Contig 008945:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN011K15Sequence592008945 (2)gb|KHG29399.1|2e-76hypothetical protein F383_12832 [Gossypium arboreum]
JMFN025B17Sequence635008945 (2)ref|XP_010943744.1|8e-120PREDICTED: dihydrolipoyllysine-residue succinyltransferase component of 2-oxogl

Alignment

This contig is upended


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JMFN011K15+                            GGATTGCCAGGAAAACAATGGCAATTAAAATTTTAAATAACGG
                      ____________________________________________________________
consensus                              GGATTGCCAGGAAAACAATGGCAATTAAAATTTTAAATAACGG
 
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JMFN011K15+           CTCCCACTCTGAGTAAGCTATGTTCTAGCAGTATTGAAAATTTTCAGAGCGAGCAACAAT
                      ____________________________________________________________
consensus             CTCCCACTCTGAGTAAGCTATGTTCTAGCAGTATTGAAAATTTTCAGAGCGAGCAACAAT
 
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JMFN011K15+           GTTATCCTACAAAACTTTCGCATAGTTATAGGTTTATTCCTGTTTTGTGCATGTTTAAGT
                      ____________________________________________________________
consensus             GTTATCCTACAAAACTTTCGCATAGTTATAGGTTTATTCCTGTTTTGTGCATGTTTAAGT
 
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JMFN011K15+           GTATTAACTCAGGTATAACACGAGTGTAAGAGATCAAATATCAGAAGTATGCAATCATAC
                      ____________________________________________________________
consensus             GTATTAACTCAGGTATAACACGAGTGTAAGAGATCAAATATCAGAAGTATGCAATCATAC
 
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JMFN011K15+           ATCCAGGAGCAGGCGTCGTGGATCTTCAACCACATCCTTAATCCTTCTCAAAAAGTACAC
JMFN025B17+               AGGAGCAGGCGTCGTGGATCTTCAACCACATCCTTAATCCTTCTCAAAAAGTACAC
                      ____________________________________________________________
consensus             ATCCAGGAGCAGGCGTCGTGGATCTTCAACCACATCCTTAATCCTTCTCAAAAAGTACAC
 
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JMFN011K15+           TGCCTCTCTTCCATCGATCAGCCTGTGATCGTATGTCAGGGCAATGTACATCATTGGCCT
JMFN025B17+           TGCCTCTCTTCCATCGATCAGCCTGTGATCGTATGTCAGGGCAATGTACATCATTGGCCT
                      ____________________________________________________________
consensus             TGCCTCTCTTCCATCGATCAGCCTGTGATCGTATGTCAGGGCAATGTACATCATTGGCCT
 
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JMFN011K15+           GGGAACAATGTTGCCTCCGACAACCATTGGGCGGTTCACTATTGAGTGCATACCCAGGAT
JMFN025B17+           GGGAACAATGTTGCCTCCGACAACCATTGGGCGGTTCACTATTGAGTGCATACCCAGGAT
                      ____________________________________________________________
consensus             GGGAACAATGTTGCCTCCGACAACCATTGGGCGGTTCACTATTGAGTGCATACCCAGGAT
 
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JMFN011K15+           GGCAGACTGAGGGGGATTGATAATCGGGGTACTCAGAAGACTTCCATAGACACCACCATT
JMFN025B17+           GGCAGACTGAGGGGGATTGATAATCGGGGTACTCAGAAGACTTCCATAGACACCACCATT
                      ____________________________________________________________
consensus             GGCAGACTGAGGGGGATTGATAATCGGGGTACTCAGAAGACTTCCATAGACACCACCATT
 
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JMFN011K15+           GGATATTGTGAATGATCCACCAGCCATCTCATCGATTGAGATAGTTCCATTATTTGCCTT
JMFN025B17+           GGATATTGTGAATGATCCACCAGCCATCTCATCGATTGAGATAGTTCCATTATTTGCCTT
                      ____________________________________________________________
consensus             GGATATTGTGAATGATCCACCAGCCATCTCATCGATTGAGATAGTTCCATTATTTGCCTT
 
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JMFN011K15+           TTTAGCAAGTGTGTTCATGGTCTTCTCTATCTCAGCGAAATTCATCTTGTCAGCCTCACG
JMFN025B17+           TTTAGCAAGTGTGTTCATGGTCTTCTCTATCTCAGCGAAATTCATCTTGTCAGCCTCACG
                      ____________________________________________________________
consensus             TTTAGCAAGTGTGTTCATGGTCTTCTCTATCTCAGCGAAATTCATCTTGTCAGCCTCACG
 
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JMFN011K15+           GATAACTGG                                                   
JMFN025B17+           GATAACTGGGACAACAAGGCCCTTTGGTGTACCAACAGCTATACTGATGTCTATGTAGTC
                      ____________________________________________________________
consensus             GATAACTGGGACAACAAGGCCCTTTGGTGTACCAACAGCTATACTGATGTCTATGTAGTC
 
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JMFN025B17+           TCTGTATATAATGTCATCACCATCTATAACTGCATTAACTACTGGCTGATTCTGGAATGC
                      ____________________________________________________________
consensus             TCTGTATATAATGTCATCACCATCTATAACTGCATTAACTACTGGCTGATTCTGGAATGC
 
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JMFN025B17+           ACTAACTGCAGCCTTGATAAACCCAGACATAAGTCCTAGTTTCACTCCATGTTTTTCAAC
                      ____________________________________________________________
consensus             ACTAACTGCAGCCTTGATAAACCCAGACATAAGTCCTAGTTTCACTCCATGTTTTTCAAC
 
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JMFN025B17+           AAAGGCATCCTTGTATTCAGAACGGAGTTTCATCAAATTTGTCATATCAACTTCATTGAA
                      ____________________________________________________________
consensus             AAAGGCATCCTTGTATTCAGAACGGAGTTTCATCAAATTTGTCATATCAACTTCATTGAA