Contig 008947:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFN044A23-                                ACTAGTCTCGAGXXXXXXXXXXXXXXXXXXXXXXXXXXX
                      ____________________________________________________________
consensus                                  ACTAGTCTCGAGNNNNNNNNNNNNNNNNNNNNNNNNNNN
 
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JMFN044A23-           ACAAAGAAAAATTTCTTTTCTGTTTCTTTTGTTTCCCAATAACAATGTTGACATTCACAC
                      ____________________________________________________________
consensus             ACAAAGAAAAATTTCTTTTCTGTTTCTTTTGTTTCCCAATAACAATGTTGACATTCACAC
 
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JMFN044A23-           TATATATTTATATAGCTGGGGCCACTTAAAACAGGAACTTACAATATCATCTAGTACAGT
JMFN037G23+                                                               AGTACAGT
                      ____________________________________________________________
consensus             TATATATTTATATAGCTGGGGCCACTTAAAACAGGAACTTACAATATCATCTAGTACAGT
 
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JMFN044A23-           TCCTATGATACTTTCATAATTTAAGGCAAGCACGTACAACATGTAGAGCAATGACTAAGG
JMFN037G23+           TCCTATGATACTTTCATAATNTAAGGCAAGCACGTACAACATGTAGAGCAATGACTAAGG
                      ____________________________________________________________
consensus             TCCTATGATACTTTCATAATTTAAGGCAAGCACGTACAACATGTAGAGCAATGACTAAGG
 
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JMFN044A23-           CTCCAATGGATATGATGCTTTGATGAATGGATTGGAAATCTGGTTATGTAGGGACAATAA
JMFN037G23+           CTCCAATGGATATGATGCTTTGATGAATGGATTGGAAATCTGGTTATGTAGGGACAATAA
                      ____________________________________________________________
consensus             CTCCAATGGATATGATGCTTTGATGAATGGATTGGAAATCTGGTTATGTAGGGACAATAA
 
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JMFN044A23-           ATATAATTGAAAAAGGAGGGAGTGGATATATATATATAAATATATATTTGTGGTGATGGA
JMFN037G23+           ATATAATTGAAAAAGGAGGGAGTGGATATATATATATAAATATATATTTGTGGTGATGGA
JMFS108E10+                                     TATATATATATAAATATATATNTGTGGTGATGGA
                      ____________________________________________________________
consensus             ATATAATTGAAAAAGGAGGGAGTGGATATATATATATAAATATATATTTGTGGTGATGGA
 
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JMFN044A23-           CAACGCTTCTGCGCCTGCATCTGCAATAACATTAGCTTGGCTGGGTAAAAGCAGGCCGAG
JMFN037G23+           CAACGCTTCTGCGCCTGCATCTGCAATAGCATTAGCTTGGCTGGGTAGAAGCAGGCCGAG
JMFS108E10+           CAACGCTTCTGCGCCTGCATCTGCAATAGCATTAGCTTGGCTGGGTAGAAGCAGGCCGAG
JMFN029J21+                                                      GGTAGAAGCAGGCCGAG
                      ____________________________________________________________
consensus             CAACGCTTCTGCGCCTGCATCTGCAATAGCATTAGCTTGGCTGGGTAGAAGCAGGCCGAG
 
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JMFN044A23-           GTTGCACAACATCTTGAGATGGATCGGAGGCGTGAAAATTGTAGCAAACTTTTTTTGGCT
JMFN037G23+           GTTGCACAACATCTTGAGATGGATCGGAGGCGTGAAAATTGTAGCAGACTTTTTTTGGCT
JMFS108E10+           GTTGCACAACATCTTGAGATGGATCGGAGGCGTGAAAATTGTAGCAGACTTTTTTTGGCT
JMFN029J21+           GTTGCACAACATCTTGAGATGGATCGGAGGCGTGAAAATTGTAGCAGACTTTTTTTGGCT
                      ____________________________________________________________
consensus             GTTGCACAACATCTTGAGATGGATCGGAGGCGTGAAAATTGTAGCAGACTTTTTTTGGCT
 
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JMFN044A23-           CAACAGCCAATGGATGTGATATGGGTATGGATAGTGGGTTTTAGTAAAAATGGAAATTTG
JMFN037G23+           CAACAGCCAATGGATGTGATATGGGTATGGATAGTGGGTTTTAGTAAAAATGGAAATTTG
JMFS108E10+           CAACAGCCAATGGATGTGATATGGGTATGGATAGTGGGTTTTAGTAAAAATGGAAATTTG
JMFN029J21+           CAACAGCCAATGGATGTGATATGGGTATGGATAGTGGGTTTTAGTAAAAATGGAAATTTG
                      ____________________________________________________________
consensus             CAACAGCCAATGGATGTGATATGGGTATGGATAGTGGGTTTTAGTAAAAATGGAAATTTG
 
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JMFN044A23-           AAGAGAAAAGAGAGAGAGAAGGAAGAAGATCATTTTTTTCTTTTTCTATTTGGGNGAAAA
JMFN037G23+           AAGAGAAAAGAGAGAGAGAAGGAAGAAGATCATTTTTTTCTTTTTCTATTTGGGTGTAAA
JMFS156F11-                                            TTTTTTTTTTTTTTTTTTGGGTGGAAA
JMFS108E10+           AAGAGAAAAGAGAGAGAGAAGGAAGAAGATCATTTTTTTCTTTTTCTATTTGGGTGTAAA
JMFN029J21+           AAGAGAAAAGAGAGAGAGAAGGAAGAAGATCATTTTTTTCTTTTTCTATTTGGGTGTAAA
                      ____________________________________________________________
consensus             AAGAGAAAAGAGAGAGAGAAGGAAGAAGATCATTTTTTTCTTTTTCTATTTGGGTGTAAA
 
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JMFN044A23-           TGAGGGGGCCGGGGGC                                            
JMFN037G23+           TGAGGGGGCCGGGGGCCGAGGGTGCTAGCATGCGCGGCCCTGGCGGCAAGCAAGTGGACC
JMFS156F11-           AGAGGGGGCCGGGGGCCGAGGGTGCTAGCATGCGCGGCCCTGGCGGCAAGCAAGTGGACC
JMFS108E10+           TGAGGGGGCCGGGGGCCGAGGGTGCTAGCATGCGCGGCCCTGGCGGCAAGCAAGTGGACC
JMFN029J21+           TGAGGGGGCCGGGGGCCGAGGGTGCTAGCATGCGCGGCCCTGGCGGCAAGCAAGTGGACC
                      ____________________________________________________________
consensus             TGAGGGGGCCGGGGGCCGAGGGTGCTAGCATGCGCGGCCCTGGCGGCAAGCAAGTGGACC
 
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JMFN037G23+           AGCAGTTGCAGTAATTGCGCCGACCAAAGAAGAGGACTTGGCACCTAAGCTTGAAGCTCT
JMFS156F11-           AGCAGTTGCAGTAATTGCGCCGACCAAAGAAGAGGACTTGGCACCTAAGCTTGAAGCTCT
JMFS108E10+           AGCAGTTGCAGTAATTGCGCCGACCAAAGAAGAGGACTTGGCACCTAAGCTTGAAGCTCT
JMFN029J21+           AGCAGTTGCAGTAATTGCGCCGACCAAAGAAGAGGACTTGGCACCTAAGCTTGAAGCTCT
                      ____________________________________________________________
consensus             AGCAGTTGCAGTAATTGCGCCGACCAAAGAAGAGGACTTGGCACCTAAGCTTGAAGCTCT
 
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JMFN037G23+           TGCATAGCTGGCTGAGGCACCGGCTCCAGATGGGGTAAAATAGGCTCCATTAAGCATCAA
JMFS156F11-           TGCATAGCTGGCTGAGGCACCGGCTCCAGATGGGGTAAAATAGGCTCCATTAAGCATCAA
JMFS108E10+           TGCATAGCTGGCTGAGGCACCGGCTCCAGATGGGGTAAAATAGGCTCCATTAAGCATCAA
JMFN029J21+           TGCATAGCTGGCTGAGGCACCGGCTCCAGATGGGGTAAAATAGGCTCCATTAAGCATCAA
                      ____________________________________________________________
consensus             TGCATAGCTGGCTGAGGCACCGGCTCCAGATGGGGTAAAATAGGCTCCATTAAGCATCAA
 
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JMFN037G23+           GTCTCC                                                      
JMFS156F11-           GTCTCCCTCTGATCTCCAGTTCCAACCTCTCCATTCACTTTGTGATGTCTCAACTCTCTT
JMFS108E10+           GTCTCCCTCTGATCTCCAGTTCCAACCTCTCCATTCACTTTGTGATGTCTCAACTCTCTT
JMFN029J21+           GTCTCCCTCTGATCTCCAGTTCCAACCTCTCCATTCACTTTGTGATGTCTCAACTCTCTT
                      ____________________________________________________________
consensus             GTCTCCCTCTGATCTCCAGTTCCAACCTCTCCATTCACTTTGTGATGTCTCAACTCTCTT
 
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JMFS156F11-           TGTCACCTCCTTGGCAAAAGGATTGACTGGA                             
JMFS108E10+           TGTCACCTCCTTGGCAAAAGGATTGACTGGAGCAAGGTATCGGTTGCCTTGACTGTTGAT
JMFN029J21+           TGTCACCTCCTTGGCAAAAGGATTGACTGGAGCAAGGTATCGGTTGCCTTGACTGTTGAT
                      ____________________________________________________________
consensus             TGTCACCTCCTTGGCAAAAGGATTGACTGGAGCAAGGTATCGGTTGCCTTGACTGTTGAT
 
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JMFS108E10+           GGTTGGGCTAGCACTTCCACCGATGGCATACATTTCCCAGTGAGTGTAGTCAT       
JMFN029J21+           GGTTGGGCTAGCACTTCCACCGATGGCATACATTTCCCAGTGAGTGTAGTCATTGTTCAC
                      ____________________________________________________________
consensus             GGTTGGGCTAGCACTTCCACCGATGGCATACATTTCCCAGTGAGTGTAGTCATTGTTCAC
 
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JMFN029J21+           CACATGGAAGTACCCATGCCTACACCTTGGCATTCTCTGAATGAGGCCCTCTCCAAAGTG
                      ____________________________________________________________
consensus             CACATGGAAGTACCCATGCCTACACCTTGGCATTCTCTGAATGAGGCCCTCTCCAAAGTG