCTTCTGAGCAA
____________________________________________________________
consensus TGCTGTTATTGGTGGGGGTTTAATGGGTTCTGGTATAGCTACAGCTCTTCTTCTGAGCAA
. : . : . : . : . : . :
JMFS096D11- TATAACTGTTGTTCTTAAGGAAATTAACCCTGAATACCTTAGCAAGGGATTAAAAACCAT
____________________________________________________________
consensus TATAACTGTTGTTCTTAAGGAAATTAACCCTGAATACCTTAGCAAGGGATTAAAAACCAT
. : . : . : . : . : . :
JMFS096D11- TGAAGGAAATGTTCGTGGTTTGGTGTCAAGGAAGAAGTTGGCTCAAGACAAAGCTGAAAA
JMFN030H19- GACAAAGCTGAAAA
____________________________________________________________
consensus TGAAGGAAATGTTCGTGGTTTGGTGTCAAGGAAGAAGTTGGCTCAAGACAAAGCTGAAAA
. : . : . : . : . : . :
JMFS096D11- GTCTCTGTCAATTCTTAAAGGTGCACTGGATTACTCAGAATTTAGGGATGTGGATATGGT
JMFN030H19- GTCTCTGTCAATTCTTAAAGGTGCACTGGATTACTCACAATTTAGGGATGTGGATATGGT
____________________________________________________________
consensus GTCTCTGTCAATTCTTAAAGGTGCACTGGATTACTCAGAATTTAGGGATGTGGATATGGT
. : . : . : . : . : . :
JMFS096D11- TATAGAGGCTGTGATTGAAAATGTTCCACTGAAACAAAAGATATTCAGTGACATTGAGAA
JMFN030H19- TATAGAGGCTGTGATTGAAAATGTTCCACTGAAACAAAAGATATTCAGTGACATTGAGAA
____________________________________________________________
consensus TATAGAGGCTGTGATTGAAAATGTTCCACTGAAACAAAAGATATTCAGTGACATTGAGAA
. : . : . : . : . : . :
JMFS096D11- GGCATGTCCTTCACATTGTATTTTGGCAACCAACACATCAACTATAGACCTCAACATAAT
JMFN030H19- GGCATGTCCTTCACATTGTATTTTGGCAACCAACACATCAACTATAGACCTCAACATAAT
____________________________________________________________
consensus GGCATGTCCTTCACATTGTATTTTGGCAACCAACACATCAACTATAGACCTCAACATAAT
. : . : . : . : . : . :
JMFS096D11- TGGCCAGCAGACCAGATCTCAAGATCGGATTATAGGGGCCCACTTTTTTAGTCCTGCTCA
JMFN030H19- TGGCCAGCAGACCAGATCTCAAGATCGGATTATAGGGGCCCACTTTTTTAGTCCTGCTCA
____________________________________________________________
consensus TGGCCAGCAGACCAGATCTCAAGATCGGATTATAGGGGCCCACTTTTTTAGTCCTGCTCA
. : . : . : . : . : . :
JMFS096D11- TGTGATGCCTCTTTTGGAGATCGTACGGACAGAGAAGACTTCAGCTCAAACAAT
JMFN030H19- TGTGATGCCTCTTTTGGAGATCGTACGGACAGAGAAGACTTCAGCTCAAACAATTCTTGA
____________________________________________________________
consensus TGTGATGCCTCTTTTGGAGATCGTACGGACAGAGAAGACTTCAGCTCAAACAATTCTTGA
. : . : . : . : . : . :
JMFN030H19- CCTTATTACAGTTGGGAAAGCAATAAAAAAAGTACCAGTTGTTGTTGGTAATTGTACTGG
____________________________________________________________
consensus CCTTATTACAGTTGGGAAAGCAATAAAAAAAGTACCAGTTGTTGTTGGTAATTGTACTGG
. : . : . : . : . : . :
JMFN030H19- CTTTGCTGACAATAGGACCTTCTTTCCATACTCACAGGGAGCACATTTCCTGGTCAACCT
rJMFF012H03+ T
____________________________________________________________
consensus CTTTGCTGACAATAGGACCTTCTTTCCATACTCACAGGGAGCACATTTCCTGGTCAACCT
. : . : . : . : . : . :
JMFN030H19- GGGAGTGGATGTTTTCAGGATTGACAAGCTAATTGCAGATTTTGGTCTCCCTATGGGCCC
rJMFF012H03+ GGGAGTGGATGTTTTCAGGATTGACAAGCTAATTGCAGATTTTGGTCTCCCTATGGGCCC
____________________________________________________________
consensus GGGAGTGGATGTTTTCAGGATTGACAAGCTAATTGCAGATTTTGGTCTCCCTATGGGCCC
. : . : . : . : . : . :
JMFN030H19- ATTCCAGCATTCAGATTTATCAGGATATGGTGTTGCTGTTGCAGTACGAATAGAATTTGC
rJMFF012H03+ ATTCCAGCTTCAAGATTTATCAGGATATGGTGTTGCTGTTGCAGTAGGAAAAGAATTTGC
rJMSF037H15+ CAGTAGGAAAAGAATTTGC
rJMSF016D14+ TTATCAGGATATGGTGTTGCTGTTGCAGTAGGAAAAGAATTTGC
rJMFF007I18+ AGATTTATCAGGATATGGTGTTGCTGTTGCAGTAGGAAAAGAATTTGC
____________________________________________________________
consensus ATTCCAGCTTTCAGATTTATCAGGATATGGTGTTGCTGTTGCAGTAGGAAAAGAATTTGC
. : . : . : . : . : . :
JMFN030H19- -TTCTGCTTTTGCAGACCGTACATATCAGTCTCCTTTGCTTGACCTCCTTATTA
rJMFF012H03+ -TTCTGCTTTTGCAGACCGTACATATCAGTCTCCTTTGCTTGACCTCCTTATTAAAAGTG
rJMSF037H15+ -TTCTGCTTTTGCAGACCGTACATATCAGTCTCCTTTGCTTGACCTCCTTATTAAAAGTG
rJMSF016D14+ TTTCTGCTTNTGCAGACCGTACATATCAGTCTCCTTTGCTTGACCTCCTTATTAAAAGTG
rJMSF049F23+ TTTTGCAGACCGTACATATCAGTCTCCTTTGCTTGACCTCCTTATTAAAAGTG
rJMFF007I18+ -TTCTGCTTTTGCAGACCGTACATATCAGTCTCCTTTGCTTGACCTCCTTATTAAAAGTG
____________________________________________________________
consensus -TTCTGCTTTTGCAGACCGTACATATCAGTCTCCTTTGCTTGACCTCCTTATTAAAAGTG
. : . : . : . : . : . :
rJMFF012H03+ GACGGAATGGTAAAAATAATGGAAAAGGATACTACATTTACGAGAAGGGAAGTAAACCAA
rJMSF037H15+ GACGGAATGGTAAAAATAATGGAAAAGGATACTACATTTACGAGAAGGGAAGTAAACCAA
rJMSF016D14+ GACGGAATGGTAAAAATAATGGAAAAGGATACTACATTTACGAGAAGGGAAGTAAACCAA
rJMSF049F23+ GACGGAATGGTAAAAATAATGGAAAAGGATACTACATTTACGAGAAGGGAAGTAAACCAA
rJMFF007I18+ GACGGAATGGTAAAAATAATGGAAAAGGATACTACATTTACGAGAAGGGAAGTAAACCAA
____________________________________________________________
consensus GACGGAATGGTAAAAATAATGGAAAAGGATACTACATTTACGAGAAGGGAAGTAAACCAA
. : . : . : . : . : . :
rJMFF012H03+ AACCTGATCCTTCAGTACTTCCACTTGTAGAGCAGTCTAGAAGGCTCACTAACATTATGC
rJMSF037H15+ AACCTGATCCTTCAGTACTTCCACTTGTAGAGCAGTCTAGAAGGCTCACTAACATTATGC
rJMSF016D14+ AACCTGATCCTTCAGTACTTCCACTTGTAGAGCAGTCTAGAAGGCTCACTAACATTATGC
rJMSF049F23+ AACCTGATCCTTCAGTACTTCCACTTGTAGAGCAGTCTAGAAGGCTCACTAACATTATGC
rJMFF007I18+ AACCTGATCCTTCAGTACTTCCACTTGTAGAGCAGTCTAGAAGGCTCACTAACATTATGC
____________________________________________________________
consensus AACCTGATCCTTCAGTACTTCCACTTGTAGAGCAGTCTAGAAGGCTCACTAACATTATGC
. : . : . : . : . : . :
rJMFF012H03+ CTGGAGGGAAGCCGATATCTGTCACCGACCAAGAAATTGTCGAGATGATACTGTTTCCTG
rJMSF037H15+ CTGGAGGGAAGCCGATATCTGTCACCGACCAAGAAATTGTCGAGATGATACTGTTTCCTG
rJMSF016D14+ CTGGAGGGAAGCCGATATCTGTCACCGACCAAGAAATTGTCGAGATGATACTGTTTCCTG
rJMSF049F23+ CTGGAGGGAAGCCGATATCTGTCACCGACCAAGAAATTGTCGAGATGATACTGTTTCCTG
rJMFF042G21+ AAATTGTCGAGATGATACTGTTTCCTG
rJMFF007I18+ CTGGAGGGAAGCCGATATCTGTCACCGACCAAGAAATTGTCGAGATGATACTGTTTCCTG
JMFN030J08- GATACTGTTTCCTG
____________________________________________________________
consensus CTGGAGGGAAGCCGATATCTGTCACCGACCAAGAAATTGTCGAGATGATACTGTTTCCTG
. : . : . : . : . : . :
rJMFF012H03+ TTGTTAATGAGGCATGTCGAGTCTTGGATGAAGGGATAGTTGTTCGAGCATCAGATCTTG
rJMSF037H15+ TTGTTAATGAGGCATGTCGAGTCTTGGATGAAGGGATAGTTGTTCGAGCATCAGATCTTG
rJMSF016D14+ TTGTTAATGAGGCATGTCGAGTCTTGGATGAAGGGATAGTTGTTCGAGCATCAGATCTTG
rJMSF049F23+ TTGTTAATGAGGCATGTCGAGTCTTGGATGAAGGGATAGTTGTTCGAGCATCAGATCTTG
rJMFF042G21+ TTGTTAATGAGGCATGTCGAGTCTTGGATGAAGGGATAGTTGTTCGAGCATCAGATCTTG
rJMFF007I18+ TTGTTAATGAGGCATGTCGAGTCTTGGATGAAGGGATAGTTGTTCGAGCATCAGATCTTG
JMFN030J08- TTGTTAATGAGGCATGTCGAGTCTTGGATGAAGGGATAGTTGTTCGAGCATCAGATCTTG
____________________________________________________________
consensus TTGTTAATGAGGCATGTCGAGTCTTGGATGAAGGGATAGTTGTTCGAGCATCAGATCTTG
. : . : . : . : . : . :
rJMFF012H03+ ATGTTGCTTCTCTTCTTGGAATGAGTTTCCCATCTTACCGTGGCGGAATTGTTTACTGGG
rJMSF037H15+ ATGTTGCTTCTCTTCTTGGAATGAGTTTCCCATCTTACCGTGGCGGAATTGTTTACTGGG
rJMSF016D14+ ATGTTGCTTCTCTTCTTGGAATGAGTTTCCCATCTTACCGTGGCGGAATTGTTTACTGGG
rJMSF049F23+ ATGTTGCTTCTCTTCTTGGAATGAGTTTCCCATCTTACCGTGGCGGAATTGTTTACTGGG
rJMFF042G21+ ATGTTGCTTCTCTTCTTGGAATGAGTTTCCCATCTTACCGTGGCGGAATTGTTTACTGGG
rJMFF007I18+ ATGTTGCTTCTCTTCTTGGAATGAGTTTCCCATCTTACCGTGGCGGAATTGTTTACTGGG
JMFN030J08- ATGTTGCTTCTCTTCTTGGAATGAGTTTCCCATCTTACCGTGGCGGAATTGTTTACTGGG
____________________________________________________________
consensus ATGTTGCTTCTCTTCTTGGAATGAGTTTCCCATCTTACCGTGGCGGAATTGTTTACTGGG
. : . : . : . : . : . :
rJMFF012H03+ CAGACACTGTTGGTGCCATGCACATATACACGAGCCTCAAGAAGTGGTCAGAATTGTACG
rJMSF037H15+ CAGACACTGTTGGTGCCATGCACATATACACGAGCCTCAAGAAGTGGTCAGAATTGTACG
rJMSF016D14+ CAGACACTGTTGGTGCCATGCACATATACACGAGCCTCAAGAAGTGGTCAGAATTGTACG
rJMSF049F23+ CAGACACTGTTGGTGCCATGCACATATACACGAGCCTCAAGAAGTGGTCAGAATTGTACG
rJMFF042G21+ CAGACACTGTTGGTGCCATGCACATATACACGAGCCTCAAGAAGTGGTCAGAATTGTACG
rJMFF007I18+ CAGACACTGTTGGTGCCATGCACATATACACGAGCCTCAAGAAGTGGTCAGAATTGTACG
JMFN030J08- CAGACACTGTTGGTGCCATGCACATATACACGAGCCTCAAGAAGTGGTCAGAATTGTACG
____________________________________________________________
consensus CAGACACTGTTGGTGCCATGCACATATACACGAGCCTCAAGAAGTGGTCAGAATTGTACG
. : . : . : . : . : . :
rJMFF012H03+ GTATTGGGAACTTCTTCAAGCCGTCGAGATTCTTAGAAGAGAGAGCACTGAAAGGCATCC
rJMSF037H15+ GTATTGGGAACTTCTTCAAGCCGTCGAGATTCTTAGAAGAGAGAGCACTGAAAGGCATCC
rJMSF016D14+ GTATTGGGAACTTCTTCAAGCCGTCGAGATTCTTAGAAGAGAGAGCACTGAAAGGCATCC
rJMSF049F23+ GTATTGGGAACTTCTTCAAGCCGTCGAGATTCTTAGAAGAGAGAGCACTGAAAGGCATCC
rJMFF042G21+ GTATTGGGAACTTCTTCAAGCCGTCGAGATTCTTAGAAGAGAGAGCACTGAAAGGCATCC
rJMFF007I18+ GTATTGGGAACTTCTTCAAGCCGTCGAGATTCTTAGAAGAGAGAGCACTGAAAGGCATCC
JMFN030J08- GTATTGGGAACTTCTTCAAGCCGTCGAGATTCTTAGAAGAGAGAGCACTGAAAGGCATCC
____________________________________________________________
consensus GTATTGGGAACTTCTTCAAGCCGTCGAGATTCTTAGAAGAGAGAGCACTGAAAGGCATCC
. : . : . : . : . : . :
rJMFF012H03+ GATTGAGTGCACCTGCTTCGACGTCTTCAGCTACAAGATCGCGTATCTAAGACAC-TGTT
rJMSF037H15+ GATTGAGTGCACCTGCTTCGACGTCTTCAGCTACAAGATCGCGTATCTAAGACAC-TGTT
rJMSF004M10+ CAAGATCGCGTATCTAAGACACNTGTT
rJMSF016D14+ GATTGAGTGCACCTGCTTCGACGTCTTCAGCTACAAGATCGCGTATCTAAGACAC-TGTT
rJMSF049F23+ GATTGAGTGCACCTGCTTCGACGTCTTCAGCTACAAGATCGCGTATCTAAGACAC-TGTT
rJMFF042G21+ GATTGAGTGCACCTGCTTCGACGTCTTCAGCTACAAGATCGCGTATTTAAGACAC-TGTT
rJMFF007I18+ GATTGAGTGCACCTGCTTCGACGTCTTCAGCTACAAGATCGCGTATCTAAGACAC-TGTT
JMFN030J08- GATTGAGTGCACCTGCTTCGACGTCTTCAGCTACAAGATCGCGTATCTAAGACAC-TGTT
____________________________________________________________
consensus GATTGAGTGCACCTGCTTCGACGTCTTCAGCTACAAGATCGCGTATCTAAGACAC-TGTT
. : . : . : . : . : . :
rJMFF012H03+ TGGCTGACGATCCAACCTTCGAATATGCCCAGATGGAAATAAATCCCATATGCTGCCCAA
rJMSF037H15+ TGGCTGACGATCCAACCTTCGAATATGCCCAGATGGAAATAAATCCCATATGCTGCCCAA
rJMSF004M10+ TGGCTGACGATCCAACCTTCGAATATGCCCGGATGGAAATAAATCCCATATGCTGCCCAA
rJMSF016D14+ TGGCTGACGATCCAACCTTCGAATATGCCCAGATGGAAATAAATCCCATATGCTGCCCAA
rJMSF049F23+ TGGCTGACGATCCAACCTTCGAATATGCCCAGATGGAAATAAATCCCATATGCTGCCCAA
rJMFF042G21+ TGGCTGACGATCCAACCTTCGAATATGCCCAGATGGAAATAAATCCCATATGCTGCCCAA
rJMFF007I18+ TGGCTGACGATCCAACCTTCGAATATGCCCAGATGGAAATAAATCCCATATGCTGCCCAA
JMFN030J08- TGGCTGACGATCCAACCTTCGAATATGCCCAGATGGAAATAAATCCCATATGCTGCCCAA
____________________________________________________________
consensus TGGCTGACGATCCAACCTTCGAATATGCCCAGATGGAAATAAATCCCATATGCTGCCCAA
. : . : . : . : . : . :
rJMFF012H03+ TAAATGTATGCATAATAGAATTGTTCATTTGTTTTTATATTTTACAAGTTTCAAAAT
rJMSF037H15+ TAAATGTATGCATAATAGAATTGTTCATTTGTTTTTATATTTTACAAGTTTCAAAATTGT
rJMSF004M10+ TAAATGTATGCATAATAGAATTGCTCATTTGTTTTCATATTTTACAAGTTTCAAAATT
rJMSF016D14+ TAAATGTATGCATAATAGAATTGTTCATTTGTTTTTATATTTTACAAGTTTCAAAATTGT
rJMSF049F23+ TAAATGTATGCATAATAGAATTGTTCATTTGTTTTTATATTTTACAAGTTTCAAAATTGT
rJMFF042G21+ TAAATGTATGCATAATAGAATTGTTCATTTGTTTTTATATTTTACAAGTTTCAAAATTGT
rJMFF007I18+ TAAATGTATGCATAATAGAATTGTTCATTTGTTTTTATATTTTACAAGTTTCAAAATTGT
JMFN030J08- TAAATGTATGCATAATAGAATTGTTCATTTGTTTTTATATTTTACAAGTTTCAAAATTGT
____________________________________________________________
consensus TAAATGTATGCATAATAGAATTGTTCATTTGTTTTTATATTTTACAAGTTTCAAAATTGT
. : . : . : . : . : . :
rJMSF037H15+ GATTTAGAGGTATCTTT
rJMSF016D14+ GATCTAGAGGTATCTTT
rJMSF049F23+ GATTTAGAGGTATCTTTTCCCTTGCCTAATAAGAGTCA
rJMFF042G21+ GATTTAGAGGTATCTTTTCCCTTGCCTAATAAGAGTCATGGAATGACATT
rJMFF007I18+ GATTTAGAGGTATCTTTTCCCTTGCCTAATAAGAGTCATGGAATGACATTCTAATTCAA
JMFN030J08- GATTTAGAGGTATCTTTTCCCTTGCCTAATAAGAGTCATGGAATGACATTCTAATTCAAT
____________________________________________________________
consensus GATTTAGAGGTATCTTTTCCCTTGCCTAATAAGAGTCATGGAATGACATTCTAATTCAAT