Contig 008946:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFN035L11+                AAGAGATAGTAAGAAGCATTAATATTCAGAATGAACTTTCATGTTCAGAAAGTCG
rJMFF001I18-                                                        TGTTCAGAAAGTCG
                      ____________________________________________________________
consensus                  AAGAGATAGTAAGAAGCATTAATATTCAGAATGAACTTTCATGTTCAGAAAGTCG
 
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JMFN035L11+           CACAAGAACAAATAGGTGAAGGAAGAAAAACTTAACATCATCGCATGTACAAGGAATTCA
rJMFF001I18-          CACAAGAACAAATAGGTGAAGGAAGAAAAACTTAACATCATCGCATGTACAAGGAATTCA
                      ____________________________________________________________
consensus             CACAAGAACAAATAGGTGAAGGAAGAAAAACTTAACATCATCGCATGTACAAGGAATTCA
 
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JMFN035L11+           AGAACTTTGGTTCCACCATAATTTTACTTGAGGTCTATAGAAATGGGAATGGGGGACGAC
rJMFF001I18-          AGAACTTTGGTTCCACCATAATTTTACTTGAGGTCTATAGAAATGGGAATGGGGGACGAC
                      ____________________________________________________________
consensus             AGAACTTTGGTTCCACCATAATTTTACTTGAGGTCTATAGAAATGGGAATGGGGGACGAC
 
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JMFN035L11+           GACGGGGCTCAAGGGTTCCAAAAATCACTATTTTTTAAATTTTTTTTATTTTTAAACTAA
rJMFF001I18-          GACGGGGCTCAAGGGTTCCAAAAATCACTATTTTTTAAATTTTTTTTATTTTTAAACTAA
                      ____________________________________________________________
consensus             GACGGGGCTCAAGGGTTCCAAAAATCACTATTTTTTAAATTTTTTTTATTTTTAAACTAA
 
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JMFN035L11+           GATTTCATATGCGTTGTGTCCAATCCCCAACAGAAGGTATATATTGTCGCACTGAACAGA
rJMFF001I18-          GATTTCATATGCGTTGTGTCCAATCCCCAACAGAAGGTATATATTGTCGCACTGAACAGA
                      ____________________________________________________________
consensus             GATTTCATATGCGTTGTGTCCAATCCCCAACAGAAGGTATATATTGTCGCACTGAACAGA
 
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JMFN035L11+           ATATACCAACACAGCCGAGCCTATTGACCAGGGTTTCCTAGAAGACGCTCCACTGCAGCA
rJMFF001I18-          ATATACCAACACAGCCGAGCCTATTGACCAGGGTTTCCTAGAAGACGCTCCACTGCAGCA
                      ____________________________________________________________
consensus             ATATACCAACACAGCCGAGCCTATTGACCAGGGTTTCCTAGAAGACGCTCCACTGCAGCA
 
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JMFN035L11+           TGAACATTCCCTGCAGTAGCTATCAGAGCCCTTATGTTTTCTTGAGTATCAAAGAACCCC
rJMFF001I18-          TGAACATTCCCTGCAGTAGCTATCAGAGCCCTTATGTTTTCTTGAGTATCAAAGAACCCC
                      ____________________________________________________________
consensus             TGAACATTCCCTGCAGTAGCTATCAGAGCCCTTATGTTTTCTTGAGTATCAAAGAACCCC
 
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JMFN035L11+           ATTTCTTGTAGTTGTGCTAGCTGAGAGGCATACAATTCCTCAGGTGGAACATTAGGTCTG
rJMFF001I18-          ATTTCTTGTAGTTGTGCTAGCTGAGAGGCATACAATTCCTCAGGTGGAACATTAGGTCTG
                      ____________________________________________________________
consensus             ATTTCTTGTAGTTGTGCTAGCTGAGAGGCATACAATTCCTCAGGTGGAACATTAGGTCTG
 
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JMFN035L11+           TTGGGTACACCCAAGCCACCTGTCCCGAGTCCACCAAACATATTCATCAGCATATCT   
rJMFF001I18-          TTGGGTACACCCAAGCCACCTGTCCCGAGTCCACCAAACATATTCATCAGCATATCTAAG
                      ____________________________________________________________
consensus             TTGGGTACACCCAAGCCACCTGTCCCGAGTCCACCAAACATATTCATCAGCATATCTAAG
 
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rJMFF001I18-          CCCACATTATCAAGTGAACCTGGTCTGCCACTGTTTGGACCAGTTTCTTGATTTGTCTGC
JMFS135C02+                              CTGGTCTGCCACTGTTTGGACCAGTTTCTTGATTTGTCTGC
                      ____________________________________________________________
consensus             CCCACATTATCAAGTGAACCTGGTCTGCCACTGTTTGGACCAGTTTCTTGATTTGTCTGC
 
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rJMFF001I18-          TGTCGACCCAATTGGGACATAAGTGATTGCTGAAATGTTAACAGTTGCTGCATTGTCTCA
JMFS135C02+           TGTCGACCCAATTGGGACATAAGTGATTGCTGAAATGTTAACAGTTGCTGCATTGTCTCA
                      ____________________________________________________________
consensus             TGTCGACCCAATTGGGACATAAGTGATTGCTGAAATGTTAACAGTTGCTGCATTGTCTCA
 
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rJMFF001I18-          GGGGAAGTCAATTGACGAATGAATTCAGGGTTTTGCATCATCTCTCTCAGTTGGGAATTG
JMFS135C02+           GGGGAAGTCAATTGACGAATGAATTCAGGGTTTTGCATCATCTCTCTCAGTTGGGAATTG
                      ____________________________________________________________
consensus             GGGGAAGTCAATTGACGAATGAATTCAGGGTTTTGCATCATCTCTCTCAGTTGGGAATTG
 
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rJMFF001I18-          GAGTCAAGCATGCTTCGCAGTTGTGGGTTGAGGCCAAGAATCTGGTTCATGTACTGAGGG
JMFS135C02+           GAGTCAAGCATGCTTCGCAGTTGTGGGTTGAGGCCAAGAATCTGGTTCATGTACTGAGGG
                      ____________________________________________________________
consensus             GAGTCAAGCATGCTTCGCAGTTGTGGGTTGAGGCCAAGAATCTGGTTCATGTACTGAGGG
 
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JMFS135C02+           TTGGAGAGCATAGACTGCATCATCTGTGAGATAGCAGGATTCTGCATCAACTGATTTACT
JMFN025C14+            TGGAGAGCATAGACTGCATCATCTGTGAGATAGCAGGATTCTGCATCAACTGATTTACT
                      ____________________________________________________________
consensus             TTGGAGAGCATAGACTGCATCATCTGTGAGATAGCAGGATTCTGCATCAACTGATTTACT
 
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JMFS135C02+           GCATTGGGATCTGGCATACCACCCAGAAGGTCTGGTAAACCAAGTCCACCTAAGCCACCA
JMFN025C14+           GCATTGGGATCTGGCATACCACCCAGAAGGTCTGGTAAACCAAGTCCACCTAAGCCACCA
                      ____________________________________________________________
consensus             GCATTGGGATCTGGCATACCACCCAGAAGGTCTGGTAAACCAAGTCCACCTAAGCCACCA
 
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JMFS135C02+           AGTGGAGCTGCCCTAGCTTCCCCAGCAGGGGTTGACCTAGCGGTGGTATTAGTCTGTTCA
JMFN025C14+           AGTGGAGCTGCCCTAGCTTCCCCAGCAGGGGTTGACCTAGCGGTGGTATTAGTCTGTTCA
                      ____________________________________________________________
consensus             AGTGGAGCTGCCCTAGCTTCCCCAGCAGGGGTTGACCTAGCGGTGGTATTAGTCTGTTCA
 
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JMFS135C02+           GCTCCAGC                                                    
JMFN025C14+           GCTCCAGCTGCAAAATCCAAATAAAGAAAAATGAGGTAATAAAGTAACCAAGAAAACTGA
                      ____________________________________________________________
consensus             GCTCCAGCTGCAAAATCCAAATAAAGAAAAATGAGGTAATAAAGTAACCAAGAAAACTGA
 
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JMFN025C14+           TAAGAGCAGAAAATGCTATTAAAAGCTGTCAATCAATTCAGATATTTATGCTAAATGGAG
                      ____________________________________________________________
consensus             TAAGAGCAGAAAATGCTATTAAAAGCTGTCAATCAATTCAGATATTTATGCTAAATGGAG
 
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JMFN025C14+           CAAGTAGCAATTAAAAATGCAGCAGCAATAAATATCTTTAGACTTTCTCTGATAAATAAT
                      ____________________________________________________________
consensus             CAAGTAGCAATTAAAAATGCAGCAGCAATAAATATCTTTAGACTTTCTCTGATAAATAAT
 
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JMFN025C14+           TTATTTAGACTTCATTGATAATGCAGCATCCAATTCAACATCTCAACTGAAAGTTCAATG
                      ____________________________________________________________
consensus             TTATTTAGACTTCATTGATAATGCAGCATCCAATTCAACATCTCAACTGAAAGTTCAATG
 
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JMFN025C14+           TATCCTGATGATTTCATCAAAAAAACTCTGAAAGCAGAGAAAAATGTGACAAGAGGTAAA
                      ____________________________________________________________
consensus             TATCCTGATGATTTCATCAAAAAAACTCTGAAAGCAGAGAAAAATGTGACAAGAGGTAAA
 
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JMFN025C14+           TTATCAGGGATTGTAGATAGAAAGTCTAGAGCACTTGGCCTCCTCTGAATATCTACAAAT
                      ____________________________________________________________
consensus             TTATCAGGGATTGTAGATAGAAAGTCTAGAGCACTTGGCCTCCTCTGAATATCTACAAAT
 
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JMFN025C14+           GACAGACATGCCAACAGCATCAATACTAATAGTGTATCTCAACTTTTGATACCAAGCTTA
                      ____________________________________________________________
consensus             GACAGACATGCCAACAGCATCAATACTAATAGTGTATCTCAACTTTTGATACCAAGCTTA